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L3_102_000M1_scaffold_2089

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Displaying 13 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
L3_102_000M1_scaffold_2089_1
Collinsella sp. CAG:289, Collinsella, Coriobacteriales, Coriobacteriia, Actinobacteria, Bacteria

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352..2832
DNA (2481bp) protein (827aa)
Uncharacterized protein n=1 Tax=Collinsella sp. CAG:289 RepID=R7D5R1_9ACTN
Uncharacterized protein {ECO:0000313|EMBL:CDD85128.1}; TaxID=1262851 species="Bacteria; Actinobacteria; Coriobacteriia; Coriobacteriales; Coriobacteriaceae; Collinsella; environmental samples.;" source="Collinsella sp. CAG:289.;"
Bacterial Ig-like domain (group 3).
L3_102_000M1_scaffold_2089_2
Firmicutes bacterium CAG:176, Firmicutes, Bacteria

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2918..3796
DNA (879bp) protein (293aa)
Transcriptional regulator GntR family n=1 Tax=Firmicutes bacterium CAG:176 RepID=R6CYT8_9FIRM
Transcriptional regulator GntR family {ECO:0000313|EMBL:CDA81653.1}; TaxID=1263007 species="Bacteria; Firmicutes; environmental samples.;" source="Firmicutes bacterium CAG:176.;"
GntR family transcriptional regulator
L3_102_000M1_scaffold_2089_3
Firmicutes bacterium CAG:176, Firmicutes, Bacteria

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4025..5428
DNA (1404bp) protein (468aa)
Dihydroorotase multifunctional complex type n=1 Tax=Firmicutes bacterium CAG:176 RepID=R6D9H5_9FIRM
Dihydroorotase multifunctional complex type {ECO:0000313|EMBL:CDA81654.1}; TaxID=1263007 species="Bacteria; Firmicutes; environmental samples.;" source="Firmicutes bacterium CAG:176.;"
dihydroorotase, multifunctional complex type
L3_102_000M1_scaffold_2089_4
Firmicutes bacterium CAG:176, Firmicutes, Bacteria

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5820..6815
DNA (996bp) protein (332aa)
Transcriptional regulator LacI family n=1 Tax=Firmicutes bacterium CAG:176 RepID=R6D1J2_9FIRM
Transcriptional regulator LacI family {ECO:0000313|EMBL:CDA81655.1}; TaxID=1263007 species="Bacteria; Firmicutes; environmental samples.;" source="Firmicutes bacterium CAG:176.;"
Transcriptional regulator, LacI family
L3_102_000M1_scaffold_2089_5
Firmicutes bacterium CAG:176, Firmicutes, Bacteria

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6877..7869
DNA (993bp) protein (331aa)
Xylose isomerase domain-containing protein TIM barrel n=1 Tax=Firmicutes bacterium CAG:176 RepID=R6DBU8_9FIRM
Xylose isomerase domain-containing protein TIM barrel {ECO:0000313|EMBL:CDA81656.1}; TaxID=1263007 species="Bacteria; Firmicutes; environmental samples.;" source="Firmicutes bacterium CAG:176.;"
sugar phosphate isomerase/epimerase
L3_102_000M1_scaffold_2089_6
Firmicutes bacterium CAG:176, Firmicutes, Bacteria

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7890..9038
DNA (1149bp) protein (383aa)
Oxidoreductase domain protein n=1 Tax=Firmicutes bacterium CAG:176 RepID=R6DUP4_9FIRM
Oxidoreductase domain protein {ECO:0000313|EMBL:CDA81657.1}; TaxID=1263007 species="Bacteria; Firmicutes; environmental samples.;" source="Firmicutes bacterium CAG:176.;"
dehydrogenase
L3_102_000M1_scaffold_2089_7
Firmicutes bacterium CAG:176, Firmicutes, Bacteria

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9098..10174
DNA (1077bp) protein (359aa)
Periplasmic binding protein and sugar binding domain of the LacI family protein n=1 Tax=Firmicutes bacterium CAG:176 RepID=R6CYU3_9FIRM
Periplasmic binding protein and sugar binding domain of the LacI family protein {ECO:0000313|EMBL:CDA81658.1}; TaxID=1263007 species="Bacteria; Firmicutes; environmental samples.;" source="Firmicutes bacterium CAG:176.;"
sugar ABC transporter periplasmic protein
L3_102_000M1_scaffold_2089_8
Firmicutes bacterium CAG:176, Firmicutes, Bacteria

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10276..11784
DNA (1509bp) protein (503aa)
ABC-type sugar transport system, ATPase component (EC:3.6.3.17)
ABC transporter ATP-binding protein n=1 Tax=Firmicutes bacterium CAG:176 RepID=R6D9I0_9FIRM
ABC transporter ATP-binding protein {ECO:0000313|EMBL:CDA81659.1}; TaxID=1263007 species="Bacteria; Firmicutes; environmental samples.;" source="Firmicutes bacterium CAG:176.;"
L3_102_000M1_scaffold_2089_9
Firmicutes bacterium CAG:176, Firmicutes, Bacteria

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11781..12827
DNA (1047bp) protein (349aa)
Inner-membrane translocator n=1 Tax=Firmicutes bacterium CAG:176 RepID=R6D1J4_9FIRM
Inner-membrane translocator {ECO:0000313|EMBL:CDA81660.1}; TaxID=1263007 species="Bacteria; Firmicutes; environmental samples.;" source="Firmicutes bacterium CAG:176.;"
inner-membrane translocator
L3_102_000M1_scaffold_2089_10
Firmicutes bacterium CAG:176, Firmicutes, Bacteria

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12832..14139
DNA (1308bp) protein (436aa)
Xylose isomerase {ECO:0000256|HAMAP-Rule:MF_00455, ECO:0000256|RuleBase:RU000609}; EC=5.3.1.5 {ECO:0000256|HAMAP-Rule:MF_00455, ECO:0000256|RuleBase:RU000609};; TaxID=1263007 species="Bacteria; Firmicutes; environmental samples.;" source="Firmicutes bacterium CAG:176.;"
xylA; Xylose isomerase (EC:5.3.1.5)
Xylose isomerase n=1 Tax=Firmicutes bacterium CAG:176 RepID=R6DBV3_9FIRM
L3_102_000M1_scaffold_2089_11
Firmicutes bacterium CAG:176, Firmicutes, Bacteria

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14199..15740
DNA (1542bp) protein (514aa)
xylB; xylulose kinase (EC:2.7.1.17)
Xylulose kinase n=1 Tax=Firmicutes bacterium CAG:176 RepID=R6DUP7_9FIRM
Xylulose kinase {ECO:0000313|EMBL:CDA81662.1}; TaxID=1263007 species="Bacteria; Firmicutes; environmental samples.;" source="Firmicutes bacterium CAG:176.;"
L3_102_000M1_scaffold_2089_12
Firmicutes bacterium CAG:176, Firmicutes, Bacteria

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15737..16951
DNA (1215bp) protein (405aa)
Fucose permease n=1 Tax=Firmicutes bacterium CAG:176 RepID=R6CYU8_9FIRM
Fucose permease {ECO:0000313|EMBL:CDA81663.1}; TaxID=1263007 species="Bacteria; Firmicutes; environmental samples.;" source="Firmicutes bacterium CAG:176.;"
major facilitator family transporter
L3_102_000M1_scaffold_2089_13
Clostridium sp. ATCC BAA-442, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

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comp(17221..17676)
DNA (456bp) protein (152aa)
Uncharacterized protein n=1 Tax=Clostridium sp. ATCC BAA-442 RepID=U2C5N9_9CLOT
Uncharacterized protein {ECO:0000313|EMBL:ERI79840.1}; TaxID=649724 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium sp. ATCC BAA-442.;"
hypothetical protein
Displaying 13 items

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