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L3_102_000M1_scaffold_592

Search features with annotation key words

Displaying items 1-30 of 36 in total
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
L3_102_000M1_scaffold_592_1
Clostridium sp. CAG:226, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

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comp(1..4293)
DNA (4293bp) protein (1431aa)
Uncharacterized protein n=1 Tax=Clostridium sp. CAG:226 RepID=R5B5M0_9CLOT
Uncharacterized protein {ECO:0000313|EMBL:CCX49489.1}; TaxID=1262781 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium; environmental samples.;" source="Clostridium sp. CAG:226.;"
cell surface protein
L3_102_000M1_scaffold_592_2
Firmicutes bacterium CAG:176, Firmicutes, Bacteria

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comp(4539..5051)
DNA (513bp) protein (171aa)
Uncharacterized protein n=1 Tax=Firmicutes bacterium CAG:176 RepID=R6DAV2_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:CDA81316.1}; TaxID=1263007 species="Bacteria; Firmicutes; environmental samples.;" source="Firmicutes bacterium CAG:176.;"
L3_102_000M1_scaffold_592_3
Firmicutes bacterium CAG:176, Firmicutes, Bacteria

Not on your lists

comp(6740..7348)
DNA (609bp) protein (203aa)
Uncharacterized protein n=1 Tax=Firmicutes bacterium CAG:176 RepID=R6DTQ1_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:CDA81317.1}; TaxID=1263007 species="Bacteria; Firmicutes; environmental samples.;" source="Firmicutes bacterium CAG:176.;"
L3_102_000M1_scaffold_592_4
Lachnospiraceae bacterium 7_1_58FAA, Clostridiales, Clostridia, Firmicutes, Bacteria

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comp(7950..8270)
DNA (321bp) protein (107aa)
Putative uncharacterized protein n=1 Tax=Lachnospiraceae bacterium 7_1_58FAA RepID=H1CJ63_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:EHO27659.1}; TaxID=658087 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae.;" source="Lachnospiraceae bacterium 7_1_58FAA.;"
hypothetical protein
L3_102_000M1_scaffold_592_5
Oscillibacter sp. 1-3, Oscillibacter, Clostridiales, Clostridia, Firmicutes, Bacteria

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comp(8388..8780)
DNA (393bp) protein (131aa)
Uncharacterized protein n=1 Tax=Oscillibacter sp. 1-3 RepID=R9M2R8_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:EOS64971.1}; TaxID=1235797 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Oscillospiraceae; Oscillibacter.;" source="Oscillibacter sp. 1-3.;"
integrase family protein
L3_102_000M1_scaffold_592_6
Firmicutes bacterium CAG:176, Firmicutes, Bacteria

Not on your lists

9246..9944
DNA (699bp) protein (233aa)
Uncharacterized protein n=1 Tax=Firmicutes bacterium CAG:176 RepID=R6D9F2_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:CDA81629.1}; TaxID=1263007 species="Bacteria; Firmicutes; environmental samples.;" source="Firmicutes bacterium CAG:176.;"
L3_102_000M1_scaffold_592_7
Firmicutes bacterium CAG:176, Firmicutes, Bacteria

Not on your lists

comp(9956..10822)
DNA (867bp) protein (289aa)
Uncharacterized protein n=1 Tax=Firmicutes bacterium CAG:176 RepID=R6CYR8_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:CDA81628.1}; TaxID=1263007 species="Bacteria; Firmicutes; environmental samples.;" source="Firmicutes bacterium CAG:176.;"
EDD domain protein, DegV family
L3_102_000M1_scaffold_592_8
Firmicutes bacterium CAG:176, Firmicutes, Bacteria

Not on your lists

10951..11643
DNA (693bp) protein (231aa)
Response regulator receiver domain protein n=1 Tax=Firmicutes bacterium CAG:176 RepID=R6DUL7_9FIRM
Response regulator receiver domain protein {ECO:0000313|EMBL:CDA81627.1}; TaxID=1263007 species="Bacteria; Firmicutes; environmental samples.;" source="Firmicutes bacterium CAG:176.;"
Response regulators consisting of a CheY-like receiver domain and a winged-helix DNA-binding domain
L3_102_000M1_scaffold_592_9
Firmicutes bacterium CAG:176, Firmicutes, Bacteria

Not on your lists

11630..12685
DNA (1056bp) protein (352aa)
Histidine kinase {ECO:0000256|SAAS:SAAS00251121}; EC=2.7.13.3 {ECO:0000256|SAAS:SAAS00251121};; TaxID=1263007 species="Bacteria; Firmicutes; environmental samples.;" source="Firmicutes bacterium CAG:176.;"
ATPase/histidine kinase/DNA gyrase B/HSP90 domain protein n=1 Tax=Firmicutes bacterium CAG:176 RepID=R6DBS5_9FIRM
histidine kinase
L3_102_000M1_scaffold_592_10
Firmicutes bacterium CAG:176, Firmicutes, Bacteria

Not on your lists

comp(12977..14368)
DNA (1392bp) protein (464aa)
Uncharacterized protein n=1 Tax=Firmicutes bacterium CAG:176 RepID=R6D1H1_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:CDA81625.1}; TaxID=1263007 species="Bacteria; Firmicutes; environmental samples.;" source="Firmicutes bacterium CAG:176.;"
amino acid carrier protein
L3_102_000M1_scaffold_592_11
Firmicutes bacterium CAG:176, Firmicutes, Bacteria

Not on your lists

comp(14493..16154)
DNA (1662bp) protein (554aa)
Uncharacterized protein n=1 Tax=Firmicutes bacterium CAG:176 RepID=R6D9E7_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:CDA81624.1}; TaxID=1263007 species="Bacteria; Firmicutes; environmental samples.;" source="Firmicutes bacterium CAG:176.;"
peptidase M20
L3_102_000M1_scaffold_592_12
Firmicutes bacterium CAG:176, Firmicutes, Bacteria

Not on your lists

comp(16184..17830)
DNA (1647bp) protein (549aa)
Uncharacterized protein n=1 Tax=Firmicutes bacterium CAG:176 RepID=R6CYR4_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:CDA81623.1}; TaxID=1263007 species="Bacteria; Firmicutes; environmental samples.;" source="Firmicutes bacterium CAG:176.;"
exoenzyme regulatory protein aepA
L3_102_000M1_scaffold_592_13
Firmicutes bacterium CAG:176, Firmicutes, Bacteria

Not on your lists

18084..18803
DNA (720bp) protein (240aa)
Helix-turn-helix domain-containing protein n=1 Tax=Firmicutes bacterium CAG:176 RepID=R6DUL4_9FIRM
Helix-turn-helix domain-containing protein {ECO:0000313|EMBL:CDA81622.1}; TaxID=1263007 species="Bacteria; Firmicutes; environmental samples.;" source="Firmicutes bacterium CAG:176.;"
helix-turn-helix domain-containing protein
L3_102_000M1_scaffold_592_14
Firmicutes bacterium CAG:555, Firmicutes, Bacteria

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19006..19524
DNA (519bp) protein (173aa)
Sigma-70 region 2 n=1 Tax=Firmicutes bacterium CAG:555 RepID=R5D2B7_9FIRM
Sigma-70 region 2 {ECO:0000313|EMBL:CCX71002.1}; TaxID=1263030 species="Bacteria; Firmicutes; environmental samples.;" source="Firmicutes bacterium CAG:555.;"
ECF family RNA polymerase sigma-24 subunit
L3_102_000M1_scaffold_592_15
unknown

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19521..20366
DNA (846bp) protein (282aa)

This feature has no annotations

L3_102_000M1_scaffold_592_16
Firmicutes bacterium CAG:176, Firmicutes, Bacteria

Not on your lists

20371..20787
DNA (417bp) protein (139aa)
Uncharacterized protein n=1 Tax=Firmicutes bacterium CAG:176 RepID=R6DAW1_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:CDA82104.1}; TaxID=1263007 species="Bacteria; Firmicutes; environmental samples.;" source="Firmicutes bacterium CAG:176.;"
L3_102_000M1_scaffold_592_17
Firmicutes bacterium CAG:176, Firmicutes, Bacteria

Not on your lists

comp(20839..22434)
DNA (1596bp) protein (532aa)
CTP synthase {ECO:0000256|HAMAP-Rule:MF_01227, ECO:0000256|SAAS:SAAS00037303}; EC=6.3.4.2 {ECO:0000256|HAMAP-Rule:MF_01227, ECO:0000256|SAAS:SAAS00037401};; CTP synthetase {ECO:0000256|HAMAP-Rule:MF_01227}; UTP--ammonia ligase {ECO:0000256|HAMAP-Rule:MF_01227}; TaxID=1263007 species="Bacteria; Firmicutes; environmental samples.;" source="Firmicutes bacterium CAG:176.;"
pyrG; CTP synthase (EC:6.3.4.2)
CTP synthase n=1 Tax=Firmicutes bacterium CAG:176 RepID=R6D2R6_9FIRM
L3_102_000M1_scaffold_592_18
Firmicutes bacterium CAG:176, Firmicutes, Bacteria

Not on your lists

comp(22688..23947)
DNA (1260bp) protein (420aa)
Hemolysins and related proteins containing CBS domains n=1 Tax=Firmicutes bacterium CAG:176 RepID=R6DD45_9FIRM
Hemolysins and related proteins containing CBS domains {ECO:0000313|EMBL:CDA82106.1}; TaxID=1263007 species="Bacteria; Firmicutes; environmental samples.;" source="Firmicutes bacterium CAG:176.;"
Hemolysins and related proteins containing CBS domains
L3_102_000M1_scaffold_592_19
unknown

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comp(23996..24214)
DNA (219bp) protein (73aa)

This feature has no annotations

L3_102_000M1_scaffold_592_20
Firmicutes bacterium CAG:176, Firmicutes, Bacteria

Not on your lists

comp(24254..25123)
DNA (870bp) protein (290aa)
Uncharacterized protein n=1 Tax=Firmicutes bacterium CAG:176 RepID=R6DVX5_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:CDA82107.1}; TaxID=1263007 species="Bacteria; Firmicutes; environmental samples.;" source="Firmicutes bacterium CAG:176.;"
hypothetical protein
L3_102_000M1_scaffold_592_21
Firmicutes bacterium CAG:83, Firmicutes, Bacteria

Not on your lists

25234..25848
DNA (615bp) protein (205aa)
Single-strand binding family protein n=1 Tax=Firmicutes bacterium CAG:83 RepID=R5CYW4_9FIRM
Single-strand binding family protein {ECO:0000313|EMBL:CCX73063.1}; TaxID=1262992 species="Bacteria; Firmicutes; environmental samples.;" source="Firmicutes bacterium CAG:83.;"
ssb; putative single-stranded DNA-binding protein
L3_102_000M1_scaffold_592_22
Firmicutes bacterium CAG:176, Firmicutes, Bacteria

Not on your lists

25981..27384
DNA (1404bp) protein (468aa)
Putative efflux protein MATE family n=1 Tax=Firmicutes bacterium CAG:176 RepID=R6DAW5_9FIRM
Putative efflux protein MATE family {ECO:0000313|EMBL:CDA82109.1}; TaxID=1263007 species="Bacteria; Firmicutes; environmental samples.;" source="Firmicutes bacterium CAG:176.;"
efflux protein
L3_102_000M1_scaffold_592_23
Firmicutes bacterium CAG:176, Firmicutes, Bacteria

Not on your lists

27384..27554
DNA (171bp) protein (57aa)
Uncharacterized protein n=1 Tax=Firmicutes bacterium CAG:176 RepID=R6D2S1_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:CDA82110.1}; TaxID=1263007 species="Bacteria; Firmicutes; environmental samples.;" source="Firmicutes bacterium CAG:176.;"
hypothetical protein
L3_102_000M1_scaffold_592_24
unknown

Not on your lists

comp(27817..28254)
DNA (438bp) protein (146aa)

This feature has no annotations

L3_102_000M1_scaffold_592_25
Firmicutes bacterium CAG:176, Firmicutes, Bacteria

Not on your lists

28670..29308
DNA (639bp) protein (213aa)
LexA repressor {ECO:0000256|HAMAP-Rule:MF_00015, ECO:0000256|SAAS:SAAS00008101}; EC=3.4.21.88 {ECO:0000256|HAMAP-Rule:MF_00015, ECO:0000256|SAAS:SAAS00008054};; TaxID=1263007 species="Bacteria; Firmicutes; environmental samples.;" source="Firmicutes bacterium CAG:176.;"
lexA; LexA repressor (EC:3.4.21.88)
LexA repressor n=1 Tax=Firmicutes bacterium CAG:176 RepID=R6DD49_9FIRM
L3_102_000M1_scaffold_592_26
Firmicutes bacterium CAG:176, Firmicutes, Bacteria

Not on your lists

29535..31418
DNA (1884bp) protein (628aa)
Uncharacterized protein n=1 Tax=Firmicutes bacterium CAG:176 RepID=R6DVX8_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:CDA82112.1}; TaxID=1263007 species="Bacteria; Firmicutes; environmental samples.;" source="Firmicutes bacterium CAG:176.;"
L3_102_000M1_scaffold_592_27
Firmicutes bacterium CAG:176, Firmicutes, Bacteria

Not on your lists

comp(31518..33296)
DNA (1779bp) protein (593aa)
Uncharacterized protein n=1 Tax=Firmicutes bacterium CAG:176 RepID=R6D0C2_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:CDA82113.1}; TaxID=1263007 species="Bacteria; Firmicutes; environmental samples.;" source="Firmicutes bacterium CAG:176.;"
myosin-crossreactive antigen
L3_102_000M1_scaffold_592_28
Firmicutes bacterium CAG:176, Firmicutes, Bacteria

Not on your lists

comp(33437..34018)
DNA (582bp) protein (194aa)
Transcriptional regulator n=1 Tax=Firmicutes bacterium CAG:176 RepID=R6DAW8_9FIRM
Transcriptional regulator {ECO:0000313|EMBL:CDA82114.1}; TaxID=1263007 species="Bacteria; Firmicutes; environmental samples.;" source="Firmicutes bacterium CAG:176.;"
TetR family transcriptional regulator
L3_102_000M1_scaffold_592_29
Oscillibacter sp. CAG:241, Oscillibacter, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(34033..35571)
DNA (1539bp) protein (513aa)
Putative ABC transporter substrate-binding protein n=1 Tax=Oscillibacter sp. CAG:241 RepID=R6GKR5_9FIRM
Putative ABC transporter substrate-binding protein {ECO:0000313|EMBL:CDB25020.1}; TaxID=1262911 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Oscillospiraceae; Oscillibacter; environmental samples.;" source="Oscillibacter sp. CAG:241.;"
putative ABC transporter substrate-binding protein
L3_102_000M1_scaffold_592_30
Firmicutes bacterium CAG:176, Firmicutes, Bacteria

Not on your lists

comp(35568..36380)
DNA (813bp) protein (271aa)
Uncharacterized protein n=1 Tax=Firmicutes bacterium CAG:176 RepID=R6DD53_9FIRM
Laccase domain protein {ECO:0000256|RuleBase:RU361274}; TaxID=1263007 species="Bacteria; Firmicutes; environmental samples.;" source="Firmicutes bacterium CAG:176.;"
hypothetical protein
Displaying items 1-30 of 36 in total

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