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L3_102_000M1_scaffold_2340

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Displaying 14 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
L3_102_000M1_scaffold_2340_1
Clostridium sp. CAG:226, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

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comp(1..1272)
DNA (1272bp) protein (424aa)
Nucleotidyl transferase n=1 Tax=Clostridium sp. CAG:226 RepID=R5B217_9CLOT
Nucleotidyl transferase {ECO:0000313|EMBL:CCX49590.1}; TaxID=1262781 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium; environmental samples.;" source="Clostridium sp. CAG:226.;"
nucleotidyltransferase
L3_102_000M1_scaffold_2340_2
Clostridium sp. CAG:226, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

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comp(1349..2374)
DNA (1026bp) protein (342aa)
Possible RNA polymerase sigma factor n=1 Tax=Clostridium sp. CAG:226 RepID=R5B5Y1_9CLOT
Possible RNA polymerase sigma factor {ECO:0000313|EMBL:CCX49589.1}; TaxID=1262781 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium; environmental samples.;" source="Clostridium sp. CAG:226.;"
Sensor histidine kinase
L3_102_000M1_scaffold_2340_3
Clostridium sp. CAG:226, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

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comp(2397..3785)
DNA (1389bp) protein (463aa)
ATP-dependent protease ATPase subunit HslU n=1 Tax=Clostridium sp. CAG:226 RepID=R5B2V0_9CLOT
ATP-dependent protease ATPase subunit HslU {ECO:0000313|EMBL:CCX49588.1}; TaxID=1262781 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium; environmental samples.;" source="Clostridium sp. CAG:226.;"
ATP-dependent hsl protease ATP-binding subunit hslU
L3_102_000M1_scaffold_2340_4
Clostridium sp. CAG:138, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

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comp(3782..4315)
DNA (534bp) protein (178aa)
ATP-dependent protease subunit HslV {ECO:0000256|HAMAP-Rule:MF_00248, ECO:0000256|SAAS:SAAS00019556}; EC=3.4.25.2 {ECO:0000256|HAMAP-Rule:MF_00248, ECO:0000256|SAAS:SAAS00019493};; TaxID=1262775 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium; environmental samples.;" source="Clostridium sp. CAG:138.;"
ATP-dependent protease subunit HslV n=1 Tax=Clostridium sp. CAG:138 RepID=R6AWC2_9CLOT
ATP dependent peptidase subunit CodW
L3_102_000M1_scaffold_2340_5
Clostridium sp. CAG:226, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

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comp(4404..5699)
DNA (1296bp) protein (432aa)
Methylenetetrahydrofolate--tRNA-(uracil-5-)-methyltransferase TrmFO {ECO:0000256|HAMAP-Rule:MF_01037}; EC=2.1.1.74 {ECO:0000256|HAMAP-Rule:MF_01037};; Folate-dependent tRNA (uracil-5-)-methyltransferase {ECO:0000256|HAMAP-Rule:MF_01037}; Folate-dependent tRNA(M-5-U54)-methyltransferase {ECO:0000256|HAMAP-Rule:MF_01037}; TaxID=1262781 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium; environmental samples.;" source="Clostridium sp. CAG:226.;"
Methylenetetrahydrofolate--tRNA-(uracil-5-)-methyltransferase TrmFO n=1 Tax=Clostridium sp. CAG:226 RepID=R5BDU6_9CLOT
tRNA:m(5)U-54 methyltransferase
L3_102_000M1_scaffold_2340_6
Clostridium sp. CAG:1024, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

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comp(5696..7798)
DNA (2103bp) protein (701aa)
DNA topoisomerase 1 {ECO:0000256|HAMAP-Rule:MF_00952}; EC=5.99.1.2 {ECO:0000256|HAMAP-Rule:MF_00952};; DNA topoisomerase I {ECO:0000256|HAMAP-Rule:MF_00952}; TaxID=1262770 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium; environmental samples.;" source="Clostridium sp. CAG:1024.;"
DNA topoisomerase I (EC:5.99.1.2)
DNA topoisomerase 1 n=1 Tax=Clostridium sp. CAG:1024 RepID=R5AKI0_9CLOT
L3_102_000M1_scaffold_2340_7
Clostridium sp. CAG:226, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

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comp(7862..8965)
DNA (1104bp) protein (368aa)
DNA protecting protein DprA n=1 Tax=Clostridium sp. CAG:226 RepID=R5B5X6_9CLOT
DNA protecting protein DprA {ECO:0000313|EMBL:CCX49584.1}; TaxID=1262781 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium; environmental samples.;" source="Clostridium sp. CAG:226.;"
DNA protecting protein DprA
L3_102_000M1_scaffold_2340_8
Clostridium sp. CAG:226, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

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comp(8969..10495)
DNA (1527bp) protein (509aa)
Mg chelatase subunit ChlI n=1 Tax=Clostridium sp. CAG:226 RepID=R5B2U6_9CLOT
Mg chelatase subunit ChlI {ECO:0000313|EMBL:CCX49583.1}; TaxID=1262781 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium; environmental samples.;" source="Clostridium sp. CAG:226.;"
Mg chelatase subunit ChlI
L3_102_000M1_scaffold_2340_9
Bacillus megaterium, Bacillus, Bacillales, Bacilli, Firmicutes, Bacteria

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comp(10534..10944)
DNA (411bp) protein (137aa)
GtrA-like protein n=1 Tax=Bacillus megaterium WSH-002 RepID=G2RR86_BACME
yngA; GtrA-like protein
GtrA-like protein {ECO:0000313|EMBL:AEN90022.1}; TaxID=1006007 species="Bacteria; Firmicutes; Bacilli; Bacillales; Bacillaceae; Bacillus.;" source="Bacillus megaterium WSH-002.;"
L3_102_000M1_scaffold_2340_10
Clostridium sp. CAG:226, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

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comp(10947..14615)
DNA (3669bp) protein (1223aa)
Glycosyl transferase family 39 n=1 Tax=Clostridium sp. CAG:226 RepID=R5BDU3_9CLOT
Glycosyl transferase family 39 {ECO:0000313|EMBL:CCX49581.1}; TaxID=1262781 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium; environmental samples.;" source="Clostridium sp. CAG:226.;"
glycosyl transferase family protein
L3_102_000M1_scaffold_2340_11
Clostridium sp. CAG:226, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

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comp(14725..15084)
DNA (360bp) protein (120aa)
UPF0102 protein BN545_01020 n=1 Tax=Clostridium sp. CAG:226 RepID=R5B209_9CLOT
UPF0102 protein BN545_01020 {ECO:0000256|HAMAP-Rule:MF_00048}; TaxID=1262781 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium; environmental samples.;" source="Clostridium sp. CAG:226.;"
hypothetical protein
L3_102_000M1_scaffold_2340_12
Clostridium sp. CAG:226, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(15089..15718)
DNA (630bp) protein (210aa)
Ribonuclease HII {ECO:0000256|HAMAP-Rule:MF_00052, ECO:0000256|SAAS:SAAS00016879}; Short=RNase HII {ECO:0000256|HAMAP-Rule:MF_00052};; EC=3.1.26.4 {ECO:0000256|HAMAP-Rule:MF_00052, ECO:0000256|SAAS:SAAS00016872};; TaxID=1262781 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium; environmental samples.;" source="Clostridium sp. CAG:226.;"
Ribonuclease HII (EC:3.1.26.4)
Ribonuclease HII n=1 Tax=Clostridium sp. CAG:226 RepID=R5B5X1_9CLOT
L3_102_000M1_scaffold_2340_13
Clostridium sp. CAG:226, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

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comp(15702..16568)
DNA (867bp) protein (289aa)
Ribosome biogenesis GTPase A n=1 Tax=Clostridium sp. CAG:226 RepID=R5B2U2_9CLOT
Ribosome biogenesis GTPase A {ECO:0000256|PIRNR:PIRNR006230}; TaxID=1262781 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium; environmental samples.;" source="Clostridium sp. CAG:226.;"
ribosome biogenesis GTP-binding protein YlqF
L3_102_000M1_scaffold_2340_14
butyrate-producing bacterium SS3/4, Clostridiales, Clostridia, Firmicutes, Bacteria

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comp(16667..16783)
DNA (117bp) protein (39aa)
Putative uncharacterized protein n=1 Tax=butyrate-producing bacterium SS3/4 RepID=D7GT56_9FIRM
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:CBL40998.1}; TaxID=245014 species="Bacteria; Firmicutes; Clostridia; Clostridiales.;" source="butyrate-producing bacterium SS3/4.;"
Displaying 14 items

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