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L3_102_000M1_scaffold_5058

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Displaying 9 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
L3_102_000M1_scaffold_5058_1
Clostridium sp. ATCC BAA-442, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

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2..391
DNA (390bp) protein (130aa)
Peptidase propeptide and YPEB domain protein (Fragment) n=1 Tax=Clostridium sp. ATCC BAA-442 RepID=U2C0F5_9CLOT
Peptidase propeptide and YPEB domain protein {ECO:0000313|EMBL:ERI77985.1}; Flags: Fragment;; TaxID=649724 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium sp. ATCC BAA-442.;"
L3_102_000M1_scaffold_5058_2
Anaerovibrio lipolyticus, Anaerovibrio, Selenomonadales, Negativicutes, Firmicutes, Bacteria

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comp(695..2146)
DNA (1452bp) protein (484aa)
hypothetical protein n=1 Tax=Zymophilus raffinosivorans RepID=UPI000363DBCE
Peptidase M20 {ECO:0000313|EMBL:KHM52237.1}; TaxID=82374 species="Bacteria; Firmicutes; Negativicutes; Selenomonadales; Veillonellaceae; Anaerovibrio.;" source="Anaerovibrio lipolyticus.;"
pepD; putative aminoacylhistidine dipeptidase
L3_102_000M1_scaffold_5058_3
Archaeoglobus profundus, Archaeoglobus, Archaeoglobales, Archaeoglobi, Euryarchaeota, Archaea

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comp(2159..2653)
DNA (495bp) protein (165aa)
Permease for cytosine/purines uracil thiamine allantoin n=1 Tax=Archaeoglobus profundus (strain DSM 5631 / JCM 9629 / NBRC 100127 / Av18) RepID=D2REB3_ARCPA
cytosine/purines uracil thiamine allantoin permease
Permease for cytosine/purines uracil thiamine allantoin {ECO:0000313|EMBL:ADB58457.1}; TaxID=572546 species="Archaea; Euryarchaeota; Archaeoglobi; Archaeoglobales; Archaeoglobaceae; Archaeoglobus.;" source="Archaeoglobus profundus (strain DSM 5631 / JCM 9629 / NBRC 100127 /; Av18).;"
L3_102_000M1_scaffold_5058_4
Pseudoflavonifractor capillosus, Pseudoflavonifractor, Clostridiales, Clostridia, Firmicutes, Bacteria

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2676..2924
DNA (249bp) protein (83aa)
Uncharacterized protein n=1 Tax=Pseudoflavonifractor capillosus ATCC 29799 RepID=A6NWJ8_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:EDM99535.1}; TaxID=411467 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Pseudoflavonifractor.;" source="Pseudoflavonifractor capillosus ATCC 29799.;"
hypothetical protein
L3_102_000M1_scaffold_5058_5
Flavobacterium sp. MEB061, Flavobacterium, Flavobacteriales, Flavobacteriia, Bacteroidetes, Bacteria

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comp(2976..3563)
DNA (588bp) protein (196aa)
Uncharacterized protein n=1 Tax=Bacteroides sp. CAG:545 RepID=R5RS68_9BACE
Contig_2, whole genome shotgun sequence {ECO:0000313|EMBL:KIQ25469.1}; TaxID=1587524 species="Bacteria; Bacteroidetes; Flavobacteriia; Flavobacteriales; Flavobacteriaceae; Flavobacterium.;" source="Flavobacterium sp. MEB061.;"
PKD domain containing protein
L3_102_000M1_scaffold_5058_6
Clostridium sp. CAG:245, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

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comp(3970..4524)
DNA (555bp) protein (185aa)
Uncharacterized protein n=1 Tax=Clostridium sp. CAG:245 RepID=R6B7T8_9CLOT
Uncharacterized protein {ECO:0000313|EMBL:CDA59270.1}; TaxID=1262784 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium; environmental samples.;" source="Clostridium sp. CAG:245.;"
hypothetical protein
L3_102_000M1_scaffold_5058_7
Oscillibacter sp. CAG:241, Oscillibacter, Clostridiales, Clostridia, Firmicutes, Bacteria

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4819..5556
DNA (738bp) protein (246aa)
Uncharacterized protein n=1 Tax=Oscillibacter sp. CAG:241 RepID=R6HMS7_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:CDB27222.1}; TaxID=1262911 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Oscillospiraceae; Oscillibacter; environmental samples.;" source="Oscillibacter sp. CAG:241.;"
L3_102_000M1_scaffold_5058_8
Oscillibacter sp. CAG:241, Oscillibacter, Clostridiales, Clostridia, Firmicutes, Bacteria

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5648..6349
DNA (702bp) protein (234aa)
Response regulators consisting of a CheY-like receiver domain and a winged-helix DNA-binding domain n=1 Tax=Oscillibacter sp. CAG:241 RepID=R6GP47_9FIRM
Response regulators consisting of a CheY-like receiver domain and a winged-helix DNA-binding domain {ECO:0000313|EMBL:CDB27223.1}; TaxID=1262911 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Oscillospiraceae; Oscillibacter; environmental samples.;" source="Oscillibacter sp. CAG:241.;"
Response regulators consisting of a CheY-like receiver domain and a winged-helix DNA-binding domain
L3_102_000M1_scaffold_5058_9
Oscillibacter sp. CAG:241, Oscillibacter, Clostridiales, Clostridia, Firmicutes, Bacteria

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6346..7569
DNA (1224bp) protein (408aa)
Histidine kinase {ECO:0000256|SAAS:SAAS00251121}; EC=2.7.13.3 {ECO:0000256|SAAS:SAAS00251121};; TaxID=1262911 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Oscillospiraceae; Oscillibacter; environmental samples.;" source="Oscillibacter sp. CAG:241.;"
His Kinase A (Phosphoacceptor) domain./Histidine kinase-DNA gyrase B-and HSP90-like ATPase n=1 Tax=Oscillibacter sp. CAG:241 RepID=R6GZS3_9FIRM
His Kinase A (phosphoacceptor) domain./Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase.
Displaying 9 items

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