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L3_102_000M1_scaffold_29

Search features with annotation key words

Displaying items 1-30 of 129 in total
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
L3_102_000M1_scaffold_29_1
Clostridium sp. CAG:277, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(2..736)
DNA (735bp) protein (245aa)
Dihydroorotase {ECO:0000256|HAMAP-Rule:MF_00220, ECO:0000256|SAAS:SAAS00252556}; Short=DHOase {ECO:0000256|HAMAP-Rule:MF_00220};; EC=3.5.2.3 {ECO:0000256|HAMAP-Rule:MF_00220};; TaxID=1262790 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium; environmental samples.;" source="Clostridium sp. CAG:277.;"
dihydroorotase, multifunctional complex type (EC:3.5.2.3)
Dihydroorotase n=1 Tax=Clostridium sp. CAG:277 RepID=R7K3N6_9CLOT
L3_102_000M1_scaffold_29_2
Roseburia sp. CAG:380, Roseburia, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(808..1212)
DNA (405bp) protein (135aa)
NUDIX hydrolase n=1 Tax=Roseburia sp. CAG:380 RepID=R6VKX6_9FIRM
NUDIX hydrolase {ECO:0000313|EMBL:CDC92866.1}; TaxID=1262946 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Roseburia; environmental samples.;" source="Roseburia sp. CAG:380.;"
NUDIX hydrolase
L3_102_000M1_scaffold_29_3
Roseburia sp. CAG:380, Roseburia, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(1280..2377)
DNA (1098bp) protein (366aa)
aspartate-semialdehyde dehydrogenase (non-peptidoglycan organisms) (EC:1.2.1.11)
Aspartate-semialdehyde dehydrogenase n=1 Tax=Roseburia sp. CAG:380 RepID=R6WF95_9FIRM
Aspartate-semialdehyde dehydrogenase {ECO:0000313|EMBL:CDC92867.1}; TaxID=1262946 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Roseburia; environmental samples.;" source="Roseburia sp. CAG:380.;"
L3_102_000M1_scaffold_29_4
Roseburia sp. CAG:380, Roseburia, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists


2574..3815
DNA (1242bp) protein (414aa)
Histidine--tRNA ligase n=1 Tax=Roseburia sp. CAG:380 RepID=R6V3W3_9FIRM
Histidine--tRNA ligase {ECO:0000313|EMBL:CDC92868.1}; TaxID=1262946 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Roseburia; environmental samples.;" source="Roseburia sp. CAG:380.;"
histidyl-tRNA synthetase
L3_102_000M1_scaffold_29_5
Roseburia sp. CAG:380, Roseburia, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(3967..6675)
DNA (2709bp) protein (903aa)
Diguanylate cyclase (GGDEF) domain n=1 Tax=Roseburia sp. CAG:380 RepID=R6VES4_9FIRM
Diguanylate cyclase (GGDEF) domain {ECO:0000313|EMBL:CDC92869.1}; TaxID=1262946 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Roseburia; environmental samples.;" source="Roseburia sp. CAG:380.;"
diguanylate cyclase (GGDEF) domain
L3_102_000M1_scaffold_29_6
Roseburia sp. CAG:380, Roseburia, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(6719..7558)
DNA (840bp) protein (280aa)
Uncharacterized protein n=1 Tax=Roseburia sp. CAG:380 RepID=R6V707_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:CDC92870.1}; TaxID=1262946 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Roseburia; environmental samples.;" source="Roseburia sp. CAG:380.;"
hypothetical protein DUF3737
L3_102_000M1_scaffold_29_7
Roseburia sp. CAG:380, Roseburia, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(7676..9118)
DNA (1443bp) protein (481aa)
Putative efflux protein MATE family n=1 Tax=Roseburia sp. CAG:380 RepID=R6VKY4_9FIRM
Putative efflux protein MATE family {ECO:0000313|EMBL:CDC92871.1}; TaxID=1262946 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Roseburia; environmental samples.;" source="Roseburia sp. CAG:380.;"
MATE efflux family protein
L3_102_000M1_scaffold_29_8
Roseburia sp. CAG:380, Roseburia, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(9124..10305)
DNA (1182bp) protein (394aa)
Bifunctional PLP-dependent enzyme with beta-cystathionase and maltose regulon repressor activities (EC:2.6.1.-)
Putative aminotransferase B n=1 Tax=Roseburia sp. CAG:380 RepID=R6WFA0_9FIRM
Putative aminotransferase B {ECO:0000313|EMBL:CDC92872.1}; TaxID=1262946 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Roseburia; environmental samples.;" source="Roseburia sp. CAG:380.;"
L3_102_000M1_scaffold_29_9
Roseburia sp. CAG:380, Roseburia, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(10323..11336)
DNA (1014bp) protein (338aa)
Uncharacterized protein n=1 Tax=Roseburia sp. CAG:380 RepID=R6V713_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:CDC92875.1}; TaxID=1262946 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Roseburia; environmental samples.;" source="Roseburia sp. CAG:380.;"
L3_102_000M1_scaffold_29_10
Roseburia sp. CAG:380, Roseburia, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(11415..12698)
DNA (1284bp) protein (428aa)
Uncharacterized protein n=1 Tax=Roseburia sp. CAG:380 RepID=R6WFA4_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:CDC92877.1}; TaxID=1262946 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Roseburia; environmental samples.;" source="Roseburia sp. CAG:380.;"
O-acetylhomoserine (thiol)-lyase
L3_102_000M1_scaffold_29_11
Roseburia sp. CAG:380, Roseburia, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

12984..14333
DNA (1350bp) protein (450aa)
Uncharacterized protein n=1 Tax=Roseburia sp. CAG:380 RepID=R6V3X6_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:CDC92878.1}; TaxID=1262946 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Roseburia; environmental samples.;" source="Roseburia sp. CAG:380.;"
hypothetical protein
L3_102_000M1_scaffold_29_12
Roseburia sp. CAG:380, Roseburia, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(14530..16014)
DNA (1485bp) protein (495aa)
Uncharacterized protein n=1 Tax=Roseburia sp. CAG:380 RepID=R6VET7_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:CDC92879.1}; TaxID=1262946 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Roseburia; environmental samples.;" source="Roseburia sp. CAG:380.;"
hypothetical protein
L3_102_000M1_scaffold_29_13
Roseburia sp. CAG:380, Roseburia, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(16206..16859)
DNA (654bp) protein (218aa)
Phosphoglycolate phosphatase n=1 Tax=Roseburia sp. CAG:380 RepID=R6V719_9FIRM
Phosphoglycolate phosphatase {ECO:0000313|EMBL:CDC92880.1}; TaxID=1262946 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Roseburia; environmental samples.;" source="Roseburia sp. CAG:380.;"
phosphoglycolate phosphatase
L3_102_000M1_scaffold_29_14
Roseburia sp. CAG:380, Roseburia, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(17046..17654)
DNA (609bp) protein (203aa)
Uncharacterized protein n=1 Tax=Roseburia sp. CAG:380 RepID=R6VKZ6_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:CDC92881.1}; TaxID=1262946 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Roseburia; environmental samples.;" source="Roseburia sp. CAG:380.;"
hypothetical protein
L3_102_000M1_scaffold_29_15
Roseburia sp. CAG:380, Roseburia, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(17872..18507)
DNA (636bp) protein (212aa)
Endonuclease III {ECO:0000256|HAMAP-Rule:MF_00942, ECO:0000256|PIRNR:PIRNR001435}; EC=4.2.99.18 {ECO:0000256|HAMAP-Rule:MF_00942, ECO:0000256|PIRNR:PIRNR001435};; DNA-(apurinic or apyrimidinic site) lyase {ECO:0000256|HAMAP-Rule:MF_00942}; TaxID=1262946 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Roseburia; environmental samples.;" source="Roseburia sp. CAG:380.;"
Predicted EndoIII-related endonuclease (EC:4.2.99.18)
Endonuclease III n=1 Tax=Roseburia sp. CAG:380 RepID=R6WFB0_9FIRM
L3_102_000M1_scaffold_29_16
Roseburia sp. CAG:380, Roseburia, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(18599..19204)
DNA (606bp) protein (202aa)
Cytidylate kinase n=1 Tax=Roseburia sp. CAG:380 RepID=R6V3Y1_9FIRM
Cytidylate kinase {ECO:0000313|EMBL:CDC92883.1}; TaxID=1262946 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Roseburia; environmental samples.;" source="Roseburia sp. CAG:380.;"
cytidylate kinase
L3_102_000M1_scaffold_29_17
Roseburia sp. CAG:380, Roseburia, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(19256..19678)
DNA (423bp) protein (141aa)
DNA-repair protein n=1 Tax=Roseburia sp. CAG:380 RepID=R6V725_9FIRM
DNA-repair protein {ECO:0000313|EMBL:CDC92885.1}; TaxID=1262946 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Roseburia; environmental samples.;" source="Roseburia sp. CAG:380.;"
hypothetical protein
L3_102_000M1_scaffold_29_18
Roseburia sp. CAG:380, Roseburia, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(19675..21195)
DNA (1521bp) protein (507aa)
UMUC domain protein DNA-repair protein n=1 Tax=Roseburia sp. CAG:380 RepID=R6V3Y4_9FIRM
UMUC domain protein DNA-repair protein {ECO:0000313|EMBL:CDC92888.1}; TaxID=1262946 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Roseburia; environmental samples.;" source="Roseburia sp. CAG:380.;"
DNA-repair protein
L3_102_000M1_scaffold_29_19
Clostridium sp. CAG:277, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(21248..23290)
DNA (2043bp) protein (681aa)
Efflux ABC transporter permease protein n=1 Tax=Clostridium sp. CAG:277 RepID=R7K053_9CLOT
Efflux ABC transporter permease protein {ECO:0000313|EMBL:CDE69655.1}; TaxID=1262790 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium; environmental samples.;" source="Clostridium sp. CAG:277.;"
hypothetical protein
L3_102_000M1_scaffold_29_20
Clostridium sp. CAG:277, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(23280..24101)
DNA (822bp) protein (274aa)
ABC-type antimicrobial peptide transport system ATPase component n=1 Tax=Clostridium sp. CAG:277 RepID=R7K178_9CLOT
ABC-type antimicrobial peptide transport system ATPase component {ECO:0000313|EMBL:CDE69656.1}; TaxID=1262790 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium; environmental samples.;" source="Clostridium sp. CAG:277.;"
ABC transporter-like protein
L3_102_000M1_scaffold_29_21
Clostridium sp. CAG:277, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(24129..25094)
DNA (966bp) protein (322aa)
Uncharacterized protein n=1 Tax=Clostridium sp. CAG:277 RepID=R7K3R7_9CLOT
Uncharacterized protein {ECO:0000313|EMBL:CDE69657.1}; TaxID=1262790 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium; environmental samples.;" source="Clostridium sp. CAG:277.;"
hypothetical protein
L3_102_000M1_scaffold_29_22
Clostridium sp. CAG:277, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(25127..25792)
DNA (666bp) protein (222aa)
Response regulator receiver domain protein n=1 Tax=Clostridium sp. CAG:277 RepID=R7K1F6_9CLOT
Response regulator receiver domain protein {ECO:0000313|EMBL:CDE69658.1}; TaxID=1262790 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium; environmental samples.;" source="Clostridium sp. CAG:277.;"
Response regulators consisting of a CheY-like receiver domain and a winged-helix DNA-binding domain
L3_102_000M1_scaffold_29_23
Roseburia sp. CAG:380, Roseburia, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(25820..26296)
DNA (477bp) protein (159aa)
C_GCAxxG_C_C family protein n=1 Tax=Roseburia sp. CAG:380 RepID=R6V731_9FIRM
C_GCAxxG_C_C family protein {ECO:0000313|EMBL:CDC92890.1}; TaxID=1262946 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Roseburia; environmental samples.;" source="Roseburia sp. CAG:380.;"
hypothetical protein
L3_102_000M1_scaffold_29_24
Roseburia sp. CAG:380, Roseburia, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(26324..28030)
DNA (1707bp) protein (569aa)
Methyl-accepting chemotaxis protein n=1 Tax=Roseburia sp. CAG:380 RepID=R6VEV7_9FIRM
Methyl-accepting chemotaxis protein {ECO:0000313|EMBL:CDC92894.1}; TaxID=1262946 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Roseburia; environmental samples.;" source="Roseburia sp. CAG:380.;"
Methyl-accepting chemotaxis protein
L3_102_000M1_scaffold_29_25
Roseburia sp. CAG:380, Roseburia, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(28042..29235)
DNA (1194bp) protein (398aa)
Nucleoside-binding protein n=1 Tax=Roseburia sp. CAG:380 RepID=R6V736_9FIRM
Nucleoside-binding protein {ECO:0000313|EMBL:CDC92895.1}; TaxID=1262946 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Roseburia; environmental samples.;" source="Roseburia sp. CAG:380.;"
nucleoside-binding protein
L3_102_000M1_scaffold_29_26
Clostridium sp. CAG:277, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(29283..30269)
DNA (987bp) protein (329aa)
RelA/SpoT domain protein n=1 Tax=Clostridium sp. CAG:277 RepID=R7K1G0_9CLOT
RelA/SpoT domain protein {ECO:0000313|EMBL:CDE69663.1}; TaxID=1262790 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium; environmental samples.;" source="Clostridium sp. CAG:277.;"
RelA/SpoT domain containing protein
L3_102_000M1_scaffold_29_27
Clostridium sp. CAG:277, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(30298..31476)
DNA (1179bp) protein (393aa)
NADH-dependent butanol dehydrogenase A n=1 Tax=Clostridium sp. CAG:277 RepID=R7K0B5_9CLOT
NADH-dependent butanol dehydrogenase A {ECO:0000313|EMBL:CDE69664.1}; TaxID=1262790 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium; environmental samples.;" source="Clostridium sp. CAG:277.;"
Uncharacterized oxidoreductases, Fe-dependent alcohol dehydrogenase family
L3_102_000M1_scaffold_29_28
Roseburia sp. CAG:380, Roseburia, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(31603..31731)
DNA (129bp) protein (43aa)
NTP pyrophosphohydrolases containing a Zn-finger probably nucleic-acid-binding n=1 Tax=Roseburia sp. CAG:380 RepID=R6V3Z6_9FIRM
NTP pyrophosphohydrolases containing a Zn-finger probably nucleic-acid-binding {ECO:0000313|EMBL:CDC92903.1}; TaxID=1262946 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Roseburia; environmental samples.;" source="Roseburia sp. CAG:380.;"
L3_102_000M1_scaffold_29_29
Roseburia sp. CAG:380, Roseburia, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

31885..32118
DNA (234bp) protein (78aa)
Uncharacterized protein n=1 Tax=Roseburia sp. CAG:380 RepID=R6VEW9_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:CDC92904.1}; TaxID=1262946 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Roseburia; environmental samples.;" source="Roseburia sp. CAG:380.;"
hypothetical protein
L3_102_000M1_scaffold_29_30
Roseburia sp. CAG:380, Roseburia, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(32723..34153)
DNA (1431bp) protein (477aa)
Uncharacterized protein n=1 Tax=Roseburia sp. CAG:380 RepID=R6VTF4_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:CDC95421.1}; TaxID=1262946 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Roseburia; environmental samples.;" source="Roseburia sp. CAG:380.;"
Displaying items 1-30 of 129 in total

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