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L3_102_000M1_scaffold_2519

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Displaying 13 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
L3_102_000M1_scaffold_2519_1
Firmicutes bacterium CAG:176, Firmicutes, Bacteria

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1020..1358
DNA (339bp) protein (113aa)
DNA-binding helix-turn-helix protein n=1 Tax=Firmicutes bacterium CAG:176 RepID=R6D843_9FIRM
DNA-binding helix-turn-helix protein {ECO:0000313|EMBL:CDA81194.1}; TaxID=1263007 species="Bacteria; Firmicutes; environmental samples.;" source="Firmicutes bacterium CAG:176.;"
Predicted transcriptional regulators
L3_102_000M1_scaffold_2519_2
Firmicutes bacterium CAG:176, Firmicutes, Bacteria

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comp(1408..2508)
DNA (1101bp) protein (367aa)
Extracellular solute-binding protein family 1 n=1 Tax=Firmicutes bacterium CAG:176 RepID=R6CXA8_9FIRM
Extracellular solute-binding protein family 1 {ECO:0000313|EMBL:CDA81193.1}; TaxID=1263007 species="Bacteria; Firmicutes; environmental samples.;" source="Firmicutes bacterium CAG:176.;"
extracellular solute-binding protein
L3_102_000M1_scaffold_2519_3
Firmicutes bacterium CAG:176, Firmicutes, Bacteria

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2799..4178
DNA (1380bp) protein (460aa)
Putative efflux protein MATE family n=1 Tax=Firmicutes bacterium CAG:176 RepID=R6DTE0_9FIRM
Putative efflux protein MATE family {ECO:0000313|EMBL:CDA81192.1}; TaxID=1263007 species="Bacteria; Firmicutes; environmental samples.;" source="Firmicutes bacterium CAG:176.;"
putative efflux protein, MATE family
L3_102_000M1_scaffold_2519_4
Firmicutes bacterium CAG:176, Firmicutes, Bacteria

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comp(4225..4893)
DNA (669bp) protein (223aa)
Uncharacterized protein n=1 Tax=Firmicutes bacterium CAG:176 RepID=R6DAJ7_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:CDA81191.1}; TaxID=1263007 species="Bacteria; Firmicutes; environmental samples.;" source="Firmicutes bacterium CAG:176.;"
L3_102_000M1_scaffold_2519_5
Oscillibacter sp. CAG:241, Oscillibacter, Clostridiales, Clostridia, Firmicutes, Bacteria

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5084..7072
DNA (1989bp) protein (663aa)
spoIIE; putative stage II sporulation protein E (EC:3.1.3.16)
Putative stage II sporulation protein E n=1 Tax=Oscillibacter sp. CAG:241 RepID=R6GZ30_9FIRM
Putative stage II sporulation protein E {ECO:0000313|EMBL:CDB26466.1}; TaxID=1262911 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Oscillospiraceae; Oscillibacter; environmental samples.;" source="Oscillibacter sp. CAG:241.;"
L3_102_000M1_scaffold_2519_6
Firmicutes bacterium CAG:83, Firmicutes, Bacteria

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7186..7446
DNA (261bp) protein (87aa)
Uncharacterized protein n=1 Tax=Firmicutes bacterium CAG:83 RepID=R5CWU6_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:CCX72363.1}; TaxID=1262992 species="Bacteria; Firmicutes; environmental samples.;" source="Firmicutes bacterium CAG:83.;"
hypothetical protein
L3_102_000M1_scaffold_2519_7
Firmicutes bacterium CAG:176, Firmicutes, Bacteria

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8053..9195
DNA (1143bp) protein (381aa)
D-alanyl-D-alanine carboxypeptidase (EC:3.4.16.4)
D-alanyl-D-alanine carboxypeptidase n=1 Tax=Firmicutes bacterium CAG:176 RepID=R6D083_9FIRM
D-alanyl-D-alanine carboxypeptidase {ECO:0000313|EMBL:CDA81190.1}; TaxID=1263007 species="Bacteria; Firmicutes; environmental samples.;" source="Firmicutes bacterium CAG:176.;"
L3_102_000M1_scaffold_2519_8
Firmicutes bacterium CAG:176, Firmicutes, Bacteria

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9304..10641
DNA (1338bp) protein (446aa)
Glucose-6-phosphate isomerase {ECO:0000256|HAMAP-Rule:MF_00473, ECO:0000256|RuleBase:RU000612}; Short=GPI {ECO:0000256|HAMAP-Rule:MF_00473};; EC=5.3.1.9 {ECO:0000256|HAMAP-Rule:MF_00473, ECO:0000256|RuleBase:RU000612};; Phosphoglucose isomerase {ECO:0000256|HAMAP-Rule:MF_00473}; Phosphohexose isomerase {ECO:0000256|HAMAP-Rule:MF_00473}; TaxID=1263007 species="Bacteria; Firmicutes; environmental samples.;" source="Firmicutes bacterium CAG:176.;"
pgi; glucose-6-phosphate isomerase (EC:5.3.1.9)
Glucose-6-phosphate isomerase n=1 Tax=Firmicutes bacterium CAG:176 RepID=R6D838_9FIRM
L3_102_000M1_scaffold_2519_9
Firmicutes bacterium CAG:176, Firmicutes, Bacteria

Not on your lists

10745..11155
DNA (411bp) protein (137aa)
Uncharacterized protein n=1 Tax=Firmicutes bacterium CAG:176 RepID=R6CXA3_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:CDA81188.1}; TaxID=1263007 species="Bacteria; Firmicutes; environmental samples.;" source="Firmicutes bacterium CAG:176.;"
hypothetical protein
L3_102_000M1_scaffold_2519_10
Oscillibacter sp. KLE 1745, Oscillibacter, Clostridiales, Clostridia, Firmicutes, Bacteria

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comp(11238..11669)
DNA (432bp) protein (144aa)
Stage V sporulation protein AC n=2 Tax=Oscillibacter RepID=U2QM19_9FIRM
Stage V sporulation protein AC {ECO:0000313|EMBL:ERK66560.1}; TaxID=1226323 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Oscillospiraceae; Oscillibacter.;" source="Oscillibacter sp. KLE 1745.;"
spoVAC; stage V sporulation protein AC
L3_102_000M1_scaffold_2519_11
Firmicutes bacterium CAG:176, Firmicutes, Bacteria

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11784..12014
DNA (231bp) protein (77aa)
Ferredoxin n=1 Tax=Firmicutes bacterium CAG:176 RepID=R6DTD6_9FIRM
Ferredoxin {ECO:0000313|EMBL:CDA81187.1}; TaxID=1263007 species="Bacteria; Firmicutes; environmental samples.;" source="Firmicutes bacterium CAG:176.;"
4Fe-4S ferredoxin iron-sulfur binding domain protein
L3_102_000M1_scaffold_2519_12
Firmicutes bacterium CAG:176, Firmicutes, Bacteria

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12016..13209
DNA (1194bp) protein (398aa)
hemN; oxygen-independent coproporphyrinogen III oxidase (EC:1.3.99.22)
Oxygen-independent coproporphyrinogen III oxidase n=1 Tax=Firmicutes bacterium CAG:176 RepID=R6DAJ4_9FIRM
Oxygen-independent coproporphyrinogen III oxidase {ECO:0000313|EMBL:CDA81186.1}; TaxID=1263007 species="Bacteria; Firmicutes; environmental samples.;" source="Firmicutes bacterium CAG:176.;"
L3_102_000M1_scaffold_2519_13
Firmicutes bacterium CAG:176, Firmicutes, Bacteria

Not on your lists

13602..16370
DNA (2769bp) protein (923aa)
Isoleucine--tRNA ligase {ECO:0000256|HAMAP-Rule:MF_02002, ECO:0000256|SAAS:SAAS00106059}; EC=6.1.1.5 {ECO:0000256|HAMAP-Rule:MF_02002, ECO:0000256|SAAS:SAAS00106059};; Isoleucyl-tRNA synthetase {ECO:0000256|HAMAP-Rule:MF_02002}; TaxID=1263007 species="Bacteria; Firmicutes; environmental samples.;" source="Firmicutes bacterium CAG:176.;"
ileS; isoleucyl-tRNA synthetase (EC:6.1.1.5)
Isoleucine--tRNA ligase n=1 Tax=Firmicutes bacterium CAG:176 RepID=R6D078_9FIRM
Displaying 13 items

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