ggKbase home page

L3_102_034G1_scaffold_106

Search features with annotation key words

Displaying items 1-30 of 96 in total
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
L3_102_034G1_scaffold_106_1
Bilophila sp. 4_1_30, Bilophila, Desulfovibrionales, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

2..508
DNA (507bp) protein (169aa)
Putative uncharacterized protein n=1 Tax=Bilophila sp. 4_1_30 RepID=G1V192_9DELT
Uncharacterized protein {ECO:0000313|EMBL:EGW46064.1}; TaxID=693988 species="Bacteria; Proteobacteria; Deltaproteobacteria; Desulfovibrionales; Desulfovibrionaceae; Bilophila.;" source="Bilophila sp. 4_1_30.;"
DctP (periplasmic C4-dicarboxylate binding protein)
L3_102_034G1_scaffold_106_2
Bilophila sp. 4_1_30, Bilophila, Desulfovibrionales, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

654..1298
DNA (645bp) protein (215aa)
Uncharacterized protein n=2 Tax=Bilophila RepID=E5Y8Y5_BILWA
Uncharacterized protein {ECO:0000313|EMBL:EGW46065.1}; TaxID=693988 species="Bacteria; Proteobacteria; Deltaproteobacteria; Desulfovibrionales; Desulfovibrionaceae; Bilophila.;" source="Bilophila sp. 4_1_30.;"
DctQ (C4-dicarboxylate permease, small subunit)
L3_102_034G1_scaffold_106_3
Bilophila sp. 4_1_30, Bilophila, Desulfovibrionales, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

1295..2602
DNA (1308bp) protein (436aa)
Putative uncharacterized protein n=1 Tax=Bilophila sp. 4_1_30 RepID=G1V194_9DELT
Uncharacterized protein {ECO:0000313|EMBL:EGW46066.1}; TaxID=693988 species="Bacteria; Proteobacteria; Deltaproteobacteria; Desulfovibrionales; Desulfovibrionaceae; Bilophila.;" source="Bilophila sp. 4_1_30.;"
DctM (C4-dicarboxylate permease, large subunit)
L3_102_034G1_scaffold_106_4
Bilophila wadsworthia, Bilophila, Desulfovibrionales, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

2670..3692
DNA (1023bp) protein (341aa)
DctP family TRAP transporter solute receptor n=1 Tax=Bilophila wadsworthia 3_1_6 RepID=E5Y8Y3_BILWA
DctP family TRAP transporter solute receptor {ECO:0000313|EMBL:EFV43532.1}; TaxID=563192 species="Bacteria; Proteobacteria; Deltaproteobacteria; Desulfovibrionales; Desulfovibrionaceae; Bilophila.;" source="Bilophila wadsworthia 3_1_6.;"
DctP (periplasmic C4-dicarboxylate binding protein)
L3_102_034G1_scaffold_106_5
Bilophila sp. 4_1_30, Bilophila, Desulfovibrionales, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(3786..4760)
DNA (975bp) protein (325aa)
Putative uncharacterized protein n=1 Tax=Bilophila sp. 4_1_30 RepID=G1V197_9DELT
Uncharacterized protein {ECO:0000313|EMBL:EGW46030.1}; TaxID=693988 species="Bacteria; Proteobacteria; Deltaproteobacteria; Desulfovibrionales; Desulfovibrionaceae; Bilophila.;" source="Bilophila sp. 4_1_30.;"
hypothetical protein
L3_102_034G1_scaffold_106_6
Bilophila sp. 4_1_30, Bilophila, Desulfovibrionales, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(4929..5876)
DNA (948bp) protein (316aa)
Putative uncharacterized protein n=1 Tax=Bilophila sp. 4_1_30 RepID=G1V198_9DELT
Uncharacterized protein {ECO:0000313|EMBL:EGW46031.1}; TaxID=693988 species="Bacteria; Proteobacteria; Deltaproteobacteria; Desulfovibrionales; Desulfovibrionaceae; Bilophila.;" source="Bilophila sp. 4_1_30.;"
hypothetical protein
L3_102_034G1_scaffold_106_7
Bilophila sp. 4_1_30, Bilophila, Desulfovibrionales, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

6497..7393
DNA (897bp) protein (299aa)
Putative uncharacterized protein n=1 Tax=Bilophila sp. 4_1_30 RepID=G1V199_9DELT
Uncharacterized protein {ECO:0000313|EMBL:EGW46032.1}; TaxID=693988 species="Bacteria; Proteobacteria; Deltaproteobacteria; Desulfovibrionales; Desulfovibrionaceae; Bilophila.;" source="Bilophila sp. 4_1_30.;"
L3_102_034G1_scaffold_106_8
Desulfovibrio sp. 6_1_46AFAA, Desulfovibrio, Desulfovibrionales, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

7656..8141
DNA (486bp) protein (162aa)
Uncharacterized protein n=1 Tax=Desulfovibrio sp. 3_1_syn3 RepID=D9YAX5_9DELT
Uncharacterized protein {ECO:0000313|EMBL:EGW50453.1}; TaxID=665942 species="Bacteria; Proteobacteria; Deltaproteobacteria; Desulfovibrionales; Desulfovibrionaceae; Desulfovibrio.;" source="Desulfovibrio sp. 6_1_46AFAA.;"
hypothetical protein
L3_102_034G1_scaffold_106_9
Bilophila sp. 4_1_30, Bilophila, Desulfovibrionales, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

8227..8658
DNA (432bp) protein (144aa)
Putative uncharacterized protein n=1 Tax=Bilophila sp. 4_1_30 RepID=G1V1A0_9DELT
Uncharacterized protein {ECO:0000313|EMBL:EGW46033.1}; TaxID=693988 species="Bacteria; Proteobacteria; Deltaproteobacteria; Desulfovibrionales; Desulfovibrionaceae; Bilophila.;" source="Bilophila sp. 4_1_30.;"
ATPase
L3_102_034G1_scaffold_106_10
Bordetella petrii, Bordetella, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

9259..10617
DNA (1359bp) protein (453aa)
ltrA2; hypothetical protein (EC:2.7.7.49)
Mobile mitochondrial group II intron of COX1 which is involved in pre-mRNA splicing and in deletion of introns from mitochondrial DNA {ECO:0000313|EMBL:CAP44634.1}; EC=2.7.7.49 {ECO:0000313|EMBL:CAP44634.1};; TaxID=340100 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Alcaligenaceae; Bordetella.;" source="Bordetella petrii (strain ATCC BAA-461 / DSM 12804 / CCUG 43448).;"
Mobile mitochondrial group II intron of COX1 which is involved in pre-mRNA splicing and in deletion of introns from mitochondrial DNA n=1 Tax=Bordetella petrii (strain ATCC BAA-461 / DSM 12804 / CCUG 43448) RepID=A9IAV6_BORPD
L3_102_034G1_scaffold_106_11
Candidatus Magnetobacterium bavaricum, Candidatus Magnetobacterium, Nitrospirales, Nitrospira, Nitrospirae, Bacteria

Not on your lists

10659..11090
DNA (432bp) protein (144aa)
RNA-directed DNA polymerase (EC:2.7.7.49)
RNA-directed DNA polymerase n=1 Tax=Vibrio vulnificus RepID=UPI00034716E0
RNA-directed DNA polymerase {ECO:0000313|EMBL:KJU83685.1}; TaxID=29290 species="Bacteria; Nitrospirae; Nitrospirales; Nitrospiraceae; Candidatus Magnetobacterium.;" source="Candidatus Magnetobacterium bavaricum.;"
L3_102_034G1_scaffold_106_12
Bilophila wadsworthia, Bilophila, Desulfovibrionales, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

11095..11754
DNA (660bp) protein (220aa)
Cobaltochelatase CobS n=1 Tax=Bilophila wadsworthia 3_1_6 RepID=E5YAM7_BILWA
Cobaltochelatase CobS {ECO:0000313|EMBL:EFV42931.1}; TaxID=563192 species="Bacteria; Proteobacteria; Deltaproteobacteria; Desulfovibrionales; Desulfovibrionaceae; Bilophila.;" source="Bilophila wadsworthia 3_1_6.;"
ATPase
L3_102_034G1_scaffold_106_13
Bilophila sp. 4_1_30, Bilophila, Desulfovibrionales, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

11772..12077
DNA (306bp) protein (102aa)
Putative uncharacterized protein n=1 Tax=Bilophila sp. 4_1_30 RepID=G1V1A2_9DELT
Uncharacterized protein {ECO:0000313|EMBL:EGW46035.1}; TaxID=693988 species="Bacteria; Proteobacteria; Deltaproteobacteria; Desulfovibrionales; Desulfovibrionaceae; Bilophila.;" source="Bilophila sp. 4_1_30.;"
L3_102_034G1_scaffold_106_14
Bilophila sp. 4_1_30, Bilophila, Desulfovibrionales, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

12088..13065
DNA (978bp) protein (326aa)
Putative uncharacterized protein n=1 Tax=Bilophila sp. 4_1_30 RepID=G1V1A3_9DELT
Uncharacterized protein {ECO:0000313|EMBL:EGW46036.1}; TaxID=693988 species="Bacteria; Proteobacteria; Deltaproteobacteria; Desulfovibrionales; Desulfovibrionaceae; Bilophila.;" source="Bilophila sp. 4_1_30.;"
hypothetical protein
L3_102_034G1_scaffold_106_15
Bilophila sp. 4_1_30, Bilophila, Desulfovibrionales, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

13070..14638
DNA (1569bp) protein (523aa)
Putative uncharacterized protein n=1 Tax=Bilophila sp. 4_1_30 RepID=G1V1A4_9DELT
Uncharacterized protein {ECO:0000313|EMBL:EGW46037.1}; TaxID=693988 species="Bacteria; Proteobacteria; Deltaproteobacteria; Desulfovibrionales; Desulfovibrionaceae; Bilophila.;" source="Bilophila sp. 4_1_30.;"
von Willebrand factor, type A
L3_102_034G1_scaffold_106_16
Bilophila sp. 4_1_30, Bilophila, Desulfovibrionales, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(15306..16832)
DNA (1527bp) protein (509aa)
Putative uncharacterized protein n=1 Tax=Bilophila sp. 4_1_30 RepID=G1V1A6_9DELT
Uncharacterized protein {ECO:0000313|EMBL:EGW46039.1}; TaxID=693988 species="Bacteria; Proteobacteria; Deltaproteobacteria; Desulfovibrionales; Desulfovibrionaceae; Bilophila.;" source="Bilophila sp. 4_1_30.;"
hypothetical protein
L3_102_034G1_scaffold_106_17
Bilophila sp. 4_1_30, Bilophila, Desulfovibrionales, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(16857..17210)
DNA (354bp) protein (118aa)
Putative uncharacterized protein n=1 Tax=Bilophila sp. 4_1_30 RepID=G1V1A7_9DELT
Uncharacterized protein {ECO:0000313|EMBL:EGW46040.1}; TaxID=693988 species="Bacteria; Proteobacteria; Deltaproteobacteria; Desulfovibrionales; Desulfovibrionaceae; Bilophila.;" source="Bilophila sp. 4_1_30.;"
L3_102_034G1_scaffold_106_18
Bilophila sp. 4_1_30, Bilophila, Desulfovibrionales, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(17364..18323)
DNA (960bp) protein (320aa)
Putative uncharacterized protein n=1 Tax=Bilophila sp. 4_1_30 RepID=G1V1A8_9DELT
Uncharacterized protein {ECO:0000313|EMBL:EGW46041.1}; TaxID=693988 species="Bacteria; Proteobacteria; Deltaproteobacteria; Desulfovibrionales; Desulfovibrionaceae; Bilophila.;" source="Bilophila sp. 4_1_30.;"
extra-cytoplasmic solute receptor family protein 134
L3_102_034G1_scaffold_106_19
Bilophila sp. 4_1_30, Bilophila, Desulfovibrionales, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(18369..19958)
DNA (1590bp) protein (530aa)
Putative uncharacterized protein n=1 Tax=Bilophila sp. 4_1_30 RepID=G1V1A9_9DELT
Uncharacterized protein {ECO:0000313|EMBL:EGW46042.1}; TaxID=693988 species="Bacteria; Proteobacteria; Deltaproteobacteria; Desulfovibrionales; Desulfovibrionaceae; Bilophila.;" source="Bilophila sp. 4_1_30.;"
hdlA1; heterodisulfide reductase-like protein, iron-sulfur subunit HdlA1
L3_102_034G1_scaffold_106_20
Bilophila sp. 4_1_30, Bilophila, Desulfovibrionales, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(19955..21619)
DNA (1665bp) protein (555aa)
Putative uncharacterized protein n=1 Tax=Bilophila sp. 4_1_30 RepID=G1V1B0_9DELT
Uncharacterized protein {ECO:0000313|EMBL:EGW46043.1}; TaxID=693988 species="Bacteria; Proteobacteria; Deltaproteobacteria; Desulfovibrionales; Desulfovibrionaceae; Bilophila.;" source="Bilophila sp. 4_1_30.;"
succinate dehydrogenase/fumarate reductase flavoprotein subunit
L3_102_034G1_scaffold_106_21
Bilophila sp. 4_1_30, Bilophila, Desulfovibrionales, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(21707..22489)
DNA (783bp) protein (261aa)
Putative uncharacterized protein n=1 Tax=Bilophila sp. 4_1_30 RepID=G1V1B1_9DELT
Uncharacterized protein {ECO:0000313|EMBL:EGW46044.1}; TaxID=693988 species="Bacteria; Proteobacteria; Deltaproteobacteria; Desulfovibrionales; Desulfovibrionaceae; Bilophila.;" source="Bilophila sp. 4_1_30.;"
gntR; transcriptional regulator
L3_102_034G1_scaffold_106_22
unknown

Not on your lists

22605..23075
DNA (471bp) protein (157aa)

This feature has no annotations

L3_102_034G1_scaffold_106_23
Bilophila sp. 4_1_30, Bilophila, Desulfovibrionales, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(22944..23270)
DNA (327bp) protein (109aa)
Putative uncharacterized protein n=1 Tax=Bilophila sp. 4_1_30 RepID=G1V1B2_9DELT
Uncharacterized protein {ECO:0000313|EMBL:EGW46045.1}; TaxID=693988 species="Bacteria; Proteobacteria; Deltaproteobacteria; Desulfovibrionales; Desulfovibrionaceae; Bilophila.;" source="Bilophila sp. 4_1_30.;"
branched-chain amino acid transport
L3_102_034G1_scaffold_106_24
Bilophila sp. 4_1_30, Bilophila, Desulfovibrionales, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(23267..24019)
DNA (753bp) protein (251aa)
Putative uncharacterized protein n=1 Tax=Bilophila sp. 4_1_30 RepID=G1V1B3_9DELT
Uncharacterized protein {ECO:0000313|EMBL:EGW46046.1}; TaxID=693988 species="Bacteria; Proteobacteria; Deltaproteobacteria; Desulfovibrionales; Desulfovibrionaceae; Bilophila.;" source="Bilophila sp. 4_1_30.;"
AzlC family protein
L3_102_034G1_scaffold_106_25
Bilophila sp. 4_1_30, Bilophila, Desulfovibrionales, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(24249..25700)
DNA (1452bp) protein (484aa)
Na+/H+ antiporter NhaC n=1 Tax=Bilophila sp. 4_1_30 RepID=G1V1B4_9DELT
Na+/H+ antiporter NhaC {ECO:0000313|EMBL:EGW46047.1}; TaxID=693988 species="Bacteria; Proteobacteria; Deltaproteobacteria; Desulfovibrionales; Desulfovibrionaceae; Bilophila.;" source="Bilophila sp. 4_1_30.;"
MleN
L3_102_034G1_scaffold_106_26
Bilophila sp. 4_1_30, Bilophila, Desulfovibrionales, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(25740..26939)
DNA (1200bp) protein (400aa)
metC2; cystathionine beta-lyase MetC (EC:4.4.1.8)
Putative uncharacterized protein n=1 Tax=Bilophila sp. 4_1_30 RepID=G1V1B5_9DELT
Uncharacterized protein {ECO:0000313|EMBL:EGW46048.1}; TaxID=693988 species="Bacteria; Proteobacteria; Deltaproteobacteria; Desulfovibrionales; Desulfovibrionaceae; Bilophila.;" source="Bilophila sp. 4_1_30.;"
L3_102_034G1_scaffold_106_27
Bilophila sp. 4_1_30, Bilophila, Desulfovibrionales, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(27308..29341)
DNA (2034bp) protein (678aa)
Putative uncharacterized protein n=1 Tax=Bilophila sp. 4_1_30 RepID=G1V1B6_9DELT
Uncharacterized protein {ECO:0000313|EMBL:EGW46049.1}; TaxID=693988 species="Bacteria; Proteobacteria; Deltaproteobacteria; Desulfovibrionales; Desulfovibrionaceae; Bilophila.;" source="Bilophila sp. 4_1_30.;"
sigma-54 specific transcriptional regulator
L3_102_034G1_scaffold_106_28
unknown

Not on your lists

29585..29683
DNA (99bp) protein (33aa)

This feature has no annotations

L3_102_034G1_scaffold_106_29
Bilophila sp. 4_1_30, Bilophila, Desulfovibrionales, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(29834..32596)
DNA (2763bp) protein (921aa)
Putative uncharacterized protein n=1 Tax=Bilophila sp. 4_1_30 RepID=G1V1B7_9DELT
Uncharacterized protein {ECO:0000313|EMBL:EGW46050.1}; TaxID=693988 species="Bacteria; Proteobacteria; Deltaproteobacteria; Desulfovibrionales; Desulfovibrionaceae; Bilophila.;" source="Bilophila sp. 4_1_30.;"
hypothetical protein
L3_102_034G1_scaffold_106_30
Bilophila sp. 4_1_30, Bilophila, Desulfovibrionales, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(32740..35085)
DNA (2346bp) protein (782aa)
Putative uncharacterized protein n=1 Tax=Bilophila sp. 4_1_30 RepID=G1V1B8_9DELT
Uncharacterized protein {ECO:0000313|EMBL:EGW46051.1}; TaxID=693988 species="Bacteria; Proteobacteria; Deltaproteobacteria; Desulfovibrionales; Desulfovibrionaceae; Bilophila.;" source="Bilophila sp. 4_1_30.;"
hypothetical protein
Displaying items 1-30 of 96 in total

View Taxonomy