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L3_102_000M1_scaffold_643

Search features with annotation key words

Displaying items 1-30 of 37 in total
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
L3_102_000M1_scaffold_643_1
Eubacterium rectale, Eubacterium, Clostridiales, Clostridia, Firmicutes, Bacteria

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2..1927
DNA (1926bp) protein (642aa)
5-methyltetrahydrofolate--homocysteine methyltransferase n=1 Tax=Eubacterium rectale (strain ATCC 33656 / VPI 0990) RepID=C4Z8W4_EUBR3
5-methyltetrahydrofolate--homocysteine methyltransferase
5-methyltetrahydrofolate--homocysteine methyltransferase {ECO:0000313|EMBL:ACR75195.1}; TaxID=515619 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Eubacteriaceae; Eubacterium.;" source="Eubacterium rectale (strain ATCC 33656 / VPI 0990).;"
L3_102_000M1_scaffold_643_2
Eubacterium rectale CAG:36, Eubacterium, Clostridiales, Clostridia, Firmicutes, Bacteria

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2444..3511
DNA (1068bp) protein (356aa)
Guanylate kinase n=1 Tax=Eubacterium rectale CAG:36 RepID=R6TM23_9FIRM
Guanylate kinase {ECO:0000313|EMBL:CDC73285.1}; TaxID=1263079 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Eubacteriaceae; Eubacterium; environmental samples.;" source="Eubacterium rectale CAG:36.;"
Guanylate kinase
L3_102_000M1_scaffold_643_3
Eubacterium rectale CAG:36, Eubacterium, Clostridiales, Clostridia, Firmicutes, Bacteria

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3658..4968
DNA (1311bp) protein (437aa)
O-acetylhomoserine sulfhydrolase (EC:2.5.1.49)
O-acetylhomoserine sulfhydrolase n=2 Tax=Eubacterium RepID=D4JIZ7_9FIRM
O-acetylhomoserine sulfhydrolase {ECO:0000313|EMBL:CDC73287.1}; TaxID=1263079 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Eubacteriaceae; Eubacterium; environmental samples.;" source="Eubacterium rectale CAG:36.;"
L3_102_000M1_scaffold_643_4
Eubacterium rectale, Eubacterium, Clostridiales, Clostridia, Firmicutes, Bacteria

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5213..6196
DNA (984bp) protein (328aa)
Phosphate acetyltransferase n=1 Tax=Eubacterium rectale (strain ATCC 33656 / VPI 0990) RepID=C4Z8W7_EUBR3
phosphate acetyltransferase
Phosphate acetyltransferase {ECO:0000313|EMBL:ACR75198.1}; TaxID=515619 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Eubacteriaceae; Eubacterium.;" source="Eubacterium rectale (strain ATCC 33656 / VPI 0990).;"
L3_102_000M1_scaffold_643_5
Eubacterium rectale CAG:36, Eubacterium, Clostridiales, Clostridia, Firmicutes, Bacteria

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6397..6930
DNA (534bp) protein (178aa)
2-C-methyl-D-erythritol 2,4-cyclodiphosphate synthase {ECO:0000256|HAMAP-Rule:MF_00107, ECO:0000256|RuleBase:RU004395}; Short=MECDP-synthase {ECO:0000256|HAMAP-Rule:MF_00107};; Short=MECPP-synthase {ECO:0000256|HAMAP-Rule:MF_00107};; Short=MECPS {ECO:0000256|HAMAP-Rule:MF_00107};; EC=4.6.1.12 {ECO:0000256|HAMAP-Rule:MF_00107, ECO:0000256|RuleBase:RU004395};; TaxID=1263079 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Eubacteriaceae; Eubacterium; environmental samples.;" source="Eubacterium rectale CAG:36.;"
2-C-methyl-D-erythritol 2,4-cyclodiphosphate synthase n=1 Tax=Eubacterium rectale CAG:36 RepID=R6TZI1_9FIRM
2C-methyl-D-erythritol 2,4-cyclodiphosphate synthase
L3_102_000M1_scaffold_643_6
Eubacterium rectale, Eubacterium, Clostridiales, Clostridia, Firmicutes, Bacteria

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7001..8428
DNA (1428bp) protein (476aa)
Cysteine--tRNA ligase {ECO:0000256|HAMAP-Rule:MF_00041, ECO:0000256|SAAS:SAAS00043703}; EC=6.1.1.16 {ECO:0000256|HAMAP-Rule:MF_00041, ECO:0000256|SAAS:SAAS00043714};; Cysteinyl-tRNA synthetase {ECO:0000256|HAMAP-Rule:MF_00041}; TaxID=657317 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Eubacteriaceae; Eubacterium.;" source="Eubacterium rectale M104/1.;"
Cysteine--tRNA ligase n=1 Tax=Eubacterium rectale M104/1 RepID=D4JIZ4_9FIRM
cysteinyl-tRNA synthetase
L3_102_000M1_scaffold_643_7
Eubacterium rectale, Eubacterium, Clostridiales, Clostridia, Firmicutes, Bacteria

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8430..8858
DNA (429bp) protein (143aa)
Mini-ribonuclease 3 {ECO:0000256|HAMAP-Rule:MF_01468}; Short=Mini-3 {ECO:0000256|HAMAP-Rule:MF_01468};; Short=Mini-RNase 3 {ECO:0000256|HAMAP-Rule:MF_01468};; EC=3.1.26.- {ECO:0000256|HAMAP-Rule:MF_01468};; Mini-RNase III {ECO:0000256|HAMAP-Rule:MF_01468}; TaxID=515619 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Eubacteriaceae; Eubacterium.;" source="Eubacterium rectale (strain ATCC 33656 / VPI 0990).;"
Mini-ribonuclease 3 n=4 Tax=Eubacterium RepID=C4Z8X1_EUBR3
hypothetical protein
L3_102_000M1_scaffold_643_8
Eubacterium rectale, Eubacterium, Clostridiales, Clostridia, Firmicutes, Bacteria

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8878..9645
DNA (768bp) protein (256aa)
rRNA methylase, putative, group 3 {ECO:0000313|EMBL:CBK90163.1}; EC=2.1.1.- {ECO:0000313|EMBL:CBK90163.1};; TaxID=657318 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Eubacteriaceae; Eubacterium.;" source="Eubacterium rectale DSM 17629.;"
rRNA methylase, putative, group 3 n=3 Tax=Eubacterium RepID=D6E423_9FIRM
putative tRNA/rRNA methyltransferase
L3_102_000M1_scaffold_643_9
Eubacterium rectale, Eubacterium, Clostridiales, Clostridia, Firmicutes, Bacteria

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9710..10315
DNA (606bp) protein (202aa)
RNA polymerase factor sigma-70 n=2 Tax=Eubacterium RepID=C4Z8X2_EUBR3
RNA polymerase factor sigma-70
RNA polymerase factor sigma-70 {ECO:0000313|EMBL:ACR75204.1}; TaxID=515619 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Eubacteriaceae; Eubacterium.;" source="Eubacterium rectale (strain ATCC 33656 / VPI 0990).;"
L3_102_000M1_scaffold_643_10
Eubacterium rectale, Eubacterium, Clostridiales, Clostridia, Firmicutes, Bacteria

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10328..10984
DNA (657bp) protein (219aa)
Negative regulator of genetic competence, sporulation and motility n=3 Tax=Eubacterium RepID=D6E422_9FIRM
Negative regulator of genetic competence, sporulation and motility
Uncharacterized protein {ECO:0000313|EMBL:ACR75205.1}; TaxID=515619 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Eubacteriaceae; Eubacterium.;" source="Eubacterium rectale (strain ATCC 33656 / VPI 0990).;"
L3_102_000M1_scaffold_643_11
Eubacterium rectale, Eubacterium, Clostridiales, Clostridia, Firmicutes, Bacteria

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comp(11064..11423)
DNA (360bp) protein (120aa)
Two-component response regulator involved in modulation of flagellar n=4 Tax=Eubacterium RepID=C4Z8X5_EUBR3
Response regulator containing CheY-like receiver, AAA-type ATPase, and DNA-binding domains
Two-component response regulator involved in modulation of flagellar {ECO:0000313|EMBL:ACR75206.1}; TaxID=515619 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Eubacteriaceae; Eubacterium.;" source="Eubacterium rectale (strain ATCC 33656 / VPI 0990).;"
L3_102_000M1_scaffold_643_12
Eubacterium rectale, Eubacterium, Clostridiales, Clostridia, Firmicutes, Bacteria

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comp(11428..12006)
DNA (579bp) protein (193aa)
Chemotaxis protein CheC, inhibitor of MCP methylation n=1 Tax=Eubacterium rectale DSM 17629 RepID=D6E420_9FIRM
Chemotaxis protein CheC, inhibitor of MCP methylation
Chemotaxis protein CheC, inhibitor of MCP methylation {ECO:0000313|EMBL:CBK90160.1}; TaxID=657318 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Eubacteriaceae; Eubacterium.;" source="Eubacterium rectale DSM 17629.;"
L3_102_000M1_scaffold_643_13
Eubacterium rectale, Eubacterium, Clostridiales, Clostridia, Firmicutes, Bacteria

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12137..14044
DNA (1908bp) protein (636aa)
Uncharacterized ABC-type transport system, periplasmic component/surface lipoprotein n=1 Tax=Eubacterium rectale DSM 17629 RepID=D6E419_9FIRM
Uncharacterized ABC-type transport system, periplasmic component/surface lipoprotein
Uncharacterized ABC-type transport system, periplasmic component/surface lipoprotein {ECO:0000313|EMBL:CBK90159.1}; TaxID=657318 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Eubacteriaceae; Eubacterium.;" source="Eubacterium rectale DSM 17629.;"
L3_102_000M1_scaffold_643_14
Eubacterium rectale, Eubacterium, Clostridiales, Clostridia, Firmicutes, Bacteria

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14044..14634
DNA (591bp) protein (197aa)
Predicted phosphoesterases, related to the Icc protein n=3 Tax=Eubacterium RepID=D4JIY7_9FIRM
Predicted phosphoesterases, related to the Icc protein
Uncharacterized protein {ECO:0000313|EMBL:ACR75209.1}; TaxID=515619 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Eubacteriaceae; Eubacterium.;" source="Eubacterium rectale (strain ATCC 33656 / VPI 0990).;"
L3_102_000M1_scaffold_643_15
Eubacterium rectale, Eubacterium, Clostridiales, Clostridia, Firmicutes, Bacteria

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comp(15077..15889)
DNA (813bp) protein (271aa)
Soluble lytic murein transglycosylase and related regulatory proteins (Some contain LysM/invasin domains) n=1 Tax=Eubacterium rectale M104/1 RepID=D4JIY6_9FIRM
Soluble lytic murein transglycosylase and related regulatory proteins (some contain LysM/invasin domains)
Soluble lytic murein transglycosylase and related regulatory proteins (Some contain LysM/invasin domains) {ECO:0000313|EMBL:CBK93583.1}; TaxID=657317 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Eubacteriaceae; Eubacterium.;" source="Eubacterium rectale M104/1.;"
L3_102_000M1_scaffold_643_16
Eubacterium rectale, Eubacterium, Clostridiales, Clostridia, Firmicutes, Bacteria

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16079..17347
DNA (1269bp) protein (423aa)
Diaminopimelate decarboxylase (EC:4.1.1.20)
Diaminopimelate decarboxylase {ECO:0000313|EMBL:CBK93582.1}; EC=4.1.1.20 {ECO:0000313|EMBL:CBK93582.1};; TaxID=657317 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Eubacteriaceae; Eubacterium.;" source="Eubacterium rectale M104/1.;"
Diaminopimelate decarboxylase n=4 Tax=Eubacterium RepID=C4Z8Y0_EUBR3
L3_102_000M1_scaffold_643_17
Eubacterium rectale, Eubacterium, Clostridiales, Clostridia, Firmicutes, Bacteria

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comp(17352..18089)
DNA (738bp) protein (246aa)
Putative uncharacterized protein n=1 Tax=Eubacterium rectale (strain ATCC 33656 / VPI 0990) RepID=C4Z8Y1_EUBR3
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:ACR75212.1}; TaxID=515619 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Eubacteriaceae; Eubacterium.;" source="Eubacterium rectale (strain ATCC 33656 / VPI 0990).;"
L3_102_000M1_scaffold_643_18
Eubacterium rectale, Eubacterium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

18430..18705
DNA (276bp) protein (92aa)
Uncharacterized protein n=4 Tax=Eubacterium RepID=R6TZL4_9FIRM
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:ACR75213.1}; TaxID=515619 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Eubacteriaceae; Eubacterium.;" source="Eubacterium rectale (strain ATCC 33656 / VPI 0990).;"
L3_102_000M1_scaffold_643_19
Eubacterium rectale, Eubacterium, Clostridiales, Clostridia, Firmicutes, Bacteria

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18712..20685
DNA (1974bp) protein (658aa)
hypothetical protein (EC:3.1.3.11)
Fructose-1,6-bisphosphatase class 3 {ECO:0000256|HAMAP-Rule:MF_01854}; Short=FBPase class 3 {ECO:0000256|HAMAP-Rule:MF_01854};; EC=3.1.3.11 {ECO:0000256|HAMAP-Rule:MF_01854};; D-fructose-1,6-bisphosphate 1-phosphohydrolase class 3 {ECO:0000256|HAMAP-Rule:MF_01854}; TaxID=515619 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Eubacteriaceae; Eubacterium.;" source="Eubacterium rectale (strain ATCC 33656 / VPI 0990).;"
Fructose-1,6-bisphosphatase class 3 n=3 Tax=Eubacterium rectale RepID=C4Z8Y3_EUBR3
L3_102_000M1_scaffold_643_20
Eubacterium rectale, Eubacterium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

20700..21239
DNA (540bp) protein (180aa)
Uncharacterized protein n=4 Tax=Eubacterium RepID=R6TZM1_9FIRM
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:ACR75215.1}; TaxID=515619 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Eubacteriaceae; Eubacterium.;" source="Eubacterium rectale (strain ATCC 33656 / VPI 0990).;"
L3_102_000M1_scaffold_643_21
Eubacterium rectale CAG:36, Eubacterium, Clostridiales, Clostridia, Firmicutes, Bacteria

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21227..21907
DNA (681bp) protein (227aa)
Uncharacterized protein n=2 Tax=Eubacterium RepID=R6TIT0_9FIRM
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:CDC73328.1}; TaxID=1263079 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Eubacteriaceae; Eubacterium; environmental samples.;" source="Eubacterium rectale CAG:36.;"
L3_102_000M1_scaffold_643_22
Eubacterium rectale, Eubacterium, Clostridiales, Clostridia, Firmicutes, Bacteria

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21952..23427
DNA (1476bp) protein (492aa)
Histidine kinase {ECO:0000256|SAAS:SAAS00251121}; EC=2.7.13.3 {ECO:0000256|SAAS:SAAS00251121};; TaxID=515619 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Eubacteriaceae; Eubacterium.;" source="Eubacterium rectale (strain ATCC 33656 / VPI 0990).;"
Sensor histidine kinase n=4 Tax=Eubacterium RepID=C4Z8Y6_EUBR3
His Kinase A (phosphoacceptor) domain./Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase./HAMP domain.
L3_102_000M1_scaffold_643_23
Eubacterium rectale, Eubacterium, Clostridiales, Clostridia, Firmicutes, Bacteria

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23487..24224
DNA (738bp) protein (246aa)
Telomeric repeat-binding factor 2 n=3 Tax=Eubacterium rectale RepID=D4JIX9_9FIRM
Telomeric repeat-binding factor 2.
Uncharacterized protein {ECO:0000313|EMBL:ACR75218.1}; TaxID=515619 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Eubacteriaceae; Eubacterium.;" source="Eubacterium rectale (strain ATCC 33656 / VPI 0990).;"
L3_102_000M1_scaffold_643_24
Eubacterium rectale, Eubacterium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

24268..25167
DNA (900bp) protein (300aa)
Modulation of CheA activity in response to attractants (Chemotaxis protein) n=4 Tax=Eubacterium RepID=C4Z8Y8_EUBR3
Chemotaxis signal transduction protein
Modulation of CheA activity in response to attractants (Chemotaxis protein) {ECO:0000313|EMBL:ACR75219.1}; TaxID=515619 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Eubacteriaceae; Eubacterium.;" source="Eubacterium rectale (strain ATCC 33656 / VPI 0990).;"
L3_102_000M1_scaffold_643_25
Eubacterium rectale, Eubacterium, Clostridiales, Clostridia, Firmicutes, Bacteria

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25237..26772
DNA (1536bp) protein (512aa)
Putative uncharacterized protein n=2 Tax=Eubacterium rectale RepID=C4Z8Y9_EUBR3
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:ACR75220.1}; TaxID=515619 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Eubacteriaceae; Eubacterium.;" source="Eubacterium rectale (strain ATCC 33656 / VPI 0990).;"
L3_102_000M1_scaffold_643_26
Eubacterium rectale CAG:36, Eubacterium, Clostridiales, Clostridia, Firmicutes, Bacteria

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26774..27388
DNA (615bp) protein (205aa)
Imidazole glycerol phosphate synthase subunit HisH {ECO:0000256|HAMAP-Rule:MF_00278}; EC=2.4.2.- {ECO:0000256|HAMAP-Rule:MF_00278};; IGP synthase glutamine amidotransferase subunit {ECO:0000256|HAMAP-Rule:MF_00278}; IGP synthase subunit HisH {ECO:0000256|HAMAP-Rule:MF_00278}; ImGP synthase subunit HisH {ECO:0000256|HAMAP-Rule:MF_00278}; TaxID=1263079 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Eubacteriaceae; Eubacterium; environmental samples.;" source="Eubacterium rectale CAG:36.;"
Imidazole glycerol phosphate synthase subunit HisH n=1 Tax=Eubacterium rectale CAG:36 RepID=R6URC9_9FIRM
hisH; imidazole glycerol phosphate synthase subunit HisH
L3_102_000M1_scaffold_643_27
Eubacterium rectale, Eubacterium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

27390..28151
DNA (762bp) protein (254aa)
imidazoleglycerol phosphate synthase, cyclase subunit (EC:4.1.3.-)
Imidazole glycerol phosphate synthase subunit HisF {ECO:0000256|HAMAP-Rule:MF_01013}; EC=4.1.3.- {ECO:0000256|HAMAP-Rule:MF_01013, ECO:0000313|EMBL:CBK93571.1};; IGP synthase cyclase subunit {ECO:0000256|HAMAP-Rule:MF_01013}; IGP synthase subunit HisF {ECO:0000256|HAMAP-Rule:MF_01013}; ImGP synthase subunit HisF {ECO:0000256|HAMAP-Rule:MF_01013}; TaxID=657317 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Eubacteriaceae; Eubacterium.;" source="Eubacterium rectale M104/1.;"
Imidazole glycerol phosphate synthase subunit HisF n=3 Tax=Eubacterium RepID=D4JIX4_9FIRM
L3_102_000M1_scaffold_643_28
Eubacterium rectale CAG:36, Eubacterium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

28168..28845
DNA (678bp) protein (226aa)
Uracil-DNA glycosylase {ECO:0000256|HAMAP-Rule:MF_00148, ECO:0000256|RuleBase:RU003780}; Short=UDG {ECO:0000256|HAMAP-Rule:MF_00148};; EC=3.2.2.27 {ECO:0000256|HAMAP-Rule:MF_00148, ECO:0000256|RuleBase:RU003780};; TaxID=1263079 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Eubacteriaceae; Eubacterium; environmental samples.;" source="Eubacterium rectale CAG:36.;"
Uracil-DNA glycosylase n=1 Tax=Eubacterium rectale CAG:36 RepID=R6TIU8_9FIRM
uracil-DNA glycosylase
L3_102_000M1_scaffold_643_29
Eubacterium rectale, Eubacterium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

28988..29707
DNA (720bp) protein (240aa)
Flagellar hook-associated protein 2 C-terminus n=3 Tax=Eubacterium RepID=D4JIX2_9FIRM
Flagellar hook-associated protein 2 C-terminus.
Flagellar hook-associated protein 2 C-terminus {ECO:0000313|EMBL:CBK90144.1}; TaxID=657318 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Eubacteriaceae; Eubacterium.;" source="Eubacterium rectale DSM 17629.;"
L3_102_000M1_scaffold_643_30
Eubacterium rectale CAG:36, Eubacterium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(29799..31439)
DNA (1641bp) protein (547aa)
ATPase components of ABC transporters with duplicated ATPase domains n=1 Tax=Eubacterium rectale CAG:36 RepID=R6TZP7_9FIRM
ATPase components of ABC transporters with duplicated ATPase domains {ECO:0000313|EMBL:CDC73351.1}; TaxID=1263079 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Eubacteriaceae; Eubacterium; environmental samples.;" source="Eubacterium rectale CAG:36.;"
ATPase components of ABC transporters with duplicated ATPase domains
Displaying items 1-30 of 37 in total

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