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L3_102_000M1_scaffold_948

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Displaying 30 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
L3_102_000M1_scaffold_948_1
Roseburia sp. CAG:380, Roseburia, Clostridiales, Clostridia, Firmicutes, Bacteria

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comp(1..528)
DNA (528bp) protein (176aa)
Uncharacterized protein n=1 Tax=Roseburia sp. CAG:380 RepID=R6WEU9_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:CDC92717.1}; TaxID=1262946 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Roseburia; environmental samples.;" source="Roseburia sp. CAG:380.;"
ABC-2 type transporter
L3_102_000M1_scaffold_948_2
Roseburia sp. CAG:380, Roseburia, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(540..1472)
DNA (933bp) protein (311aa)
ABC transporter related protein n=1 Tax=Roseburia sp. CAG:380 RepID=R6VED9_9FIRM
ABC transporter related protein {ECO:0000313|EMBL:CDC92719.1}; TaxID=1262946 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Roseburia; environmental samples.;" source="Roseburia sp. CAG:380.;"
ABC transporter-like protein
L3_102_000M1_scaffold_948_3
Roseburia sp. CAG:380, Roseburia, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

1709..2818
DNA (1110bp) protein (370aa)
Putative histidine kinase-related ATPase n=1 Tax=Roseburia sp. CAG:380 RepID=R6VKG9_9FIRM
Putative histidine kinase-related ATPase {ECO:0000313|EMBL:CDC92721.1}; TaxID=1262946 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Roseburia; environmental samples.;" source="Roseburia sp. CAG:380.;"
Signal transduction histidine kinase
L3_102_000M1_scaffold_948_4
Roseburia sp. CAG:380, Roseburia, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

2940..3560
DNA (621bp) protein (207aa)
Response regulator receiver domain protein n=1 Tax=Roseburia sp. CAG:380 RepID=R6V3I7_9FIRM
Response regulator receiver domain protein {ECO:0000313|EMBL:CDC92723.1}; TaxID=1262946 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Roseburia; environmental samples.;" source="Roseburia sp. CAG:380.;"
Response regulator containing a CheY-like receiver domain and an HTH DNA-binding domain
L3_102_000M1_scaffold_948_5
Roseburia sp. CAG:380, Roseburia, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(3684..4454)
DNA (771bp) protein (257aa)
Phosphonoacetaldehyde hydrolase {ECO:0000256|HAMAP-Rule:MF_01375}; Short=Phosphonatase {ECO:0000256|HAMAP-Rule:MF_01375};; EC=3.11.1.1 {ECO:0000256|HAMAP-Rule:MF_01375};; Phosphonoacetaldehyde phosphonohydrolase {ECO:0000256|HAMAP-Rule:MF_01375}; TaxID=1262946 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Roseburia; environmental samples.;" source="Roseburia sp. CAG:380.;"
Phosphonoacetaldehyde hydrolase n=1 Tax=Roseburia sp. CAG:380 RepID=R6V6Q4_9FIRM
phnX; phosphonoacetaldehyde hydrolase
L3_102_000M1_scaffold_948_6
Roseburia sp. CAG:380, Roseburia, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(4471..5571)
DNA (1101bp) protein (367aa)
2-aminoethylphosphonate--pyruvate transaminase {ECO:0000256|HAMAP-Rule:MF_01376, ECO:0000256|SAAS:SAAS00009569}; EC=2.6.1.37 {ECO:0000256|HAMAP-Rule:MF_01376, ECO:0000256|SAAS:SAAS00009569};; 2-aminoethylphosphonate aminotransferase {ECO:0000256|HAMAP-Rule:MF_01376}; AEP transaminase {ECO:0000256|HAMAP-Rule:MF_01376}; TaxID=1262946 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Roseburia; environmental samples.;" source="Roseburia sp. CAG:380.;"
2-aminoethylphosphonate--pyruvate transaminase n=1 Tax=Roseburia sp. CAG:380 RepID=R6V3J2_9FIRM
2-aminoethylphosphonate--pyruvate transaminase
L3_102_000M1_scaffold_948_7
Roseburia sp. CAG:380, Roseburia, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(5637..6620)
DNA (984bp) protein (328aa)
Uncharacterized protein n=1 Tax=Roseburia sp. CAG:380 RepID=R6V6Q8_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:CDC92730.1}; TaxID=1262946 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Roseburia; environmental samples.;" source="Roseburia sp. CAG:380.;"
ABC-type Fe3+ transport system, periplasmic component
L3_102_000M1_scaffold_948_8
Clostridium sp. CAG:75, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(6638..8269)
DNA (1632bp) protein (544aa)
Inner membrane transporter n=1 Tax=Clostridium sp. CAG:75 RepID=R5SJK9_9CLOT
Inner membrane transporter {ECO:0000313|EMBL:CCZ53308.1}; TaxID=1262836 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium; environmental samples.;" source="Clostridium sp. CAG:75.;"
ABC-type Fe3+ transport system, permease component
L3_102_000M1_scaffold_948_9
Roseburia sp. CAG:380, Roseburia, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(8308..9078)
DNA (771bp) protein (257aa)
Spermidine/putrescine import ATP-binding protein PotA n=1 Tax=Roseburia sp. CAG:380 RepID=R6WEX4_9FIRM
Spermidine/putrescine import ATP-binding protein PotA {ECO:0000313|EMBL:CDC92742.1}; TaxID=1262946 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Roseburia; environmental samples.;" source="Roseburia sp. CAG:380.;"
hypothetical protein
L3_102_000M1_scaffold_948_10
Roseburia sp. CAG:380, Roseburia, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

9569..10483
DNA (915bp) protein (305aa)
Sodium transport system ATP-binding protein n=1 Tax=Roseburia sp. CAG:380 RepID=R6VXN6_9FIRM
Sodium transport system ATP-binding protein {ECO:0000313|EMBL:CDC96761.1}; TaxID=1262946 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Roseburia; environmental samples.;" source="Roseburia sp. CAG:380.;"
sodium transport system ATP-binding protein
L3_102_000M1_scaffold_948_11
Roseburia sp. CAG:380, Roseburia, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

10591..11874
DNA (1284bp) protein (428aa)
Sodium transport system permease protein n=1 Tax=Roseburia sp. CAG:380 RepID=R6VEL4_9FIRM
Sodium transport system permease protein {ECO:0000313|EMBL:CDC96763.1}; TaxID=1262946 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Roseburia; environmental samples.;" source="Roseburia sp. CAG:380.;"
sodium transport system permease
L3_102_000M1_scaffold_948_12
Roseburia sp. CAG:380, Roseburia, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(11975..13882)
DNA (1908bp) protein (636aa)
Diguanylate cyclase n=1 Tax=Roseburia sp. CAG:380 RepID=R6VR09_9FIRM
Diguanylate cyclase {ECO:0000313|EMBL:CDC96764.1}; TaxID=1262946 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Roseburia; environmental samples.;" source="Roseburia sp. CAG:380.;"
diguanylate cyclase with N-terminal HTH-type transcriptional regulator domain
L3_102_000M1_scaffold_948_13
Roseburia sp. CAG:380, Roseburia, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(14032..17547)
DNA (3516bp) protein (1172aa)
Metallophosphoesterase n=1 Tax=Roseburia sp. CAG:380 RepID=R6VIH3_9FIRM
Metallophosphoesterase {ECO:0000313|EMBL:CDC96765.1}; TaxID=1262946 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Roseburia; environmental samples.;" source="Roseburia sp. CAG:380.;"
metallophosphoesterase
L3_102_000M1_scaffold_948_14
unknown

Not on your lists

comp(17501..17719)
DNA (219bp) protein (73aa)

This feature has no annotations

L3_102_000M1_scaffold_948_15
Roseburia sp. CAG:380, Roseburia, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(17823..19469)
DNA (1647bp) protein (549aa)
inorganic diphosphatase (EC:3.6.1.1)
Uncharacterized protein n=1 Tax=Roseburia sp. CAG:380 RepID=R6VXQ0_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:CDC96776.1}; TaxID=1262946 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Roseburia; environmental samples.;" source="Roseburia sp. CAG:380.;"
L3_102_000M1_scaffold_948_16
Roseburia sp. CAG:380, Roseburia, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(19471..21606)
DNA (2136bp) protein (712aa)
Uncharacterized protein n=1 Tax=Roseburia sp. CAG:380 RepID=R6VXQ7_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:CDC96781.1}; TaxID=1262946 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Roseburia; environmental samples.;" source="Roseburia sp. CAG:380.;"
hypothetical protein
L3_102_000M1_scaffold_948_17
Roseburia sp. CAG:380, Roseburia, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(21623..22444)
DNA (822bp) protein (274aa)
Predicted amidohydrolase n=1 Tax=Roseburia sp. CAG:380 RepID=R6WRM9_9FIRM
Predicted amidohydrolase {ECO:0000313|EMBL:CDC96782.1}; TaxID=1262946 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Roseburia; environmental samples.;" source="Roseburia sp. CAG:380.;"
Nitrilase/cyanide hydratase and apolipoprotein N-acyltransferase
L3_102_000M1_scaffold_948_18
Roseburia sp. CAG:380, Roseburia, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

22616..23254
DNA (639bp) protein (213aa)
Uncharacterized protein n=1 Tax=Roseburia sp. CAG:380 RepID=R6VIJ3_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:CDC96785.1}; TaxID=1262946 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Roseburia; environmental samples.;" source="Roseburia sp. CAG:380.;"
hypothetical protein
L3_102_000M1_scaffold_948_19
Roseburia sp. CAG:380, Roseburia, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

23273..24703
DNA (1431bp) protein (477aa)
NOL1/NOP2/sun family protein n=1 Tax=Roseburia sp. CAG:380 RepID=R6WRN5_9FIRM
NOL1/NOP2/sun family protein {ECO:0000313|EMBL:CDC96787.1}; TaxID=1262946 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Roseburia; environmental samples.;" source="Roseburia sp. CAG:380.;"
RNA methylase
L3_102_000M1_scaffold_948_20
Roseburia sp. CAG:380, Roseburia, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(24673..25314)
DNA (642bp) protein (214aa)
Phosphoglycolate phosphatase n=1 Tax=Roseburia sp. CAG:380 RepID=R6VR27_9FIRM
Phosphoglycolate phosphatase {ECO:0000313|EMBL:CDC96789.1}; TaxID=1262946 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Roseburia; environmental samples.;" source="Roseburia sp. CAG:380.;"
Phosphoglycolate phosphatase
L3_102_000M1_scaffold_948_21
Roseburia sp. CAG:380, Roseburia, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(25265..25399)
DNA (135bp) protein (45aa)
Uncharacterized protein n=1 Tax=Roseburia sp. CAG:380 RepID=R6VR30_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:CDC96794.1}; TaxID=1262946 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Roseburia; environmental samples.;" source="Roseburia sp. CAG:380.;"
L3_102_000M1_scaffold_948_22
Roseburia sp. CAG:380, Roseburia, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(25396..26154)
DNA (759bp) protein (253aa)
Lytic transglycosylase n=1 Tax=Roseburia sp. CAG:380 RepID=R6VXS5_9FIRM
Lytic transglycosylase {ECO:0000313|EMBL:CDC96796.1}; TaxID=1262946 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Roseburia; environmental samples.;" source="Roseburia sp. CAG:380.;"
hypothetical protein
L3_102_000M1_scaffold_948_23
Roseburia sp. CAG:380, Roseburia, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(26156..26491)
DNA (336bp) protein (112aa)
Uncharacterized protein n=1 Tax=Roseburia sp. CAG:380 RepID=R6VEP4_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:CDC96798.1}; TaxID=1262946 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Roseburia; environmental samples.;" source="Roseburia sp. CAG:380.;"
L3_102_000M1_scaffold_948_24
Roseburia sp. CAG:380, Roseburia, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(26511..27686)
DNA (1176bp) protein (392aa)
Beta-lactamase class C and other penicillin binding proteins n=1 Tax=Roseburia sp. CAG:380 RepID=R6VXT2_9FIRM
Beta-lactamase class C and other penicillin binding proteins {ECO:0000313|EMBL:CDC96801.1}; TaxID=1262946 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Roseburia; environmental samples.;" source="Roseburia sp. CAG:380.;"
Beta-lactamase class C and other penicillin binding proteins
L3_102_000M1_scaffold_948_25
Roseburia sp. CAG:380, Roseburia, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

27902..28324
DNA (423bp) protein (141aa)
Uncharacterized protein n=1 Tax=Roseburia sp. CAG:380 RepID=R6VR38_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:CDC96804.1}; TaxID=1262946 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Roseburia; environmental samples.;" source="Roseburia sp. CAG:380.;"
Predicted membrane protein
L3_102_000M1_scaffold_948_26
Roseburia sp. CAG:380, Roseburia, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(28351..29241)
DNA (891bp) protein (297aa)
Uncharacterized protein n=1 Tax=Roseburia sp. CAG:380 RepID=R6VIL2_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:CDC96805.1}; TaxID=1262946 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Roseburia; environmental samples.;" source="Roseburia sp. CAG:380.;"
hypothetical protein
L3_102_000M1_scaffold_948_27
Roseburia sp. CAG:380, Roseburia, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(29379..30332)
DNA (954bp) protein (318aa)
Uncharacterized protein n=1 Tax=Roseburia sp. CAG:380 RepID=R6VFB1_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:CDC95805.1}; TaxID=1262946 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Roseburia; environmental samples.;" source="Roseburia sp. CAG:380.;"
surface antigen
L3_102_000M1_scaffold_948_28
Roseburia sp. CAG:380, Roseburia, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists


comp(30611..32017)
DNA (1407bp) protein (469aa)
Glycine--tRNA ligase {ECO:0000256|HAMAP-Rule:MF_00253, ECO:0000256|SAAS:SAAS00006545}; EC=6.1.1.14 {ECO:0000256|HAMAP-Rule:MF_00253, ECO:0000256|SAAS:SAAS00015978};; Glycyl-tRNA synthetase {ECO:0000256|HAMAP-Rule:MF_00253}; TaxID=1262946 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Roseburia; environmental samples.;" source="Roseburia sp. CAG:380.;"
glycyl-tRNA synthetase, dimeric type (EC:6.1.1.14)
Glycine--tRNA ligase n=1 Tax=Roseburia sp. CAG:380 RepID=R6VUL0_9FIRM
L3_102_000M1_scaffold_948_29
Roseburia sp. CAG:380, Roseburia, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(32257..33405)
DNA (1149bp) protein (383aa)
lactaldehyde reductase (EC:1.1.1.77)
Uncharacterized protein n=1 Tax=Roseburia sp. CAG:380 RepID=R6WNU6_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:CDC95807.1}; TaxID=1262946 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Roseburia; environmental samples.;" source="Roseburia sp. CAG:380.;"
L3_102_000M1_scaffold_948_30
Roseburia sp. CAG:380, Roseburia, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(33660..33863)
DNA (204bp) protein (68aa)
Uncharacterized protein n=1 Tax=Roseburia sp. CAG:380 RepID=R6VFB4_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:CDC95810.1}; TaxID=1262946 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Roseburia; environmental samples.;" source="Roseburia sp. CAG:380.;"
Displaying 30 items

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