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L3_102_034G1_scaffold_93

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Displaying items 1-30 of 113 in total
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
L3_102_034G1_scaffold_93_1
Lactobacillus rhamnosus, Lactobacillus, Lactobacillales, Bacilli, Firmicutes, Bacteria

Not on your lists

comp(100..516)
DNA (417bp) protein (139aa)
Transposase, IS891 family protein n=6 Tax=Lactobacillus rhamnosus RepID=C7TLL6_LACRL
is6; transposase, IS891 family protein
Mobile element protein {ECO:0000313|EMBL:AGP74948.1}; TaxID=1318634 species="Bacteria; Firmicutes; Bacilli; Lactobacillales; Lactobacillaceae; Lactobacillus.;" source="Lactobacillus rhamnosus LOCK908.;"
L3_102_034G1_scaffold_93_2
Lactobacillus rhamnosus, Lactobacillus, Lactobacillales, Bacilli, Firmicutes, Bacteria

Not on your lists

1500..4109
DNA (2610bp) protein (870aa)
Lysyl-tRNA synthetase n=5 Tax=Lactobacillus rhamnosus RepID=S5A857_LACRH
Lysyl-tRNA synthetase (Class II) {ECO:0000313|EMBL:EKS53467.1}; TaxID=1203258 species="Bacteria; Firmicutes; Bacilli; Lactobacillales; Lactobacillaceae; Lactobacillus.;" source="Lactobacillus rhamnosus LRHMDP2.;"
Lysyl-tRNA synthetase
L3_102_034G1_scaffold_93_3
Lactobacillus rhamnosus, Lactobacillus, Lactobacillales, Bacilli, Firmicutes, Bacteria

Not on your lists

4255..4851
DNA (597bp) protein (199aa)
Methyltransferase domain protein n=3 Tax=Lactobacillus rhamnosus RepID=G7UXS7_LACRH
methyltransferase domain protein
Methyltransferase small domain protein {ECO:0000313|EMBL:EEN79658.1}; TaxID=525361 species="Bacteria; Firmicutes; Bacilli; Lactobacillales; Lactobacillaceae; Lactobacillus.;" source="Lactobacillus rhamnosus LMS2-1.;"
L3_102_034G1_scaffold_93_4
Lactobacillus rhamnosus, Lactobacillus, Lactobacillales, Bacilli, Firmicutes, Bacteria

Not on your lists

4908..5234
DNA (327bp) protein (109aa)
Conserved protein n=7 Tax=Lactobacillus rhamnosus RepID=C7TLL1_LACRL
Hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:KIC98550.1}; TaxID=47715 species="Bacteria; Firmicutes; Bacilli; Lactobacillales; Lactobacillaceae; Lactobacillus.;" source="Lactobacillus rhamnosus.;"
L3_102_034G1_scaffold_93_5
Lactobacillus rhamnosus, Lactobacillus, Lactobacillales, Bacilli, Firmicutes, Bacteria

Not on your lists

5419..5931
DNA (513bp) protein (171aa)
tRNA-specific adenosine deaminase {ECO:0000256|HAMAP-Rule:MF_00972}; EC=3.5.4.33 {ECO:0000256|HAMAP-Rule:MF_00972};; TaxID=525361 species="Bacteria; Firmicutes; Bacilli; Lactobacillales; Lactobacillaceae; Lactobacillus.;" source="Lactobacillus rhamnosus LMS2-1.;"
Nucleoside deaminase n=5 Tax=Lactobacillus rhamnosus RepID=S5ACY9_LACRH
Nucleoside deaminase
L3_102_034G1_scaffold_93_6
Lactobacillus rhamnosus, Lactobacillus, Lactobacillales, Bacilli, Firmicutes, Bacteria

Not on your lists

6179..7876
DNA (1698bp) protein (566aa)
DNA polymerase III gamma and tau subunits n=5 Tax=Lactobacillus rhamnosus RepID=C7TLK9_LACRL
DNA polymerase III subunits gamma and tau {ECO:0000313|EMBL:AGP74941.1}; TaxID=1318634 species="Bacteria; Firmicutes; Bacilli; Lactobacillales; Lactobacillaceae; Lactobacillus.;" source="Lactobacillus rhamnosus LOCK908.;"
dnaX; DNA polymerase III gamma and tau subunits
L3_102_034G1_scaffold_93_7
Lactobacillus rhamnosus, Lactobacillus, Lactobacillales, Bacilli, Firmicutes, Bacteria

Not on your lists

7893..8201
DNA (309bp) protein (103aa)
Nucleoid-associated protein LRH_08558 n=13 Tax=Lactobacillus rhamnosus RepID=B5QQA7_LACRH
hypothetical protein
Nucleoid-associated protein HMPREF0539_2202 {ECO:0000256|HAMAP-Rule:MF_00274}; TaxID=525361 species="Bacteria; Firmicutes; Bacilli; Lactobacillales; Lactobacillaceae; Lactobacillus.;" source="Lactobacillus rhamnosus LMS2-1.;"
L3_102_034G1_scaffold_93_8
Lactobacillus rhamnosus, Lactobacillus, Lactobacillales, Bacilli, Firmicutes, Bacteria

Not on your lists

8329..8928
DNA (600bp) protein (200aa)
Recombination protein RecR n=11 Tax=Lactobacillus rhamnosus RepID=B5QQA8_LACRH
recR; recombination protein RecR
Recombination protein RecR {ECO:0000256|HAMAP-Rule:MF_00017, ECO:0000256|SAAS:SAAS00012243}; TaxID=1318634 species="Bacteria; Firmicutes; Bacilli; Lactobacillales; Lactobacillaceae; Lactobacillus.;" source="Lactobacillus rhamnosus LOCK908.;"
L3_102_034G1_scaffold_93_9
Lactobacillus rhamnosus, Lactobacillus, Lactobacillales, Bacilli, Firmicutes, Bacteria

Not on your lists

8928..9191
DNA (264bp) protein (88aa)
Conserved protein n=13 Tax=Lactobacillus rhamnosus RepID=C7TEW5_LACRG
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:EKS53460.1}; TaxID=1203258 species="Bacteria; Firmicutes; Bacilli; Lactobacillales; Lactobacillaceae; Lactobacillus.;" source="Lactobacillus rhamnosus LRHMDP2.;"
L3_102_034G1_scaffold_93_10
Lactobacillus rhamnosus, Lactobacillus, Lactobacillales, Bacilli, Firmicutes, Bacteria

Not on your lists

9438..10085
DNA (648bp) protein (216aa)
Thymidylate kinase {ECO:0000256|HAMAP-Rule:MF_00165}; EC=2.7.4.9 {ECO:0000256|HAMAP-Rule:MF_00165};; dTMP kinase {ECO:0000256|HAMAP-Rule:MF_00165}; TaxID=47715 species="Bacteria; Firmicutes; Bacilli; Lactobacillales; Lactobacillaceae; Lactobacillus.;" source="Lactobacillus rhamnosus.;"
Thymidylate kinase n=3 Tax=Lactobacillus rhamnosus RepID=G7UXS0_LACRH
tmk; thymidylate kinase
L3_102_034G1_scaffold_93_11
Lactobacillus rhamnosus, Lactobacillus, Lactobacillales, Bacilli, Firmicutes, Bacteria

Not on your lists

10142..10471
DNA (330bp) protein (110aa)
Protein from nitrogen regulatory protein P-II (GLNB) family n=12 Tax=Lactobacillus rhamnosus RepID=S4ZYI9_LACRH
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:KIC98545.1}; TaxID=47715 species="Bacteria; Firmicutes; Bacilli; Lactobacillales; Lactobacillaceae; Lactobacillus.;" source="Lactobacillus rhamnosus.;"
L3_102_034G1_scaffold_93_12
Lactobacillus rhamnosus, Lactobacillus, Lactobacillales, Bacilli, Firmicutes, Bacteria

Not on your lists

10471..11448
DNA (978bp) protein (326aa)
DNA polymerase III, delta' subunit {ECO:0000313|EMBL:EEN79667.1}; EC=2.7.7.7 {ECO:0000313|EMBL:EEN79667.1};; TaxID=525361 species="Bacteria; Firmicutes; Bacilli; Lactobacillales; Lactobacillaceae; Lactobacillus.;" source="Lactobacillus rhamnosus LMS2-1.;"
DNA polymerase III, delta subunit n=6 Tax=Lactobacillus rhamnosus RepID=C7TLK2_LACRL
holB; DNA polymerase III subunit delta
L3_102_034G1_scaffold_93_13
Lactobacillus rhamnosus, Lactobacillus, Lactobacillales, Bacilli, Firmicutes, Bacteria

Not on your lists

11453..11791
DNA (339bp) protein (113aa)
Initiation-control protein YabA n=13 Tax=Lactobacillus rhamnosus RepID=B5QQB3_LACRH
hypothetical protein
Initiation-control protein YabA {ECO:0000256|HAMAP-Rule:MF_01159, ECO:0000256|SAAS:SAAS00063209}; TaxID=47715 species="Bacteria; Firmicutes; Bacilli; Lactobacillales; Lactobacillaceae; Lactobacillus.;" source="Lactobacillus rhamnosus.;"
L3_102_034G1_scaffold_93_14
Lactobacillus rhamnosus, Lactobacillus, Lactobacillales, Bacilli, Firmicutes, Bacteria

Not on your lists

11742..12650
DNA (909bp) protein (303aa)
Ribosomal RNA small subunit methyltransferase I {ECO:0000256|HAMAP-Rule:MF_01877}; EC=2.1.1.198 {ECO:0000256|HAMAP-Rule:MF_01877};; 16S rRNA 2'-O-ribose C1402 methyltransferase {ECO:0000256|HAMAP-Rule:MF_01877}; rRNA (cytidine-2'-O-)-methyltransferase RsmI {ECO:0000256|HAMAP-Rule:MF_01877}; TaxID=525361 species="Bacteria; Firmicutes; Bacilli; Lactobacillales; Lactobacillaceae; Lactobacillus.;" source="Lactobacillus rhamnosus LMS2-1.;"
Ribosomal RNA small subunit methyltransferase I n=1 Tax=Lactobacillus rhamnosus LMS2-1 RepID=C2JZ74_LACRH
yraL; tetrapyrrole methylase
L3_102_034G1_scaffold_93_15
Lactobacillus rhamnosus, Lactobacillus, Lactobacillales, Bacilli, Firmicutes, Bacteria

Not on your lists

12714..13457
DNA (744bp) protein (248aa)
Acyl-ACP thioesterase n=6 Tax=Lactobacillus rhamnosus RepID=C7TLJ9_LACRL
acyl-ACP thioesterase family protein
Acyl-ACP thioesterase {ECO:0000313|EMBL:EEN79670.1}; TaxID=525361 species="Bacteria; Firmicutes; Bacilli; Lactobacillales; Lactobacillaceae; Lactobacillus.;" source="Lactobacillus rhamnosus LMS2-1.;"
L3_102_034G1_scaffold_93_16
Lactobacillus rhamnosus, Lactobacillus, Lactobacillales, Bacilli, Firmicutes, Bacteria

Not on your lists

comp(13546..14520)
DNA (975bp) protein (325aa)
L-asparaginase n=8 Tax=Lactobacillus rhamnosus RepID=C7TLJ8_LACRL
ansA; L-asparaginase/Glu-tRNAGln amidotransferase subunit D
L-asparaginase {ECO:0000313|EMBL:AGP74931.1}; TaxID=1318634 species="Bacteria; Firmicutes; Bacilli; Lactobacillales; Lactobacillaceae; Lactobacillus.;" source="Lactobacillus rhamnosus LOCK908.;"
L3_102_034G1_scaffold_93_17
Lactobacillus rhamnosus, Lactobacillus, Lactobacillales, Bacilli, Firmicutes, Bacteria

Not on your lists

15117..15635
DNA (519bp) protein (173aa)
Folate transporter FolT n=12 Tax=Lactobacillus rhamnosus RepID=G7UXI3_LACRH
hypothetical protein
Substrate-specific component FolT of folate ECF transporter {ECO:0000313|EMBL:AGP74930.1}; TaxID=1318634 species="Bacteria; Firmicutes; Bacilli; Lactobacillales; Lactobacillaceae; Lactobacillus.;" source="Lactobacillus rhamnosus LOCK908.;"
L3_102_034G1_scaffold_93_18
Lactobacillus rhamnosus, Lactobacillus, Lactobacillales, Bacilli, Firmicutes, Bacteria

Not on your lists

16167..16772
DNA (606bp) protein (202aa)
Conserved protein n=8 Tax=Lactobacillus rhamnosus RepID=C7TLJ6_LACRL
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:EKS53450.1}; TaxID=1203258 species="Bacteria; Firmicutes; Bacilli; Lactobacillales; Lactobacillaceae; Lactobacillus.;" source="Lactobacillus rhamnosus LRHMDP2.;"
L3_102_034G1_scaffold_93_19
Lactobacillus rhamnosus, Lactobacillus, Lactobacillales, Bacilli, Firmicutes, Bacteria

Not on your lists

16955..17677
DNA (723bp) protein (241aa)
Glycoprotein endopeptidase n=5 Tax=Lactobacillus rhamnosus RepID=C7TLJ5_LACRL
glycoprotease family protein
Inactive-like protein of metal-dependent protease, putative molecular chaperone {ECO:0000313|EMBL:AGP74927.1}; TaxID=1318634 species="Bacteria; Firmicutes; Bacilli; Lactobacillales; Lactobacillaceae; Lactobacillus.;" source="Lactobacillus rhamnosus LOCK908.;"
L3_102_034G1_scaffold_93_20
Lactobacillus rhamnosus, Lactobacillus, Lactobacillales, Bacilli, Firmicutes, Bacteria

Not on your lists

17661..18194
DNA (534bp) protein (178aa)
Ribosomal-protein-S18p-alanine acetyltransferase {ECO:0000313|EMBL:EKS53448.1}; EC=2.3.1.- {ECO:0000313|EMBL:EKS53448.1};; TaxID=1203258 species="Bacteria; Firmicutes; Bacilli; Lactobacillales; Lactobacillaceae; Lactobacillus.;" source="Lactobacillus rhamnosus LRHMDP2.;"
Acetyltransferase n=11 Tax=Lactobacillus rhamnosus RepID=B5QQC0_LACRH
rimI; ribosomal-protein-alanine acetyltransferase
L3_102_034G1_scaffold_93_21
Lactobacillus rhamnosus, Lactobacillus, Lactobacillales, Bacilli, Firmicutes, Bacteria

Not on your lists


18230..19252
DNA (1023bp) protein (341aa)
tRNA N6-adenosine threonylcarbamoyltransferase {ECO:0000256|HAMAP-Rule:MF_01445, ECO:0000256|SAAS:SAAS00195365}; EC=2.3.1.234 {ECO:0000256|HAMAP-Rule:MF_01445, ECO:0000256|SAAS:SAAS00182339};; N6-L-threonylcarbamoyladenine synthase {ECO:0000256|HAMAP-Rule:MF_01445}; t(6)A37 threonylcarbamoyladenosine biosynthesis protein TsaD {ECO:0000256|HAMAP-Rule:MF_01445}; tRNA threonylcarbamoyladenosine biosynthesis protein TsaD {ECO:0000256|HAMAP-Rule:MF_01445}; TaxID=47715 species="Bacteria; Firmicutes; Bacilli; Lactobacillales; Lactobacillaceae; Lactobacillus.;" source="Lactobacillus rhamnosus.;"
tRNA N6-adenosine threonylcarbamoyltransferase n=11 Tax=Lactobacillus rhamnosus RepID=B5QQC1_LACRH
metallohydrolase, glycoprotease/Kae1 family protein
L3_102_034G1_scaffold_93_22
Lactobacillus rhamnosus, Lactobacillus, Lactobacillales, Bacilli, Firmicutes, Bacteria

Not on your lists

19350..19676
DNA (327bp) protein (109aa)
PTS system, Lactose/Cellobiose specific IIB subunit {ECO:0000313|EMBL:EEN79623.1}; EC=2.7.1.69 {ECO:0000313|EMBL:EEN79623.1};; TaxID=525361 species="Bacteria; Firmicutes; Bacilli; Lactobacillales; Lactobacillaceae; Lactobacillus.;" source="Lactobacillus rhamnosus LMS2-1.;"
PTS system cellobiose-specific IIB component n=9 Tax=Lactobacillus rhamnosus RepID=C7TEV1_LACRG
PTS system cellobiose-specific IIB component
L3_102_034G1_scaffold_93_23
Lactobacillus rhamnosus, Lactobacillus, Lactobacillales, Bacilli, Firmicutes, Bacteria

Not on your lists

comp(19802..21754)
DNA (1953bp) protein (651aa)
ABC transporter, ATPase component n=3 Tax=Lactobacillus rhamnosus RepID=C7TLJ1_LACRL
ccmA; heme ABC transporter ATP-binding protein CcmA
ABC transporter ATP-binding protein {ECO:0000313|EMBL:AGP74923.1}; TaxID=1318634 species="Bacteria; Firmicutes; Bacilli; Lactobacillales; Lactobacillaceae; Lactobacillus.;" source="Lactobacillus rhamnosus LOCK908.;"
L3_102_034G1_scaffold_93_24
Lactobacillus rhamnosus, Lactobacillus, Lactobacillales, Bacilli, Firmicutes, Bacteria

Not on your lists

21973..22626
DNA (654bp) protein (218aa)
Redox-sensing transcriptional repressor Rex n=12 Tax=Lactobacillus rhamnosus RepID=B5QQC4_LACRH
DNA-binding family protein
Redox-sensing transcriptional repressor Rex {ECO:0000256|HAMAP-Rule:MF_01131}; TaxID=1318634 species="Bacteria; Firmicutes; Bacilli; Lactobacillales; Lactobacillaceae; Lactobacillus.;" source="Lactobacillus rhamnosus LOCK908.;"
L3_102_034G1_scaffold_93_25
Lactobacillus rhamnosus, Lactobacillus, Lactobacillales, Bacilli, Firmicutes, Bacteria

Not on your lists

22737..23102
DNA (366bp) protein (122aa)
Predicted transcriptional regulator n=12 Tax=Lactobacillus rhamnosus RepID=B5QQC5_LACRH
putative transcriptional regulator
Transcriptional regulator, GntR family {ECO:0000313|EMBL:EKS53443.1}; TaxID=1203258 species="Bacteria; Firmicutes; Bacilli; Lactobacillales; Lactobacillaceae; Lactobacillus.;" source="Lactobacillus rhamnosus LRHMDP2.;"
L3_102_034G1_scaffold_93_26
Lactobacillus rhamnosus, Lactobacillus, Lactobacillales, Bacilli, Firmicutes, Bacteria

Not on your lists

23099..23986
DNA (888bp) protein (296aa)
ABC transporter ATP-binding protein n=2 Tax=Lactobacillus rhamnosus RepID=K8Q624_LACRH
putative multidrug ABC transporter ATP-binding component
ABC transporter ATP-binding protein {ECO:0000313|EMBL:EKS53442.1}; TaxID=1203258 species="Bacteria; Firmicutes; Bacilli; Lactobacillales; Lactobacillaceae; Lactobacillus.;" source="Lactobacillus rhamnosus LRHMDP2.;"
L3_102_034G1_scaffold_93_27
Lactobacillus rhamnosus, Lactobacillus, Lactobacillales, Bacilli, Firmicutes, Bacteria

Not on your lists

23986..25056
DNA (1071bp) protein (357aa)
Uncharacterized protein n=4 Tax=Lactobacillus rhamnosus RepID=S5A613_LACRH
Hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:EKS53441.1}; TaxID=1203258 species="Bacteria; Firmicutes; Bacilli; Lactobacillales; Lactobacillaceae; Lactobacillus.;" source="Lactobacillus rhamnosus LRHMDP2.;"
L3_102_034G1_scaffold_93_28
Lactobacillus rhamnosus, Lactobacillus, Lactobacillales, Bacilli, Firmicutes, Bacteria

Not on your lists

comp(25208..26266)
DNA (1059bp) protein (353aa)
Transcriptional regulator n=12 Tax=Lactobacillus rhamnosus RepID=B5QQC9_LACRH
transcriptional regulator
Cell envelope-associated transcriptional attenuator LytR-CpsA-Psr {ECO:0000313|EMBL:AGP74918.1}; TaxID=1318634 species="Bacteria; Firmicutes; Bacilli; Lactobacillales; Lactobacillaceae; Lactobacillus.;" source="Lactobacillus rhamnosus LOCK908.;"
L3_102_034G1_scaffold_93_29
Lactobacillus rhamnosus, Lactobacillus, Lactobacillales, Bacilli, Firmicutes, Bacteria

Not on your lists

comp(26345..26989)
DNA (645bp) protein (215aa)
Predicted metal-dependent membrane protease n=7 Tax=Lactobacillus rhamnosus RepID=B5QQD0_LACRH
protease
Protease {ECO:0000313|EMBL:KIC98527.1}; TaxID=47715 species="Bacteria; Firmicutes; Bacilli; Lactobacillales; Lactobacillaceae; Lactobacillus.;" source="Lactobacillus rhamnosus.;"
L3_102_034G1_scaffold_93_30
Lactobacillus rhamnosus, Lactobacillus, Lactobacillales, Bacilli, Firmicutes, Bacteria

Not on your lists

27142..27423
DNA (282bp) protein (94aa)
10 kDa chaperonin n=66 Tax=Lactobacillus RepID=CH10_LACC3
groES; co-chaperonin GroES
10 kDa chaperonin {ECO:0000256|HAMAP-Rule:MF_00580, ECO:0000256|RuleBase:RU000535}; GroES protein {ECO:0000256|HAMAP-Rule:MF_00580}; Protein Cpn10 {ECO:0000256|HAMAP-Rule:MF_00580}; TaxID=47715 species="Bacteria; Firmicutes; Bacilli; Lactobacillales; Lactobacillaceae; Lactobacillus.;" source="Lactobacillus rhamnosus.;"
Displaying items 1-30 of 113 in total

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