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L3_102_000M1_scaffold_2907

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Displaying 15 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
L3_102_000M1_scaffold_2907_1
unknown

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comp(70..198)
DNA (129bp) protein (43aa)

This feature has no annotations

L3_102_000M1_scaffold_2907_2
Clostridium sp. CAG:277, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

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comp(213..2420)
DNA (2208bp) protein (736aa)
Polyphosphate kinase {ECO:0000256|HAMAP-Rule:MF_00347, ECO:0000256|RuleBase:RU003800}; EC=2.7.4.1 {ECO:0000256|HAMAP-Rule:MF_00347, ECO:0000256|RuleBase:RU003800};; ATP-polyphosphate phosphotransferase {ECO:0000256|HAMAP-Rule:MF_00347}; Polyphosphoric acid kinase {ECO:0000256|HAMAP-Rule:MF_00347}; TaxID=1262790 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium; environmental samples.;" source="Clostridium sp. CAG:277.;"
Polyphosphate kinase (EC:2.7.4.1)
Polyphosphate kinase n=1 Tax=Clostridium sp. CAG:277 RepID=R7JX75_9CLOT
L3_102_000M1_scaffold_2907_3
Roseburia sp. CAG:380, Roseburia, Clostridiales, Clostridia, Firmicutes, Bacteria

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comp(2413..4176)
DNA (1764bp) protein (588aa)
Exopolyphosphatase (EC:3.6.1.11)
Ppx/GppA phosphatase family protein n=1 Tax=Roseburia sp. CAG:380 RepID=R6V7W2_9FIRM
Ppx/GppA phosphatase family protein {ECO:0000313|EMBL:CDC93185.1}; TaxID=1262946 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Roseburia; environmental samples.;" source="Roseburia sp. CAG:380.;"
L3_102_000M1_scaffold_2907_4
Roseburia sp. CAG:380, Roseburia, Clostridiales, Clostridia, Firmicutes, Bacteria

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4285..5310
DNA (1026bp) protein (342aa)
S-adenosylmethionine:tRNA ribosyltransferase-isomerase {ECO:0000256|HAMAP-Rule:MF_00113, ECO:0000256|SAAS:SAAS00094456}; EC=2.4.99.17 {ECO:0000256|HAMAP-Rule:MF_00113, ECO:0000256|SAAS:SAAS00094434};; Queuosine biosynthesis protein QueA {ECO:0000256|HAMAP-Rule:MF_00113}; TaxID=1262946 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Roseburia; environmental samples.;" source="Roseburia sp. CAG:380.;"
S-adenosylmethionine--tRNA ribosyltransferase-isomerase (EC:5.-.-.-)
S-adenosylmethionine:tRNA ribosyltransferase-isomerase n=1 Tax=Roseburia sp. CAG:380 RepID=R6VLX2_9FIRM
L3_102_000M1_scaffold_2907_5
Roseburia sp. CAG:380, Roseburia, Clostridiales, Clostridia, Firmicutes, Bacteria

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5310..6305
DNA (996bp) protein (332aa)
Uncharacterized protein n=1 Tax=Roseburia sp. CAG:380 RepID=R6WG66_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:CDC93187.1}; TaxID=1262946 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Roseburia; environmental samples.;" source="Roseburia sp. CAG:380.;"
putative lipid kinase
L3_102_000M1_scaffold_2907_6
Roseburia sp. CAG:380, Roseburia, Clostridiales, Clostridia, Firmicutes, Bacteria

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comp(6396..7154)
DNA (759bp) protein (253aa)
Peptidoglycan binding domain-containing protein n=1 Tax=Roseburia sp. CAG:380 RepID=R6V4Q8_9FIRM
Peptidoglycan binding domain-containing protein {ECO:0000313|EMBL:CDC93188.1}; TaxID=1262946 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Roseburia; environmental samples.;" source="Roseburia sp. CAG:380.;"
Putative peptidoglycan binding domain.
L3_102_000M1_scaffold_2907_7
Roseburia sp. CAG:380, Roseburia, Clostridiales, Clostridia, Firmicutes, Bacteria

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7172..8476
DNA (1305bp) protein (435aa)
Uncharacterized protein n=1 Tax=Roseburia sp. CAG:380 RepID=R6V7W6_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:CDC93190.1}; TaxID=1262946 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Roseburia; environmental samples.;" source="Roseburia sp. CAG:380.;"
hypothetical protein
L3_102_000M1_scaffold_2907_8
Clostridium sp. CAG:277, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

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8493..9176
DNA (684bp) protein (228aa)
Uncharacterized protein n=1 Tax=Clostridium sp. CAG:277 RepID=R7JY94_9CLOT
Uncharacterized protein {ECO:0000313|EMBL:CDE68626.1}; TaxID=1262790 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium; environmental samples.;" source="Clostridium sp. CAG:277.;"
hypothetical protein
L3_102_000M1_scaffold_2907_9
Eubacterium sp. CAG:146, Eubacterium, Clostridiales, Clostridia, Firmicutes, Bacteria

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9192..10079
DNA (888bp) protein (296aa)
Hydrolase alpha/beta domain protein n=1 Tax=Eubacterium sp. CAG:146 RepID=R5GEC3_9FIRM
Hydrolase alpha/beta domain protein {ECO:0000313|EMBL:CCY14294.1}; TaxID=1262879 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Eubacteriaceae; Eubacterium; environmental samples.;" source="Eubacterium sp. CAG:146.;"
putative acetyl-hydrolase
L3_102_000M1_scaffold_2907_10
Roseburia sp. CAG:380, Roseburia, Clostridiales, Clostridia, Firmicutes, Bacteria

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10274..10456
DNA (183bp) protein (61aa)
Uncharacterized protein n=1 Tax=Roseburia sp. CAG:380 RepID=R6VQQ3_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:CDC96589.1}; TaxID=1262946 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Roseburia; environmental samples.;" source="Roseburia sp. CAG:380.;"
L3_102_000M1_scaffold_2907_11
Roseburia sp. CAG:380, Roseburia, Clostridiales, Clostridia, Firmicutes, Bacteria

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10453..11601
DNA (1149bp) protein (383aa)
Uncharacterized protein n=1 Tax=Roseburia sp. CAG:380 RepID=R6VI36_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:CDC96590.1}; TaxID=1262946 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Roseburia; environmental samples.;" source="Roseburia sp. CAG:380.;"
Site-specific recombinases, DNA invertase Pin homologs
L3_102_000M1_scaffold_2907_12
unknown

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11651..11797
DNA (147bp) protein (49aa)

This feature has no annotations

L3_102_000M1_scaffold_2907_13
Roseburia sp. CAG:380, Roseburia, Clostridiales, Clostridia, Firmicutes, Bacteria

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11758..12606
DNA (849bp) protein (283aa)
Putative site-specific recombinase n=1 Tax=Roseburia sp. CAG:380 RepID=R6WR73_9FIRM
Putative site-specific recombinase {ECO:0000313|EMBL:CDC96592.1}; TaxID=1262946 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Roseburia; environmental samples.;" source="Roseburia sp. CAG:380.;"
Site-specific recombinases, DNA invertase Pin homologs
L3_102_000M1_scaffold_2907_14
Roseburia sp. CAG:380, Roseburia, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(12574..13080)
DNA (507bp) protein (169aa)
Uncharacterized protein n=1 Tax=Roseburia sp. CAG:380 RepID=R6VE75_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:CDC96593.1}; TaxID=1262946 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Roseburia; environmental samples.;" source="Roseburia sp. CAG:380.;"
Stage II sporulation protein.
L3_102_000M1_scaffold_2907_15
Roseburia sp. CAG:380, Roseburia, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

13239..13673
DNA (435bp) protein (145aa)
DeoxyUTP pyrophosphatase n=1 Tax=Roseburia sp. CAG:380 RepID=R6VQQ6_9FIRM
DeoxyUTP pyrophosphatase {ECO:0000313|EMBL:CDC96594.1}; TaxID=1262946 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Roseburia; environmental samples.;" source="Roseburia sp. CAG:380.;"
deoxyUTP pyrophosphatase
Displaying 15 items

View Taxonomy