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L3_102_000M1_scaffold_1384

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Displaying 21 items
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*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
L3_102_000M1_scaffold_1384_1
Firmicutes bacterium CAG:424, Firmicutes, Bacteria

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comp(50..412)
DNA (363bp) protein (121aa)
membrane protein n=1 Tax=Butyrivibrio sp. XPD2006 RepID=UPI0003B5D453
Uncharacterized protein {ECO:0000313|EMBL:CDC42848.1}; TaxID=1263022 species="Bacteria; Firmicutes; environmental samples.;" source="Firmicutes bacterium CAG:424.;"
Predicted membrane protein
L3_102_000M1_scaffold_1384_2
Eubacterium sp. CAG:161, Eubacterium, Clostridiales, Clostridia, Firmicutes, Bacteria

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comp(1063..1830)
DNA (768bp) protein (256aa)
Oxidoreductase short chain dehydrogenase/reductase family protein n=1 Tax=Eubacterium sp. CAG:161 RepID=R5KUA8_9FIRM
Oxidoreductase short chain dehydrogenase/reductase family protein {ECO:0000313|EMBL:CCY70413.1}; TaxID=1262881 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Eubacteriaceae; Eubacterium; environmental samples.;" source="Eubacterium sp. CAG:161.;"
Short-chain dehydrogenases of various substrate specificities
L3_102_000M1_scaffold_1384_3
Eubacterium sp. CAG:192, Eubacterium, Clostridiales, Clostridia, Firmicutes, Bacteria

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comp(1852..2592)
DNA (741bp) protein (247aa)
Signal peptidase I {ECO:0000256|RuleBase:RU362042}; EC=3.4.21.89 {ECO:0000256|RuleBase:RU362042};; TaxID=1262883 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Eubacteriaceae; Eubacterium; environmental samples.;" source="Eubacterium sp. CAG:192.;"
Signal peptidase I n=1 Tax=Eubacterium sp. CAG:192 RepID=R6FMM0_9FIRM
signal peptidase I
L3_102_000M1_scaffold_1384_4
Eubacterium ventriosum, Eubacterium, Clostridiales, Clostridia, Firmicutes, Bacteria

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comp(2720..3340)
DNA (621bp) protein (207aa)
Flavin reductase {ECO:0000313|EMBL:EDM50329.1}; EC=1.7.-.- {ECO:0000313|EMBL:EDM50329.1};; TaxID=411463 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Eubacteriaceae; Eubacterium.;" source="Eubacterium ventriosum ATCC 27560.;"
Flavin reductase n=2 Tax=root RepID=A5Z985_9FIRM
Multimeric flavodoxin WrbA
L3_102_000M1_scaffold_1384_5
Eubacterium ventriosum, Eubacterium, Clostridiales, Clostridia, Firmicutes, Bacteria

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comp(3406..5001)
DNA (1596bp) protein (532aa)
Peptide chain release factor 3 n=2 Tax=root RepID=A5Z9F8_9FIRM
Peptide chain release factor 3 {ECO:0000256|HAMAP-Rule:MF_00072, ECO:0000256|SAAS:SAAS00089051}; Short=RF-3 {ECO:0000256|HAMAP-Rule:MF_00072};; TaxID=411463 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Eubacteriaceae; Eubacterium.;" source="Eubacterium ventriosum ATCC 27560.;"
bacterial peptide chain release factor 3 (bRF-3)
L3_102_000M1_scaffold_1384_6
Eubacterium sp. CAG:192, Eubacterium, Clostridiales, Clostridia, Firmicutes, Bacteria

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comp(5227..6717)
DNA (1491bp) protein (497aa)
glutamate synthase (NADH) small subunit (EC:1.4.1.13 1.4.1.14)
Pyridine nucleotide-disulfide oxidoreductase n=1 Tax=Eubacterium sp. CAG:192 RepID=R6FW71_9FIRM
Pyridine nucleotide-disulfide oxidoreductase {ECO:0000313|EMBL:CDB13281.1}; TaxID=1262883 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Eubacteriaceae; Eubacterium; environmental samples.;" source="Eubacterium sp. CAG:192.;"
L3_102_000M1_scaffold_1384_7
Eubacterium sp. CAG:192, Eubacterium, Clostridiales, Clostridia, Firmicutes, Bacteria

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comp(6730..11277)
DNA (4548bp) protein (1516aa)
Glutamate synthase domain 2 (EC:1.4.1.13 1.4.1.14)
Class II glutamine amidotransferase n=1 Tax=Eubacterium sp. CAG:192 RepID=R6GGA4_9FIRM
Class II glutamine amidotransferase {ECO:0000313|EMBL:CDB13282.1}; TaxID=1262883 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Eubacteriaceae; Eubacterium; environmental samples.;" source="Eubacterium sp. CAG:192.;"
L3_102_000M1_scaffold_1384_8
Eubacterium sp. CAG:192, Eubacterium, Clostridiales, Clostridia, Firmicutes, Bacteria

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comp(11439..12683)
DNA (1245bp) protein (415aa)
RNA polymerase sigma factor SigA n=1 Tax=Eubacterium sp. CAG:192 RepID=R6FJ60_9FIRM
RNA polymerase sigma factor SigA {ECO:0000256|HAMAP-Rule:MF_00963}; TaxID=1262883 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Eubacteriaceae; Eubacterium; environmental samples.;" source="Eubacterium sp. CAG:192.;"
RpoD subfamily RNA polymerase sigma-70 subunit
L3_102_000M1_scaffold_1384_9
Eubacterium sp. CAG:192, Eubacterium, Clostridiales, Clostridia, Firmicutes, Bacteria

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comp(12838..13737)
DNA (900bp) protein (300aa)
Cation diffusion facilitator family transporter n=1 Tax=Eubacterium sp. CAG:192 RepID=R6FV34_9FIRM
Cation diffusion facilitator family transporter {ECO:0000313|EMBL:CDB13284.1}; TaxID=1262883 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Eubacteriaceae; Eubacterium; environmental samples.;" source="Eubacterium sp. CAG:192.;"
cation diffusion facilitator family transporter
L3_102_000M1_scaffold_1384_10
Eubacterium sp. CAG:161, Eubacterium, Clostridiales, Clostridia, Firmicutes, Bacteria

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comp(13754..14146)
DNA (393bp) protein (131aa)
Uncharacterized protein n=1 Tax=Eubacterium sp. CAG:161 RepID=R5KNI4_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:CCY68385.1}; TaxID=1262881 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Eubacteriaceae; Eubacterium; environmental samples.;" source="Eubacterium sp. CAG:161.;"
L3_102_000M1_scaffold_1384_11
Eubacterium ventriosum, Eubacterium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(14146..14955)
DNA (810bp) protein (270aa)
HAD hydrolase, family IIB n=1 Tax=Eubacterium ventriosum ATCC 27560 RepID=A5Z978_9FIRM
HAD hydrolase, family IIB {ECO:0000313|EMBL:EDM50322.1}; TaxID=411463 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Eubacteriaceae; Eubacterium.;" source="Eubacterium ventriosum ATCC 27560.;"
cof family hydrolase
L3_102_000M1_scaffold_1384_12
Eubacterium sp. CAG:156, Eubacterium, Clostridiales, Clostridia, Firmicutes, Bacteria

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comp(15094..19059)
DNA (3966bp) protein (1322aa)
Glycosyl hydrolase family 81 n=1 Tax=Eubacterium sp. CAG:156 RepID=R5YP03_9FIRM
Glycosyl hydrolase family 81 {ECO:0000313|EMBL:CDA28530.1}; TaxID=1262880 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Eubacteriaceae; Eubacterium; environmental samples.;" source="Eubacterium sp. CAG:156.;"
putative glycosyl hydrolase
L3_102_000M1_scaffold_1384_13
Lachnospiraceae bacterium TWA4, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(19100..20887)
DNA (1788bp) protein (596aa)
TWA4_scaffold00001, whole genome shotgun sequence {ECO:0000313|EMBL:KIR03243.1}; EC=3.4.11.9 {ECO:0000313|EMBL:KIR03243.1};; TaxID=1392836 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae.;" source="Lachnospiraceae bacterium TWA4.;"
Xaa-Pro aminopeptidase (EC:3.4.11.9)
Peptidase M24 family n=1 Tax=Butyrivibrio crossotus CAG:259 RepID=R5LHB5_9FIRM
L3_102_000M1_scaffold_1384_14
unknown

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comp(20972..21421)
DNA (450bp) protein (150aa)

This feature has no annotations

L3_102_000M1_scaffold_1384_15
Eubacterium ventriosum, Eubacterium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(21684..23207)
DNA (1524bp) protein (508aa)
UPF0371 protein EUBVEN_02265 n=2 Tax=root RepID=A5Z972_9FIRM
UPF0371 protein EUBVEN_02265 {ECO:0000256|HAMAP-Rule:MF_01567}; TaxID=411463 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Eubacteriaceae; Eubacterium.;" source="Eubacterium ventriosum ATCC 27560.;"
hypothetical protein
L3_102_000M1_scaffold_1384_16
Eubacterium sp. CAG:161, Eubacterium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(23265..23687)
DNA (423bp) protein (141aa)
Flavodoxin n=1 Tax=Eubacterium sp. CAG:161 RepID=R5KZQ7_9FIRM
Flavodoxin {ECO:0000313|EMBL:CCY70559.1}; TaxID=1262881 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Eubacteriaceae; Eubacterium; environmental samples.;" source="Eubacterium sp. CAG:161.;"
flavodoxin, short chain
L3_102_000M1_scaffold_1384_17
Eubacterium sp. CAG:161, Eubacterium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(23706..24269)
DNA (564bp) protein (188aa)
Uncharacterized protein n=1 Tax=Eubacterium sp. CAG:161 RepID=R5KUP1_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:CCY70560.1}; TaxID=1262881 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Eubacteriaceae; Eubacterium; environmental samples.;" source="Eubacterium sp. CAG:161.;"
hypothetical protein
L3_102_000M1_scaffold_1384_18
Eubacterium sp. CAG:156, Eubacterium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(24462..24734)
DNA (273bp) protein (91aa)
Acylphosphatases (EC:3.6.1.7)
Acylphosphatase n=1 Tax=Eubacterium sp. CAG:156 RepID=R5YKW7_9FIRM
Acylphosphatase {ECO:0000313|EMBL:CDA28108.1}; TaxID=1262880 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Eubacteriaceae; Eubacterium; environmental samples.;" source="Eubacterium sp. CAG:156.;"
L3_102_000M1_scaffold_1384_19
Eubacterium ventriosum, Eubacterium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(24803..25063)
DNA (261bp) protein (87aa)
Tat pathway signal sequence domain protein n=1 Tax=Eubacterium ventriosum ATCC 27560 RepID=A5Z5V9_9FIRM
Tat pathway signal sequence domain protein {ECO:0000313|EMBL:EDM51526.1}; TaxID=411463 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Eubacteriaceae; Eubacterium.;" source="Eubacterium ventriosum ATCC 27560.;"
L3_102_000M1_scaffold_1384_20
[Clostridium] spiroforme, Erysipelatoclostridium, Erysipelotrichales, Erysipelotrichia, Firmicutes, Bacteria

Not on your lists

25161..25625
DNA (465bp) protein (155aa)
TspO/MBR family protein n=1 Tax=Clostridium spiroforme DSM 1552 RepID=B1C1F0_9FIRM
TspO/MBR family protein {ECO:0000313|EMBL:EDS75205.1}; TaxID=428126 species="Bacteria; Firmicutes; Erysipelotrichia; Erysipelotrichales; Erysipelotrichaceae; Erysipelatoclostridium.;" source="[Clostridium] spiroforme DSM 1552.;"
Tryptophan-rich sensory protein (mitochondrial benzodiazepine receptor homolog)
L3_102_000M1_scaffold_1384_21
Eubacterium ventriosum, Eubacterium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(25904..26140)
DNA (237bp) protein (79aa)
Putative phage prohead protease, HK97 family n=2 Tax=root RepID=A5Z345_9FIRM
Putative phage prohead protease, HK97 family {ECO:0000313|EMBL:EDM52611.1}; TaxID=411463 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Eubacteriaceae; Eubacterium.;" source="Eubacterium ventriosum ATCC 27560.;"
hypothetical protein
Displaying 21 items

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