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L3_102_000M1_scaffold_904

Search features with annotation key words

Displaying items 1-30 of 56 in total
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
L3_102_000M1_scaffold_904_1
Roseburia sp. CAG:380, Roseburia, Clostridiales, Clostridia, Firmicutes, Bacteria

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1..705
DNA (705bp) protein (235aa)
Uncharacterized protein n=1 Tax=Roseburia sp. CAG:380 RepID=R6WEU9_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:CDC92717.1}; TaxID=1262946 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Roseburia; environmental samples.;" source="Roseburia sp. CAG:380.;"
ABC-2 type transporter.
L3_102_000M1_scaffold_904_2
Roseburia sp. CAG:380, Roseburia, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

692..1852
DNA (1161bp) protein (387aa)
Uncharacterized protein n=1 Tax=Roseburia sp. CAG:380 RepID=R6V6P8_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:CDC92715.1}; TaxID=1262946 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Roseburia; environmental samples.;" source="Roseburia sp. CAG:380.;"
ABC-type multidrug transport system, permease component
L3_102_000M1_scaffold_904_3
Roseburia sp. CAG:380, Roseburia, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

2067..3989
DNA (1923bp) protein (641aa)
Basic membrane protein n=1 Tax=Roseburia sp. CAG:380 RepID=R6V3I0_9FIRM
Basic membrane protein {ECO:0000313|EMBL:CDC92713.1}; TaxID=1262946 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Roseburia; environmental samples.;" source="Roseburia sp. CAG:380.;"
basic membrane lipoprotein
L3_102_000M1_scaffold_904_4
Roseburia sp. CAG:380, Roseburia, Clostridiales, Clostridia, Firmicutes, Bacteria

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4083..4745
DNA (663bp) protein (221aa)
Predicted phosphoesterases related to the Icc protein n=1 Tax=Roseburia sp. CAG:380 RepID=R6VKG1_9FIRM
Predicted phosphoesterases related to the Icc protein {ECO:0000313|EMBL:CDC92711.1}; TaxID=1262946 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Roseburia; environmental samples.;" source="Roseburia sp. CAG:380.;"
Predicted phosphoesterases, related to the Icc protein
L3_102_000M1_scaffold_904_5
Roseburia sp. CAG:380, Roseburia, Clostridiales, Clostridia, Firmicutes, Bacteria

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4868..5497
DNA (630bp) protein (210aa)
RNA polymerase sigma factor n=1 Tax=Roseburia sp. CAG:380 RepID=R6VKF3_9FIRM
RNA polymerase sigma factor {ECO:0000256|RuleBase:RU000715}; TaxID=1262946 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Roseburia; environmental samples.;" source="Roseburia sp. CAG:380.;"
FliA/WhiG family RNA polymerase sigma factor
L3_102_000M1_scaffold_904_6
Roseburia sp. CAG:380, Roseburia, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

5519..6580
DNA (1062bp) protein (354aa)
Uncharacterized domain HDIG n=1 Tax=Roseburia sp. CAG:380 RepID=R6VEC6_9FIRM
Uncharacterized domain HDIG {ECO:0000313|EMBL:CDC92699.1}; TaxID=1262946 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Roseburia; environmental samples.;" source="Roseburia sp. CAG:380.;"
uncharacterized domain HDIG
L3_102_000M1_scaffold_904_7
Clostridium sp. CAG:75, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

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6549..8060
DNA (1512bp) protein (504aa)
23S rRNA m(5)U-1939 methyltransferase (EC:2.1.1.-)
23S rRNA (Uracil-5-)-methyltransferase RumA n=1 Tax=Clostridium sp. CAG:75 RepID=R5SEQ7_9CLOT
23S rRNA (Uracil-5-)-methyltransferase RumA {ECO:0000313|EMBL:CCZ51648.1}; TaxID=1262836 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium; environmental samples.;" source="Clostridium sp. CAG:75.;"
L3_102_000M1_scaffold_904_8
Roseburia sp. CAG:380, Roseburia, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(8464..9447)
DNA (984bp) protein (328aa)
Putative sugar ABC transporter periplasmic sugar-binding protein n=1 Tax=Roseburia sp. CAG:380 RepID=R6WER9_9FIRM
Putative sugar ABC transporter periplasmic sugar-binding protein {ECO:0000313|EMBL:CDC92687.1}; TaxID=1262946 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Roseburia; environmental samples.;" source="Roseburia sp. CAG:380.;"
ABC-type sugar transport system, periplasmic component
L3_102_000M1_scaffold_904_9
Roseburia sp. CAG:380, Roseburia, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(9479..11506)
DNA (2028bp) protein (676aa)
Putative methyl-accepting chemotaxis protein signaling domain protein n=1 Tax=Roseburia sp. CAG:380 RepID=R6V6M9_9FIRM
Putative methyl-accepting chemotaxis protein signaling domain protein {ECO:0000313|EMBL:CDC92685.1}; TaxID=1262946 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Roseburia; environmental samples.;" source="Roseburia sp. CAG:380.;"
methyl-accepting chemotaxis protein
L3_102_000M1_scaffold_904_10
Roseburia sp. CAG:380, Roseburia, Clostridiales, Clostridia, Firmicutes, Bacteria

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11657..11965
DNA (309bp) protein (103aa)
Glycosyl transferase group 2 family protein putative n=1 Tax=Roseburia sp. CAG:380 RepID=R6V3F4_9FIRM
Glycosyl transferase group 2 family protein putative {ECO:0000313|EMBL:CDC92683.1}; TaxID=1262946 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Roseburia; environmental samples.;" source="Roseburia sp. CAG:380.;"
Glycosyltransferase Family 2-like b-glycosyltransferase
L3_102_000M1_scaffold_904_11
Roseburia sp. CAG:380, Roseburia, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

11972..12235
DNA (264bp) protein (88aa)
Predicted glycosyltransferase n=1 Tax=Roseburia sp. CAG:380 RepID=R6V6M5_9FIRM
Predicted glycosyltransferase {ECO:0000313|EMBL:CDC92680.1}; TaxID=1262946 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Roseburia; environmental samples.;" source="Roseburia sp. CAG:380.;"
L3_102_000M1_scaffold_904_12
Roseburia sp. CAG:380, Roseburia, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

12232..12618
DNA (387bp) protein (129aa)
Uncharacterized protein n=1 Tax=Roseburia sp. CAG:380 RepID=R6VEB1_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:CDC92679.1}; TaxID=1262946 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Roseburia; environmental samples.;" source="Roseburia sp. CAG:380.;"
hypothetical protein
L3_102_000M1_scaffold_904_13
Roseburia sp. CAG:380, Roseburia, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

12825..15797
DNA (2973bp) protein (991aa)
cellulase (EC:3.2.1.4)
Cellulase n=1 Tax=Roseburia sp. CAG:380 RepID=R6VJ27_9FIRM
Cellulase {ECO:0000313|EMBL:CDC94279.1}; TaxID=1262946 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Roseburia; environmental samples.;" source="Roseburia sp. CAG:380.;"
L3_102_000M1_scaffold_904_14
Roseburia sp. CAG:380, Roseburia, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

15884..16189
DNA (306bp) protein (102aa)
DNA-damage-inducible protein J n=1 Tax=Roseburia sp. CAG:380 RepID=R6WJB4_9FIRM
DNA-damage-inducible protein J {ECO:0000313|EMBL:CDC94277.1}; TaxID=1262946 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Roseburia; environmental samples.;" source="Roseburia sp. CAG:380.;"
DNA-damage-inducible protein J
L3_102_000M1_scaffold_904_15
Roseburia sp. CAG:380, Roseburia, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(16348..18999)
DNA (2652bp) protein (884aa)
Uncharacterized protein n=1 Tax=Roseburia sp. CAG:380 RepID=R6WJA9_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:CDC94272.1}; TaxID=1262946 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Roseburia; environmental samples.;" source="Roseburia sp. CAG:380.;"
ABC-type transport system, involved in lipoprotein release, permease component
L3_102_000M1_scaffold_904_16

Not on your lists

comp(19011..19682)
DNA (672bp) protein (224aa)
ABC-type antimicrobial peptide transport system, ATPase component n=4 Tax=root RepID=D4LWH3_9FIRM
ABC-type antimicrobial peptide transport system, ATPase component
ABC-type antimicrobial peptide transport system, ATPase component {ECO:0000313|EMBL:EKC45252.1}; TaxID=408170 species="unclassified sequences; metagenomes; organismal metagenomes.;" source="human gut metagenome.;"
L3_102_000M1_scaffold_904_17

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comp(19799..20698)
DNA (900bp) protein (300aa)
Two-component sensor histidine kinase n=2 Tax=human gut metagenome RepID=K1UAY7_9ZZZZ
Two-component sensor histidine kinase {ECO:0000313|EMBL:EKC79348.1}; TaxID=408170 species="unclassified sequences; metagenomes; organismal metagenomes.;" source="human gut metagenome.;"
Signal transduction histidine kinase
L3_102_000M1_scaffold_904_18
Roseburia sp. CAG:380, Roseburia, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(20699..21373)
DNA (675bp) protein (225aa)
DNA-binding response regulator RegX3 n=1 Tax=Roseburia sp. CAG:380 RepID=R6WJ90_9FIRM
DNA-binding response regulator RegX3 {ECO:0000313|EMBL:CDC94252.1}; TaxID=1262946 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Roseburia; environmental samples.;" source="Roseburia sp. CAG:380.;"
Response regulators consisting of a CheY-like receiver domain and a winged-helix DNA-binding domain
L3_102_000M1_scaffold_904_19
Roseburia sp. CAG:380, Roseburia, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

21867..23480
DNA (1614bp) protein (538aa)
Uncharacterized protein n=1 Tax=Roseburia sp. CAG:380 RepID=R6VAR6_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:CDC94250.1}; TaxID=1262946 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Roseburia; environmental samples.;" source="Roseburia sp. CAG:380.;"
hypothetical protein
L3_102_000M1_scaffold_904_20
Roseburia sp. CAG:380, Roseburia, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

23481..24062
DNA (582bp) protein (194aa)
Uncharacterized protein n=1 Tax=Roseburia sp. CAG:380 RepID=R6V7M9_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:CDC94248.1}; TaxID=1262946 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Roseburia; environmental samples.;" source="Roseburia sp. CAG:380.;"
hypothetical protein
L3_102_000M1_scaffold_904_21
Roseburia sp. CAG:380, Roseburia, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

24046..25413
DNA (1368bp) protein (456aa)
Uncharacterized protein n=1 Tax=Roseburia sp. CAG:380 RepID=R6VQ03_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:CDC94246.1}; TaxID=1262946 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Roseburia; environmental samples.;" source="Roseburia sp. CAG:380.;"
hypothetical protein
L3_102_000M1_scaffold_904_22
Roseburia sp. CAG:380, Roseburia, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

25417..26547
DNA (1131bp) protein (377aa)
Uncharacterized protein n=1 Tax=Roseburia sp. CAG:380 RepID=R6VAR1_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:CDC94245.1}; TaxID=1262946 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Roseburia; environmental samples.;" source="Roseburia sp. CAG:380.;"
hypothetical protein
L3_102_000M1_scaffold_904_23
Roseburia sp. CAG:380, Roseburia, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

26513..26974
DNA (462bp) protein (154aa)
6-pyruvoyl tetrahydrobiopterin synthase n=1 Tax=Roseburia sp. CAG:380 RepID=R6V7M4_9FIRM
6-pyruvoyl tetrahydrobiopterin synthase {ECO:0000313|EMBL:CDC94243.1}; TaxID=1262946 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Roseburia; environmental samples.;" source="Roseburia sp. CAG:380.;"
6-pyruvoyl tetrahydrobiopterin synthase
L3_102_000M1_scaffold_904_24
Roseburia sp. CAG:380, Roseburia, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

26986..29448
DNA (2463bp) protein (821aa)
Uncharacterized protein n=1 Tax=Roseburia sp. CAG:380 RepID=R6VPZ8_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:CDC94241.1}; TaxID=1262946 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Roseburia; environmental samples.;" source="Roseburia sp. CAG:380.;"
hypothetical protein
L3_102_000M1_scaffold_904_25
Roseburia sp. CAG:380, Roseburia, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

29488..30822
DNA (1335bp) protein (445aa)
Putative efflux protein MATE family n=1 Tax=Roseburia sp. CAG:380 RepID=R6VIZ5_9FIRM
Putative efflux protein MATE family {ECO:0000313|EMBL:CDC94239.1}; TaxID=1262946 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Roseburia; environmental samples.;" source="Roseburia sp. CAG:380.;"
putative efflux protein, MATE family
L3_102_000M1_scaffold_904_26
Roseburia sp. CAG:380, Roseburia, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

30976..33174
DNA (2199bp) protein (733aa)
Uncharacterized protein n=1 Tax=Roseburia sp. CAG:380 RepID=R6WJ74_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:CDC94237.1}; TaxID=1262946 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Roseburia; environmental samples.;" source="Roseburia sp. CAG:380.;"
hypothetical protein
L3_102_000M1_scaffold_904_27
Roseburia sp. CAG:380, Roseburia, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

33328..33840
DNA (513bp) protein (171aa)
Carbonic anhydrases/acetyltransferases isoleucine patch superfamily n=1 Tax=Roseburia sp. CAG:380 RepID=R6VAQ0_9FIRM
Carbonic anhydrases/acetyltransferases isoleucine patch superfamily {ECO:0000313|EMBL:CDC94235.1}; TaxID=1262946 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Roseburia; environmental samples.;" source="Roseburia sp. CAG:380.;"
Carbonic anhydrases/acetyltransferases, isoleucine patch superfamily
L3_102_000M1_scaffold_904_28
Roseburia sp. CAG:380, Roseburia, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

33837..35195
DNA (1359bp) protein (453aa)
Transporter n=1 Tax=Roseburia sp. CAG:380 RepID=R6V7L4_9FIRM
Transporter {ECO:0000256|RuleBase:RU003732}; TaxID=1262946 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Roseburia; environmental samples.;" source="Roseburia sp. CAG:380.;"
Na+-dependent transporters of the SNF family
L3_102_000M1_scaffold_904_29
Roseburia sp. CAG:380, Roseburia, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

35237..36592
DNA (1356bp) protein (452aa)
Transporter n=1 Tax=Roseburia sp. CAG:380 RepID=R6VPY7_9FIRM
Transporter {ECO:0000256|RuleBase:RU003732}; TaxID=1262946 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Roseburia; environmental samples.;" source="Roseburia sp. CAG:380.;"
Na+-dependent transporters of the SNF family
L3_102_000M1_scaffold_904_30
Clostridium sp. CAG:277, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(36752..38323)
DNA (1572bp) protein (524aa)
Hydroxylamine reductase {ECO:0000256|HAMAP-Rule:MF_00069, ECO:0000256|SAAS:SAAS00038686}; EC=1.7.99.1 {ECO:0000256|HAMAP-Rule:MF_00069, ECO:0000256|SAAS:SAAS00150119};; Hybrid-cluster protein {ECO:0000256|HAMAP-Rule:MF_00069}; Prismane protein {ECO:0000256|HAMAP-Rule:MF_00069}; TaxID=1262790 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium; environmental samples.;" source="Clostridium sp. CAG:277.;"
hcp; Hydroxylamine reductase (EC:1.7.-.-)
Hydroxylamine reductase n=1 Tax=Clostridium sp. CAG:277 RepID=R7JZR6_9CLOT
Displaying items 1-30 of 56 in total

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