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L3_102_000M1_scaffold_1590

Search features with annotation key words

Displaying items 1-30 of 33 in total
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
L3_102_000M1_scaffold_1590_1
Roseburia sp. CAG:380, Roseburia, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(413..922)
DNA (510bp) protein (170aa)
Uncharacterized protein n=1 Tax=Roseburia sp. CAG:380 RepID=R6VWN8_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:CDC96441.1}; TaxID=1262946 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Roseburia; environmental samples.;" source="Roseburia sp. CAG:380.;"
L3_102_000M1_scaffold_1590_2
Roseburia sp. CAG:380, Roseburia, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(1000..2967)
DNA (1968bp) protein (656aa)
Secreted protein containing C-terminal beta-propeller domain distantly related to WD-40 repeats n=1 Tax=Roseburia sp. CAG:380 RepID=R6VHL2_9FIRM
Secreted protein containing C-terminal beta-propeller domain distantly related to WD-40 repeats {ECO:0000313|EMBL:CDC96440.1}; TaxID=1262946 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Roseburia; environmental samples.;" source="Roseburia sp. CAG:380.;"
Secreted protein containing C-terminal beta-propeller domain distantly related to WD-40 repeats
L3_102_000M1_scaffold_1590_3
Roseburia sp. CAG:380, Roseburia, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(3119..3862)
DNA (744bp) protein (248aa)
Phosphoglycerate mutase n=1 Tax=Roseburia sp. CAG:380 RepID=R6VDR4_9FIRM
Phosphoglycerate mutase {ECO:0000313|EMBL:CDC96438.1}; TaxID=1262946 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Roseburia; environmental samples.;" source="Roseburia sp. CAG:380.;"
phosphoglycerate mutase
L3_102_000M1_scaffold_1590_4
Roseburia sp. CAG:380, Roseburia, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(4102..5046)
DNA (945bp) protein (315aa)
Transketolase, C-terminal subunit (EC:2.2.1.1)
Uncharacterized protein n=1 Tax=Roseburia sp. CAG:380 RepID=R6WQM6_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:CDC96437.1}; TaxID=1262946 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Roseburia; environmental samples.;" source="Roseburia sp. CAG:380.;"
L3_102_000M1_scaffold_1590_5
Roseburia sp. CAG:380, Roseburia, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(5059..5889)
DNA (831bp) protein (277aa)
Transketolase, N-terminal subunit (EC:2.2.1.1)
Uncharacterized protein n=1 Tax=Roseburia sp. CAG:380 RepID=R6VWN3_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:CDC96436.1}; TaxID=1262946 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Roseburia; environmental samples.;" source="Roseburia sp. CAG:380.;"
L3_102_000M1_scaffold_1590_6
Roseburia sp. CAG:380, Roseburia, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(5950..6606)
DNA (657bp) protein (219aa)
Probable transaldolase {ECO:0000256|HAMAP-Rule:MF_00494}; EC=2.2.1.2 {ECO:0000256|HAMAP-Rule:MF_00494};; TaxID=1262946 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Roseburia; environmental samples.;" source="Roseburia sp. CAG:380.;"
Probable transaldolase n=1 Tax=Roseburia sp. CAG:380 RepID=R6VHK7_9FIRM
transaldolase
L3_102_000M1_scaffold_1590_7
Roseburia sp. CAG:380, Roseburia, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(6730..8532)
DNA (1803bp) protein (601aa)
Uncharacterized protein n=1 Tax=Roseburia sp. CAG:380 RepID=R6VQA3_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:CDC96434.1}; TaxID=1262946 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Roseburia; environmental samples.;" source="Roseburia sp. CAG:380.;"
hypothetical protein
L3_102_000M1_scaffold_1590_8
Roseburia sp. CAG:380, Roseburia, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(8504..8689)
DNA (186bp) protein (62aa)
Putative acyl-CoA thioesterase n=1 Tax=Roseburia sp. CAG:380 RepID=R6WQM1_9FIRM
Putative acyl-CoA thioesterase {ECO:0000313|EMBL:CDC96432.1}; TaxID=1262946 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Roseburia; environmental samples.;" source="Roseburia sp. CAG:380.;"
yneP; putative acyl-CoA thioesterase
L3_102_000M1_scaffold_1590_9
Roseburia sp. CAG:380, Roseburia, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

9044..10873
DNA (1830bp) protein (610aa)
ATPase components of ABC transporters with duplicated ATPase domains n=1 Tax=Roseburia sp. CAG:380 RepID=R6VHK2_9FIRM
ATPase components of ABC transporters with duplicated ATPase domains {ECO:0000313|EMBL:CDC96430.1}; TaxID=1262946 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Roseburia; environmental samples.;" source="Roseburia sp. CAG:380.;"
ATPase components of ABC transporters with duplicated ATPase domains
L3_102_000M1_scaffold_1590_10
Clostridium sp. CAG:277, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

10993..11193
DNA (201bp) protein (67aa)
Cold-shock DNA-binding domain protein n=2 Tax=Clostridiales RepID=R6WQL2_9FIRM
Cold-shock DNA-binding domain protein {ECO:0000313|EMBL:CDE70511.1}; TaxID=1262790 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium; environmental samples.;" source="Clostridium sp. CAG:277.;"
cold-shock DNA-binding domain-containing protein
L3_102_000M1_scaffold_1590_11
Roseburia sp. CAG:380, Roseburia, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(11351..12808)
DNA (1458bp) protein (486aa)
alpha-L-fucosidase (EC:3.2.1.51)
Alpha-L-fucosidase n=1 Tax=Roseburia sp. CAG:380 RepID=R6VHJ7_9FIRM
Alpha-L-fucosidase {ECO:0000313|EMBL:CDC96425.1}; TaxID=1262946 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Roseburia; environmental samples.;" source="Roseburia sp. CAG:380.;"
L3_102_000M1_scaffold_1590_12
Roseburia sp. CAG:380, Roseburia, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(12830..13057)
DNA (228bp) protein (76aa)
Uncharacterized protein n=1 Tax=Roseburia sp. CAG:380 RepID=R6VDP8_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:CDC96423.1}; TaxID=1262946 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Roseburia; environmental samples.;" source="Roseburia sp. CAG:380.;"
hypothetical protein
L3_102_000M1_scaffold_1590_13
Roseburia sp. CAG:380, Roseburia, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(13079..14314)
DNA (1236bp) protein (412aa)
Collagenase and related proteases (EC:3.4.-.-)
Collagenase and related proteases n=1 Tax=Roseburia sp. CAG:380 RepID=R6WQK5_9FIRM
Collagenase and related proteases {ECO:0000313|EMBL:CDC96422.1}; TaxID=1262946 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Roseburia; environmental samples.;" source="Roseburia sp. CAG:380.;"
L3_102_000M1_scaffold_1590_14
Roseburia sp. CAG:380, Roseburia, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(14326..14979)
DNA (654bp) protein (218aa)
Uncharacterized protein n=1 Tax=Roseburia sp. CAG:380 RepID=R6VWL7_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:CDC96421.1}; TaxID=1262946 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Roseburia; environmental samples.;" source="Roseburia sp. CAG:380.;"
O-methyltransferase
L3_102_000M1_scaffold_1590_15
Roseburia sp. CAG:380, Roseburia, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(14976..15347)
DNA (372bp) protein (124aa)
Uncharacterized protein n=1 Tax=Roseburia sp. CAG:380 RepID=R6VHJ2_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:CDC96420.1}; TaxID=1262946 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Roseburia; environmental samples.;" source="Roseburia sp. CAG:380.;"
L3_102_000M1_scaffold_1590_16
Roseburia sp. CAG:380, Roseburia, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(15340..15684)
DNA (345bp) protein (115aa)
Uncharacterized protein n=1 Tax=Roseburia sp. CAG:380 RepID=R6VQ88_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:CDC96419.1}; TaxID=1262946 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Roseburia; environmental samples.;" source="Roseburia sp. CAG:380.;"
L3_102_000M1_scaffold_1590_17
Roseburia sp. CAG:380, Roseburia, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(15688..17619)
DNA (1932bp) protein (644aa)
Beta-lactamase domain protein n=1 Tax=Roseburia sp. CAG:380 RepID=R6VDP3_9FIRM
Beta-lactamase domain protein {ECO:0000313|EMBL:CDC96418.1}; TaxID=1262946 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Roseburia; environmental samples.;" source="Roseburia sp. CAG:380.;"
beta-lactamase domain-containing protein
L3_102_000M1_scaffold_1590_18
Roseburia sp. CAG:380, Roseburia, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(17741..18001)
DNA (261bp) protein (87aa)
Uncharacterized protein n=1 Tax=Roseburia sp. CAG:380 RepID=R6WQJ7_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:CDC96417.1}; TaxID=1262946 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Roseburia; environmental samples.;" source="Roseburia sp. CAG:380.;"
hypothetical protein
L3_102_000M1_scaffold_1590_19
Roseburia sp. CAG:380, Roseburia, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(18017..18535)
DNA (519bp) protein (173aa)
Putative Holliday junction resolvase {ECO:0000256|HAMAP-Rule:MF_00651, ECO:0000256|SAAS:SAAS00086483}; EC=3.1.-.- {ECO:0000256|HAMAP-Rule:MF_00651, ECO:0000256|SAAS:SAAS00086510};; TaxID=1262946 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Roseburia; environmental samples.;" source="Roseburia sp. CAG:380.;"
Putative Holliday junction resolvase n=1 Tax=Roseburia sp. CAG:380 RepID=R6VWL0_9FIRM
hypothetical protein
L3_102_000M1_scaffold_1590_20
Roseburia sp. CAG:380, Roseburia, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(18595..18855)
DNA (261bp) protein (87aa)
UPF0297 protein BN635_00377 n=2 Tax=Clostridiales RepID=R6VHI6_9FIRM
UPF0297 protein BN635_00377 {ECO:0000256|HAMAP-Rule:MF_01507}; TaxID=1262946 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Roseburia; environmental samples.;" source="Roseburia sp. CAG:380.;"
hypothetical protein
L3_102_000M1_scaffold_1590_21
Roseburia sp. CAG:380, Roseburia, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(18916..20382)
DNA (1467bp) protein (489aa)
MiaB-like tRNA modifying enzyme (EC:1.3.1.74)
MiaB-like tRNA modifying enzyme n=1 Tax=Roseburia sp. CAG:380 RepID=R6VDN5_9FIRM
MiaB-like tRNA modifying enzyme {ECO:0000313|EMBL:CDC96413.1}; TaxID=1262946 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Roseburia; environmental samples.;" source="Roseburia sp. CAG:380.;"
L3_102_000M1_scaffold_1590_22
Roseburia sp. CAG:380, Roseburia, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

20477..20710
DNA (234bp) protein (78aa)
PTS HPr component phosphorylation site n=2 Tax=Clostridiales RepID=R6VWK4_9FIRM
PTS HPr component phosphorylation site {ECO:0000313|EMBL:CDC96411.1}; TaxID=1262946 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Roseburia; environmental samples.;" source="Roseburia sp. CAG:380.;"
PTS HPr component phosphorylation site.
L3_102_000M1_scaffold_1590_23
Roseburia sp. CAG:380, Roseburia, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(20812..21993)
DNA (1182bp) protein (394aa)
Probable tRNA sulfurtransferase {ECO:0000256|HAMAP-Rule:MF_00021, ECO:0000256|SAAS:SAAS00094284}; EC=2.8.1.4 {ECO:0000256|HAMAP-Rule:MF_00021, ECO:0000256|SAAS:SAAS00094270};; Sulfur carrier protein ThiS sulfurtransferase {ECO:0000256|HAMAP-Rule:MF_00021}; Thiamine biosynthesis protein ThiI {ECO:0000256|HAMAP-Rule:MF_00021}; tRNA 4-thiouridine synthase {ECO:0000256|HAMAP-Rule:MF_00021}; TaxID=1262946 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Roseburia; environmental samples.;" source="Roseburia sp. CAG:380.;"
Probable tRNA sulfurtransferase n=1 Tax=Roseburia sp. CAG:380 RepID=R6VDN0_9FIRM
thiamine biosynthesis ATP pyrophosphatase
L3_102_000M1_scaffold_1590_24
Roseburia sp. CAG:380, Roseburia, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(22069..23232)
DNA (1164bp) protein (388aa)
Cysteine sulfinate desulfinase/cysteine desulfurase and related enzymes (EC:2.8.1.7)
Uncharacterized protein n=1 Tax=Roseburia sp. CAG:380 RepID=R6VWJ3_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:CDC96401.1}; TaxID=1262946 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Roseburia; environmental samples.;" source="Roseburia sp. CAG:380.;"
L3_102_000M1_scaffold_1590_25
Clostridium sp. CAG:277, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(23242..23982)
DNA (741bp) protein (247aa)
Ribosomal RNA small subunit methyltransferase E {ECO:0000256|PIRNR:PIRNR015601}; EC=2.1.1.193 {ECO:0000256|PIRNR:PIRNR015601};; TaxID=1262790 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium; environmental samples.;" source="Clostridium sp. CAG:277.;"
Ribosomal RNA small subunit methyltransferase E n=1 Tax=Clostridium sp. CAG:277 RepID=R7JY33_9CLOT
hypothetical protein
L3_102_000M1_scaffold_1590_26
Roseburia sp. CAG:380, Roseburia, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(24330..25079)
DNA (750bp) protein (250aa)
Uncharacterized protein n=1 Tax=Roseburia sp. CAG:380 RepID=R6VDL9_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:CDC96398.1}; TaxID=1262946 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Roseburia; environmental samples.;" source="Roseburia sp. CAG:380.;"
hypothetical protein
L3_102_000M1_scaffold_1590_27
Roseburia sp. CAG:380, Roseburia, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(25240..27141)
DNA (1902bp) protein (634aa)
UPF0313 protein BN635_00370 n=1 Tax=Roseburia sp. CAG:380 RepID=R6VQ65_9FIRM
UPF0313 protein BN635_00370 {ECO:0000256|HAMAP-Rule:MF_01251}; TaxID=1262946 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Roseburia; environmental samples.;" source="Roseburia sp. CAG:380.;"
Fe-S oxidoreductase
L3_102_000M1_scaffold_1590_28
Roseburia sp. CAG:380, Roseburia, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

27256..28050
DNA (795bp) protein (265aa)
HAD-superfamily hydrolase subfamily IIB n=1 Tax=Roseburia sp. CAG:380 RepID=R6VHF6_9FIRM
HAD-superfamily hydrolase subfamily IIB {ECO:0000313|EMBL:CDC96390.1}; TaxID=1262946 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Roseburia; environmental samples.;" source="Roseburia sp. CAG:380.;"
HAD-superfamily hydrolase
L3_102_000M1_scaffold_1590_29
Roseburia sp. CAG:380, Roseburia, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(28042..28695)
DNA (654bp) protein (218aa)
Uncharacterized protein n=1 Tax=Roseburia sp. CAG:380 RepID=R6VWH3_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:CDC96386.1}; TaxID=1262946 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Roseburia; environmental samples.;" source="Roseburia sp. CAG:380.;"
hypothetical protein
L3_102_000M1_scaffold_1590_30
Roseburia sp. CAG:380, Roseburia, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(28682..29737)
DNA (1056bp) protein (352aa)
Aldose 1-epimerase {ECO:0000256|PIRNR:PIRNR005096}; EC=5.1.3.3 {ECO:0000256|PIRNR:PIRNR005096};; Galactose mutarotase {ECO:0000256|PIRNR:PIRNR005096}; TaxID=1262946 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Roseburia; environmental samples.;" source="Roseburia sp. CAG:380.;"
aldose 1-epimerase (EC:5.1.3.3)
Aldose 1-epimerase n=1 Tax=Roseburia sp. CAG:380 RepID=R6VQ41_9FIRM
Displaying items 1-30 of 33 in total

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