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L3_102_000M1_scaffold_1961

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*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
L3_102_000M1_scaffold_1961_1
Firmicutes bacterium CAG:102, Firmicutes, Bacteria

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3..557
DNA (555bp) protein (185aa)
Integrase core domain protein n=1 Tax=Firmicutes bacterium CAG:102 RepID=R5AHE4_9FIRM
Integrase core domain protein {ECO:0000313|EMBL:CCX40302.1}; TaxID=1262998 species="Bacteria; Firmicutes; environmental samples.;" source="Firmicutes bacterium CAG:102.;"
integrase catalytic subunit
L3_102_000M1_scaffold_1961_2
Firmicutes bacterium CAG:176, Firmicutes, Bacteria

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comp(596..2020)
DNA (1425bp) protein (475aa)
Stage V sporulation protein AF n=1 Tax=Firmicutes bacterium CAG:176 RepID=R6CZC7_9FIRM
Stage V sporulation protein AF {ECO:0000313|EMBL:CDA81798.1}; TaxID=1263007 species="Bacteria; Firmicutes; environmental samples.;" source="Firmicutes bacterium CAG:176.;"
stage V sporulation protein AF
L3_102_000M1_scaffold_1961_3
Firmicutes bacterium CAG:176, Firmicutes, Bacteria

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2131..3093
DNA (963bp) protein (321aa)
Stage II sporulation protein D n=1 Tax=Firmicutes bacterium CAG:176 RepID=R6DV09_9FIRM
Stage II sporulation protein D {ECO:0000313|EMBL:CDA81797.1}; TaxID=1263007 species="Bacteria; Firmicutes; environmental samples.;" source="Firmicutes bacterium CAG:176.;"
spoIID; stage II sporulation protein D
L3_102_000M1_scaffold_1961_4
Firmicutes bacterium CAG:176, Firmicutes, Bacteria

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3253..3933
DNA (681bp) protein (227aa)
OmpR family two-component response regulator n=1 Tax=Firmicutes bacterium CAG:176 RepID=R6DC58_9FIRM
OmpR family two-component response regulator {ECO:0000313|EMBL:CDA81796.1}; TaxID=1263007 species="Bacteria; Firmicutes; environmental samples.;" source="Firmicutes bacterium CAG:176.;"
OmpR family two-component response regulator
L3_102_000M1_scaffold_1961_5
Firmicutes bacterium CAG:176, Firmicutes, Bacteria

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3936..5399
DNA (1464bp) protein (488aa)
Histidine kinase {ECO:0000256|SAAS:SAAS00155656}; EC=2.7.13.3 {ECO:0000256|SAAS:SAAS00155656};; TaxID=1263007 species="Bacteria; Firmicutes; environmental samples.;" source="Firmicutes bacterium CAG:176.;"
putative two-component histidine kinase (EC:2.7.13.3)
Putative two-component histidine kinase n=1 Tax=Firmicutes bacterium CAG:176 RepID=R6D1V1_9FIRM
L3_102_000M1_scaffold_1961_6
Firmicutes bacterium CAG:176, Firmicutes, Bacteria

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5402..6733
DNA (1332bp) protein (444aa)
serine protease (EC:3.4.21.-)
Serine protease n=1 Tax=Firmicutes bacterium CAG:176 RepID=R6D9W7_9FIRM
Serine protease {ECO:0000313|EMBL:CDA81794.1}; TaxID=1263007 species="Bacteria; Firmicutes; environmental samples.;" source="Firmicutes bacterium CAG:176.;"
L3_102_000M1_scaffold_1961_7
Firmicutes bacterium CAG:176, Firmicutes, Bacteria

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comp(6854..7231)
DNA (378bp) protein (126aa)
Uncharacterized protein n=1 Tax=Firmicutes bacterium CAG:176 RepID=R6CZC2_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:CDA81793.1}; TaxID=1263007 species="Bacteria; Firmicutes; environmental samples.;" source="Firmicutes bacterium CAG:176.;"
hypothetical protein
L3_102_000M1_scaffold_1961_8
Firmicutes bacterium CAG:83, Firmicutes, Bacteria

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comp(7228..7581)
DNA (354bp) protein (118aa)
Uncharacterized protein n=1 Tax=Firmicutes bacterium CAG:83 RepID=R5D709_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:CCX74594.1}; TaxID=1262992 species="Bacteria; Firmicutes; environmental samples.;" source="Firmicutes bacterium CAG:83.;"
hypothetical protein
L3_102_000M1_scaffold_1961_9
Firmicutes bacterium CAG:176, Firmicutes, Bacteria

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comp(7624..7818)
DNA (195bp) protein (65aa)
Uncharacterized protein n=1 Tax=Firmicutes bacterium CAG:176 RepID=R6DC53_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:CDA81791.1}; TaxID=1263007 species="Bacteria; Firmicutes; environmental samples.;" source="Firmicutes bacterium CAG:176.;"
hypothetical protein
L3_102_000M1_scaffold_1961_10
Firmicutes bacterium CAG:176, Firmicutes, Bacteria

Not on your lists

comp(7904..9289)
DNA (1386bp) protein (462aa)
Magnesium transporter n=1 Tax=Firmicutes bacterium CAG:176 RepID=R6D1U6_9FIRM
Magnesium transporter MgtE {ECO:0000256|RuleBase:RU362011}; TaxID=1263007 species="Bacteria; Firmicutes; environmental samples.;" source="Firmicutes bacterium CAG:176.;"
mgtE; magnesium transporter
L3_102_000M1_scaffold_1961_11
Firmicutes bacterium CAG:176, Firmicutes, Bacteria

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comp(9603..10496)
DNA (894bp) protein (298aa)
Uncharacterized protein n=1 Tax=Firmicutes bacterium CAG:176 RepID=R6D9W3_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:CDA81789.1}; TaxID=1263007 species="Bacteria; Firmicutes; environmental samples.;" source="Firmicutes bacterium CAG:176.;"
Transcriptional regulator
L3_102_000M1_scaffold_1961_12
Firmicutes bacterium CAG:176, Firmicutes, Bacteria

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10797..11417
DNA (621bp) protein (207aa)
Predicted membrane protein n=1 Tax=Firmicutes bacterium CAG:176 RepID=R6CZB6_9FIRM
Predicted membrane protein {ECO:0000313|EMBL:CDA81788.1}; TaxID=1263007 species="Bacteria; Firmicutes; environmental samples.;" source="Firmicutes bacterium CAG:176.;"
membrane protein
L3_102_000M1_scaffold_1961_13
Firmicutes bacterium CAG:176, Firmicutes, Bacteria

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comp(11456..11770)
DNA (315bp) protein (105aa)
Multidrug resistance protein SMR family n=1 Tax=Firmicutes bacterium CAG:176 RepID=R6DV00_9FIRM
Multidrug resistance protein SMR family {ECO:0000313|EMBL:CDA81787.1}; TaxID=1263007 species="Bacteria; Firmicutes; environmental samples.;" source="Firmicutes bacterium CAG:176.;"
multidrug transporter
L3_102_000M1_scaffold_1961_14
Firmicutes bacterium CAG:176, Firmicutes, Bacteria

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12027..12701
DNA (675bp) protein (225aa)
Putative DNA repair protein radC n=1 Tax=Firmicutes bacterium CAG:176 RepID=R6DC48_9FIRM
Putative DNA repair protein radC {ECO:0000313|EMBL:CDA81786.1}; TaxID=1263007 species="Bacteria; Firmicutes; environmental samples.;" source="Firmicutes bacterium CAG:176.;"
radC; putative DNA repair protein radC
L3_102_000M1_scaffold_1961_15
Firmicutes bacterium CAG:176, Firmicutes, Bacteria

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12714..14678
DNA (1965bp) protein (655aa)
UvrABC system protein B n=1 Tax=Firmicutes bacterium CAG:176 RepID=R6D1U1_9FIRM
UvrABC system protein B {ECO:0000256|HAMAP-Rule:MF_00204, ECO:0000256|RuleBase:RU003587}; Short=Protein UvrB {ECO:0000256|HAMAP-Rule:MF_00204};; Excinuclease ABC subunit B {ECO:0000256|HAMAP-Rule:MF_00204}; TaxID=1263007 species="Bacteria; Firmicutes; environmental samples.;" source="Firmicutes bacterium CAG:176.;"
uvrB; UvrABC system protein B
L3_102_000M1_scaffold_1961_16
Firmicutes bacterium CAG:176, Firmicutes, Bacteria

Not on your lists

14699..15598
DNA (900bp) protein (300aa)
Uncharacterized protein n=1 Tax=Firmicutes bacterium CAG:176 RepID=R6D9V9_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:CDA81784.1}; TaxID=1263007 species="Bacteria; Firmicutes; environmental samples.;" source="Firmicutes bacterium CAG:176.;"
hypothetical protein
L3_102_000M1_scaffold_1961_17
Firmicutes bacterium CAG:176, Firmicutes, Bacteria

Not on your lists

15571..16281
DNA (711bp) protein (237aa)
Protein TraX n=1 Tax=Firmicutes bacterium CAG:176 RepID=R6CZB2_9FIRM
Protein TraX {ECO:0000313|EMBL:CDA81783.1}; TaxID=1263007 species="Bacteria; Firmicutes; environmental samples.;" source="Firmicutes bacterium CAG:176.;"
TraX protein.
L3_102_000M1_scaffold_1961_18
Firmicutes bacterium CAG:176, Firmicutes, Bacteria

Not on your lists

16303..16785
DNA (483bp) protein (161aa)
Cys-tRNA(Pro)/Cys-tRNA(Cys) deacylase {ECO:0000256|PIRNR:PIRNR006181}; EC=4.2.-.- {ECO:0000256|PIRNR:PIRNR006181};; TaxID=1263007 species="Bacteria; Firmicutes; environmental samples.;" source="Firmicutes bacterium CAG:176.;"
Cys-tRNA(Pro)/Cys-tRNA(Cys) deacylase n=1 Tax=Firmicutes bacterium CAG:176 RepID=R6DUZ5_9FIRM
YbaK family protein
L3_102_000M1_scaffold_1961_19
Firmicutes bacterium CAG:176, Firmicutes, Bacteria

Not on your lists

16865..19690
DNA (2826bp) protein (942aa)
UvrABC system protein A n=1 Tax=Firmicutes bacterium CAG:176 RepID=R6DC43_9FIRM
UvrABC system protein A {ECO:0000256|HAMAP-Rule:MF_00205, ECO:0000256|SAAS:SAAS00088996}; Short=UvrA protein {ECO:0000256|HAMAP-Rule:MF_00205};; Excinuclease ABC subunit A {ECO:0000256|HAMAP-Rule:MF_00205}; TaxID=1263007 species="Bacteria; Firmicutes; environmental samples.;" source="Firmicutes bacterium CAG:176.;"
uvrA; UvrABC system protein A
L3_102_000M1_scaffold_1961_20
Firmicutes bacterium CAG:176, Firmicutes, Bacteria

Not on your lists

19736..20068
DNA (333bp) protein (111aa)
Uncharacterized protein n=1 Tax=Firmicutes bacterium CAG:176 RepID=R6D1T7_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:CDA81780.1}; TaxID=1263007 species="Bacteria; Firmicutes; environmental samples.;" source="Firmicutes bacterium CAG:176.;"
L3_102_000M1_scaffold_1961_21
Firmicutes bacterium CAG:176, Firmicutes, Bacteria

Not on your lists

20073..20201
DNA (129bp) protein (43aa)
ATP-dependent RecD-like DNA helicase {ECO:0000256|HAMAP-Rule:MF_01488}; EC=3.6.4.12 {ECO:0000256|HAMAP-Rule:MF_01488};; TaxID=1263007 species="Bacteria; Firmicutes; environmental samples.;" source="Firmicutes bacterium CAG:176.;"
Putative nuclease n=1 Tax=Firmicutes bacterium CAG:176 RepID=R6D9V4_9FIRM
recombinase D
Displaying 21 items

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