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L3_102_000M1_scaffold_2042

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Displaying 23 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
L3_102_000M1_scaffold_2042_1
Firmicutes bacterium CAG:110, Firmicutes, Bacteria

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comp(3..1589)
DNA (1587bp) protein (529aa)
Repeat protein n=1 Tax=Firmicutes bacterium CAG:110 RepID=R5EN80_9FIRM
Repeat protein {ECO:0000313|EMBL:CCX90052.1}; TaxID=1263000 species="Bacteria; Firmicutes; environmental samples.;" source="Firmicutes bacterium CAG:110.;"
pre-peptidase C family protein
L3_102_000M1_scaffold_2042_2
Firmicutes bacterium CAG:176, Firmicutes, Bacteria

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1771..2577
DNA (807bp) protein (269aa)
Transcriptional regulator MerR family n=1 Tax=Firmicutes bacterium CAG:176 RepID=R6D959_9FIRM
Transcriptional regulator MerR family {ECO:0000313|EMBL:CDA81504.1}; TaxID=1263007 species="Bacteria; Firmicutes; environmental samples.;" source="Firmicutes bacterium CAG:176.;"
transcriptional regulator, MerR family
L3_102_000M1_scaffold_2042_3
Firmicutes bacterium CAG:176, Firmicutes, Bacteria

Not on your lists

comp(2651..3835)
DNA (1185bp) protein (395aa)
Amidohydrolase n=1 Tax=Firmicutes bacterium CAG:176 RepID=R6D1A4_9FIRM
Amidohydrolase {ECO:0000313|EMBL:CDA81505.1}; TaxID=1263007 species="Bacteria; Firmicutes; environmental samples.;" source="Firmicutes bacterium CAG:176.;"
amidohydrolase
L3_102_000M1_scaffold_2042_4
Firmicutes bacterium CAG:176, Firmicutes, Bacteria

Not on your lists

comp(3872..5053)
DNA (1182bp) protein (394aa)
Uncharacterized protein n=1 Tax=Firmicutes bacterium CAG:176 RepID=R6DBI0_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:CDA81506.1}; TaxID=1263007 species="Bacteria; Firmicutes; environmental samples.;" source="Firmicutes bacterium CAG:176.;"
hypothetical protein
L3_102_000M1_scaffold_2042_5
Firmicutes bacterium CAG:176, Firmicutes, Bacteria

Not on your lists

comp(5174..5329)
DNA (156bp) protein (52aa)
Uncharacterized protein n=1 Tax=Firmicutes bacterium CAG:176 RepID=R6DUC7_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:CDA81507.1}; TaxID=1263007 species="Bacteria; Firmicutes; environmental samples.;" source="Firmicutes bacterium CAG:176.;"
L3_102_000M1_scaffold_2042_6
Firmicutes bacterium CAG:176, Firmicutes, Bacteria

Not on your lists

5808..6665
DNA (858bp) protein (286aa)
serine O-acetyltransferase (EC:2.3.1.30)
Uncharacterized protein n=1 Tax=Firmicutes bacterium CAG:176 RepID=R6CYH1_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:CDA81508.1}; TaxID=1263007 species="Bacteria; Firmicutes; environmental samples.;" source="Firmicutes bacterium CAG:176.;"
L3_102_000M1_scaffold_2042_7
Firmicutes bacterium CAG:176, Firmicutes, Bacteria

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6860..7339
DNA (480bp) protein (160aa)
Putative hydrolase n=1 Tax=Firmicutes bacterium CAG:176 RepID=R6D964_9FIRM
Putative hydrolase {ECO:0000313|EMBL:CDA81509.1}; TaxID=1263007 species="Bacteria; Firmicutes; environmental samples.;" source="Firmicutes bacterium CAG:176.;"
putative hydrolase
L3_102_000M1_scaffold_2042_8
Firmicutes bacterium CAG:176, Firmicutes, Bacteria

Not on your lists

7401..8669
DNA (1269bp) protein (423aa)
UPF0597 protein BN516_01482 n=1 Tax=Firmicutes bacterium CAG:176 RepID=R6D1A8_9FIRM
UPF0597 protein BN516_01482 {ECO:0000256|HAMAP-Rule:MF_01845}; TaxID=1263007 species="Bacteria; Firmicutes; environmental samples.;" source="Firmicutes bacterium CAG:176.;"
hypothetical protein
L3_102_000M1_scaffold_2042_9
Firmicutes bacterium CAG:240, Firmicutes, Bacteria

Not on your lists

comp(8763..10274)
DNA (1512bp) protein (504aa)
Uncharacterized protein n=1 Tax=Firmicutes bacterium CAG:240 RepID=R6IDX0_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:CDB43556.1}; TaxID=1263013 species="Bacteria; Firmicutes; environmental samples.;" source="Firmicutes bacterium CAG:240.;"
hypothetical protein
L3_102_000M1_scaffold_2042_10
Flavonifractor plautii, Flavonifractor, Clostridiales, Clostridia, Firmicutes, Bacteria

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comp(10267..10803)
DNA (537bp) protein (179aa)
Putative RNA polymerase ECF-type sigma factor n=1 Tax=Firmicutes bacterium CAG:240 RepID=R6J048_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:KGF55109.1}; TaxID=742738 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Flavonifractor.;" source="Clostridium orbiscindens 1_3_50AFAA.;"
ECF subfamily RNA polymerase sigma-24 factor
L3_102_000M1_scaffold_2042_11
Firmicutes bacterium CAG:176, Firmicutes, Bacteria

Not on your lists


comp(10920..11171)
DNA (252bp) protein (84aa)
30S ribosomal protein S18 n=1 Tax=Firmicutes bacterium CAG:176 RepID=R6D2L3_9FIRM
30S ribosomal protein S18 {ECO:0000256|HAMAP-Rule:MF_00270}; TaxID=1263007 species="Bacteria; Firmicutes; environmental samples.;" source="Firmicutes bacterium CAG:176.;"
rpsR; 30S ribosomal protein S18
L3_102_000M1_scaffold_2042_12
Firmicutes bacterium CAG:176, Firmicutes, Bacteria

Not on your lists

comp(11214..11687)
DNA (474bp) protein (158aa)
Single-stranded DNA-binding protein n=1 Tax=Firmicutes bacterium CAG:176 RepID=R6DCZ8_9FIRM
Single-stranded DNA-binding protein {ECO:0000256|HAMAP-Rule:MF_00984, ECO:0000256|PIRNR:PIRNR002070}; Short=SSB {ECO:0000256|HAMAP-Rule:MF_00984};; TaxID=1263007 species="Bacteria; Firmicutes; environmental samples.;" source="Firmicutes bacterium CAG:176.;"
ssb; single-stranded DNA-binding protein
L3_102_000M1_scaffold_2042_13
Firmicutes bacterium CAG:176, Firmicutes, Bacteria

Not on your lists


comp(11700..11996)
DNA (297bp) protein (99aa)
30S ribosomal protein S6 n=1 Tax=Firmicutes bacterium CAG:176 RepID=R6DVT1_9FIRM
30S ribosomal protein S6 {ECO:0000256|HAMAP-Rule:MF_00360}; TaxID=1263007 species="Bacteria; Firmicutes; environmental samples.;" source="Firmicutes bacterium CAG:176.;"
rpsF; 30S ribosomal protein S6
L3_102_000M1_scaffold_2042_14
Firmicutes bacterium CAG:176, Firmicutes, Bacteria

Not on your lists

12264..13463
DNA (1200bp) protein (400aa)
putative threonine dehydratase (EC:4.3.1.19)
Putative threonine dehydratase n=1 Tax=Firmicutes bacterium CAG:176 RepID=R6D061_9FIRM
Putative threonine dehydratase {ECO:0000313|EMBL:CDA82048.1}; TaxID=1263007 species="Bacteria; Firmicutes; environmental samples.;" source="Firmicutes bacterium CAG:176.;"
L3_102_000M1_scaffold_2042_15
Firmicutes bacterium CAG:176, Firmicutes, Bacteria

Not on your lists

comp(13505..14686)
DNA (1182bp) protein (394aa)
UPF0348 protein BN516_00053 n=1 Tax=Firmicutes bacterium CAG:176 RepID=R6DAR5_9FIRM
UPF0348 protein BN516_00053 {ECO:0000256|HAMAP-Rule:MF_01539}; TaxID=1263007 species="Bacteria; Firmicutes; environmental samples.;" source="Firmicutes bacterium CAG:176.;"
hypothetical protein
L3_102_000M1_scaffold_2042_16
Firmicutes bacterium CAG:176, Firmicutes, Bacteria

Not on your lists

14802..15470
DNA (669bp) protein (223aa)
mtn; 5'-methylthioadenosine/S-adenosylhomocysteine nucleosidase (EC:3.2.2.16 3.2.2.9)
5'-methylthioadenosine/S-adenosylhomocysteine nucleosidase n=1 Tax=Firmicutes bacterium CAG:176 RepID=R6D2L8_9FIRM
5'-methylthioadenosine/S-adenosylhomocysteine nucleosidase {ECO:0000313|EMBL:CDA82050.1}; TaxID=1263007 species="Bacteria; Firmicutes; environmental samples.;" source="Firmicutes bacterium CAG:176.;"
L3_102_000M1_scaffold_2042_17
Firmicutes bacterium CAG:176, Firmicutes, Bacteria

Not on your lists

15473..15940
DNA (468bp) protein (156aa)
S-ribosylhomocysteine lyase {ECO:0000256|SAAS:SAAS00059609}; EC=4.4.1.21 {ECO:0000256|SAAS:SAAS00059628};; TaxID=1263007 species="Bacteria; Firmicutes; environmental samples.;" source="Firmicutes bacterium CAG:176.;"
LuxS protein involved in autoinducer AI2 synthesis (EC:4.4.1.21)
LuxS protein involved in autoinducer AI2 synthesis n=1 Tax=Firmicutes bacterium CAG:176 RepID=R6DD03_9FIRM
L3_102_000M1_scaffold_2042_18
Firmicutes bacterium CAG:176, Firmicutes, Bacteria

Not on your lists


16111..16422
DNA (312bp) protein (104aa)
50S ribosomal protein L21 n=1 Tax=Firmicutes bacterium CAG:176 RepID=R6DVT4_9FIRM
50S ribosomal protein L21 {ECO:0000256|HAMAP-Rule:MF_01363, ECO:0000256|RuleBase:RU000562}; TaxID=1263007 species="Bacteria; Firmicutes; environmental samples.;" source="Firmicutes bacterium CAG:176.;"
rplU; 50S ribosomal protein L21
L3_102_000M1_scaffold_2042_19
Firmicutes bacterium CAG:176, Firmicutes, Bacteria

Not on your lists

16430..16759
DNA (330bp) protein (110aa)
Uncharacterized protein n=1 Tax=Firmicutes bacterium CAG:176 RepID=R6D063_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:CDA82053.1}; TaxID=1263007 species="Bacteria; Firmicutes; environmental samples.;" source="Firmicutes bacterium CAG:176.;"
hypothetical protein
L3_102_000M1_scaffold_2042_20
Firmicutes bacterium CAG:176, Firmicutes, Bacteria

Not on your lists


16803..17084
DNA (282bp) protein (94aa)
50S ribosomal protein L27 n=1 Tax=Firmicutes bacterium CAG:176 RepID=R6D8L8_9FIRM
50S ribosomal protein L27 {ECO:0000256|HAMAP-Rule:MF_00539}; TaxID=1263007 species="Bacteria; Firmicutes; environmental samples.;" source="Firmicutes bacterium CAG:176.;"
rpsT; ribosomal protein S20
L3_102_000M1_scaffold_2042_21
Firmicutes bacterium CAG:176, Firmicutes, Bacteria

Not on your lists

17208..18488
DNA (1281bp) protein (427aa)
GTPase Obg n=1 Tax=Firmicutes bacterium CAG:176 RepID=R6CXW3_9FIRM
GTPase Obg {ECO:0000256|HAMAP-Rule:MF_01454}; GTP-binding protein Obg {ECO:0000256|HAMAP-Rule:MF_01454}; TaxID=1263007 species="Bacteria; Firmicutes; environmental samples.;" source="Firmicutes bacterium CAG:176.;"
obg; GTP-binding protein Obg
L3_102_000M1_scaffold_2042_22
Firmicutes bacterium CAG:176, Firmicutes, Bacteria

Not on your lists

comp(18542..18721)
DNA (180bp) protein (60aa)
Uncharacterized protein n=1 Tax=Firmicutes bacterium CAG:176 RepID=R6DTU4_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:CDA81367.1}; TaxID=1263007 species="Bacteria; Firmicutes; environmental samples.;" source="Firmicutes bacterium CAG:176.;"
L3_102_000M1_scaffold_2042_23
Firmicutes bacterium CAG:176, Firmicutes, Bacteria

Not on your lists

comp(18771..19073)
DNA (303bp) protein (101aa)
Uncharacterized protein n=1 Tax=Firmicutes bacterium CAG:176 RepID=R6DB04_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:CDA81366.1}; TaxID=1263007 species="Bacteria; Firmicutes; environmental samples.;" source="Firmicutes bacterium CAG:176.;"
hypothetical protein
Displaying 23 items

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