ggKbase home page

L3_102_034G1_scaffold_159

Search features with annotation key words

Displaying items 1-30 of 62 in total
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
L3_102_034G1_scaffold_159_1
Bacteroides eggerthii CAG:109, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(193..525)
DNA (333bp) protein (111aa)
Uncharacterized protein n=3 Tax=Bacteroides RepID=D2EVE1_9BACE
Uncharacterized protein {ECO:0000313|EMBL:CCY55648.1}; TaxID=1263043 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides; environmental samples.;" source="Bacteroides eggerthii CAG:109.;"
hypothetical protein
L3_102_034G1_scaffold_159_2
Parabacteroides goldsteinii, Parabacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(679..1320)
DNA (642bp) protein (214aa)
Uncharacterized protein n=3 Tax=Bacteroidales RepID=K5ZUQ3_9PORP
Uncharacterized protein {ECO:0000313|EMBL:EKN19484.1}; TaxID=999418 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Porphyromonadaceae; Parabacteroides.;" source="Parabacteroides goldsteinii CL02T12C30.;"
hypothetical protein
L3_102_034G1_scaffold_159_3
Parabacteroides goldsteinii, Parabacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(1351..1842)
DNA (492bp) protein (164aa)
Uncharacterized protein n=1 Tax=Parabacteroides goldsteinii CL02T12C30 RepID=K6AUN7_9PORP
Uncharacterized protein {ECO:0000313|EMBL:EKN19483.1}; TaxID=999418 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Porphyromonadaceae; Parabacteroides.;" source="Parabacteroides goldsteinii CL02T12C30.;"
hypothetical protein
L3_102_034G1_scaffold_159_4
Bacteroides sp. D20, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

2010..2795
DNA (786bp) protein (262aa)
Transcriptional regulator, LuxR family n=2 Tax=Bacteroides RepID=D2EVD8_9BACE
Transcriptional regulator, LuxR family {ECO:0000313|EMBL:EFA21915.1}; TaxID=585543 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides.;" source="Bacteroides sp. D20.;"
LuxR family transcriptional regulator
L3_102_034G1_scaffold_159_5
Bacteroides sp. D20, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

3112..3426
DNA (315bp) protein (105aa)
Uncharacterized protein n=1 Tax=Bacteroides sp. D20 RepID=D2EVD7_9BACE
Uncharacterized protein {ECO:0000313|EMBL:EFA21914.1}; TaxID=585543 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides.;" source="Bacteroides sp. D20.;"
hypothetical protein
L3_102_034G1_scaffold_159_6
Bacteroides sp. D20, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

3413..3706
DNA (294bp) protein (98aa)
Uncharacterized protein n=1 Tax=Bacteroides sp. D20 RepID=D2EVD6_9BACE
Uncharacterized protein {ECO:0000313|EMBL:EFA21913.1}; TaxID=585543 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides.;" source="Bacteroides sp. D20.;"
hypothetical protein
L3_102_034G1_scaffold_159_7
Parabacteroides goldsteinii, Parabacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

3760..4053
DNA (294bp) protein (98aa)
Uncharacterized protein n=9 Tax=Bacteroidales RepID=A5ZLR9_9BACE
Uncharacterized protein {ECO:0000313|EMBL:EKN19479.1}; TaxID=999418 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Porphyromonadaceae; Parabacteroides.;" source="Parabacteroides goldsteinii CL02T12C30.;"
DNA-binding protein
L3_102_034G1_scaffold_159_8
Bacteroides sp. 2_2_4, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(4338..5558)
DNA (1221bp) protein (407aa)
Site-specific recombinase, phage integrase family n=1 Tax=Bacteroides sp. 2_2_4 RepID=C3R3W8_9BACE
Site-specific recombinase, phage integrase family {ECO:0000313|EMBL:EEO58891.1}; TaxID=469590 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides.;" source="Bacteroides sp. 2_2_4.;"
tyrosine type site-specific recombinase
L3_102_034G1_scaffold_159_9
Parabacteroides distasonis, Parabacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(5944..7101)
DNA (1158bp) protein (386aa)
Uncharacterized protein n=2 Tax=Parabacteroides RepID=E1YNL1_9PORP
Uncharacterized protein {ECO:0000313|EMBL:EKN23136.1}; TaxID=999417 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Porphyromonadaceae; Parabacteroides.;" source="Parabacteroides distasonis CL09T03C24.;"
permease
L3_102_034G1_scaffold_159_10
Parabacteroides sp. 20_3, Parabacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

7160..8617
DNA (1458bp) protein (486aa)
D-alanyl-D-alanine carboxypeptidase/D-alanyl-D-alanine-endopeptidase {ECO:0000313|EMBL:EFK64779.1}; EC=3.4.16.4 {ECO:0000313|EMBL:EFK64779.1};; TaxID=469591 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Porphyromonadaceae; Parabacteroides.;" source="Parabacteroides sp. 20_3.;"
D-alanyl-D-alanine carboxypeptidase/D-alanyl-D-alanine-endopeptidase n=2 Tax=Parabacteroides RepID=E1YNL0_9PORP
D-alanyl-D-alanine carboxypeptidase
L3_102_034G1_scaffold_159_11
Parabacteroides distasonis, Parabacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(8625..9380)
DNA (756bp) protein (252aa)
LytTr DNA-binding domain protein n=2 Tax=Parabacteroides RepID=E1YNK9_9PORP
Uncharacterized protein {ECO:0000313|EMBL:EKN23134.1}; TaxID=999417 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Porphyromonadaceae; Parabacteroides.;" source="Parabacteroides distasonis CL09T03C24.;"
two-component system response regulator
L3_102_034G1_scaffold_159_12
Parabacteroides distasonis, Parabacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(9377..10444)
DNA (1068bp) protein (356aa)
Histidine kinase n=2 Tax=Parabacteroides RepID=E1YNK8_9PORP
Uncharacterized protein {ECO:0000313|EMBL:EKN23133.1}; TaxID=999417 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Porphyromonadaceae; Parabacteroides.;" source="Parabacteroides distasonis CL09T03C24.;"
two-component system sensor histidine kinase
L3_102_034G1_scaffold_159_13
Parabacteroides sp. 20_3, Parabacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(10528..11748)
DNA (1221bp) protein (407aa)
Efflux ABC transporter, permease protein n=2 Tax=Parabacteroides RepID=E1YNK7_9PORP
Efflux ABC transporter, permease protein {ECO:0000313|EMBL:EFK64775.1}; TaxID=469591 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Porphyromonadaceae; Parabacteroides.;" source="Parabacteroides sp. 20_3.;"
ABC transporter permease
L3_102_034G1_scaffold_159_14
Parabacteroides sp. 20_3, Parabacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(11786..12526)
DNA (741bp) protein (247aa)
ABC transporter, ATP-binding protein n=2 Tax=Parabacteroides RepID=E1YNK6_9PORP
ABC transporter, ATP-binding protein {ECO:0000313|EMBL:EFK64774.1}; TaxID=469591 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Porphyromonadaceae; Parabacteroides.;" source="Parabacteroides sp. 20_3.;"
ABC transporter ATP-binding protein
L3_102_034G1_scaffold_159_15
Bacteroides sp. 2_1_33B, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(12535..13761)
DNA (1227bp) protein (409aa)
Efflux transporter, RND family, MFP subunit n=4 Tax=Bacteroidales RepID=D0TE44_9BACE
Efflux transporter, RND family, MFP subunit {ECO:0000313|EMBL:EEY83569.1}; TaxID=469589 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides.;" source="Bacteroides sp. 2_1_33B.;"
efflux system periplasmic protein
L3_102_034G1_scaffold_159_16
Parabacteroides distasonis, Parabacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(13879..15195)
DNA (1317bp) protein (439aa)
Outer membrane efflux protein n=3 Tax=Parabacteroides RepID=C7X4Y3_9PORP
Outer membrane efflux family protein {ECO:0000313|EMBL:KDS66277.1}; TaxID=1339344 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Porphyromonadaceae; Parabacteroides.;" source="Parabacteroides distasonis str. 3999B T(B) 4.;"
outer membrane efflux protein
L3_102_034G1_scaffold_159_17
Parabacteroides sp. D25, Parabacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(15891..16442)
DNA (552bp) protein (184aa)
Chromate transport protein n=4 Tax=Bacteroidales RepID=D0TE46_9BACE
Uncharacterized protein {ECO:0000313|EMBL:EKN31764.1}; TaxID=658661 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Porphyromonadaceae; Parabacteroides.;" source="Parabacteroides sp. D25.;"
chromate transport protein
L3_102_034G1_scaffold_159_18
Parabacteroides sp. D13, Parabacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(16444..16971)
DNA (528bp) protein (176aa)
Chromate transport protein n=9 Tax=Bacteroidales RepID=A6LH90_PARD8
chromate transport protein
Chromate transport protein {ECO:0000313|EMBL:EEU52951.1}; TaxID=563193 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Porphyromonadaceae; Parabacteroides.;" source="Parabacteroides sp. D13.;"
L3_102_034G1_scaffold_159_19
Parabacteroides sp. 20_3, Parabacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(16993..18582)
DNA (1590bp) protein (530aa)
Peptidase, S41 family {ECO:0000313|EMBL:EFK64769.1}; EC=3.4.21.- {ECO:0000313|EMBL:EFK64769.1};; TaxID=469591 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Porphyromonadaceae; Parabacteroides.;" source="Parabacteroides sp. 20_3.;"
Peptidase, S41 family n=2 Tax=Parabacteroides RepID=E1YNK1_9PORP
carboxy-terminal processing protease
L3_102_034G1_scaffold_159_20
Parabacteroides distasonis, Parabacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(18606..19079)
DNA (474bp) protein (158aa)
coaD; phosphopantetheine adenylyltransferase (EC:2.7.7.3)
Phosphopantetheine adenylyltransferase {ECO:0000256|HAMAP-Rule:MF_00151, ECO:0000256|SAAS:SAAS00109024}; EC=2.7.7.3 {ECO:0000256|HAMAP-Rule:MF_00151, ECO:0000256|SAAS:SAAS00109037};; Dephospho-CoA pyrophosphorylase {ECO:0000256|HAMAP-Rule:MF_00151}; Pantetheine-phosphate adenylyltransferase {ECO:0000256|HAMAP-Rule:MF_00151}; TaxID=999417 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Porphyromonadaceae; Parabacteroides.;" source="Parabacteroides distasonis CL09T03C24.;"
Phosphopantetheine adenylyltransferase n=9 Tax=Bacteroidales RepID=A6LH88_PARD8
L3_102_034G1_scaffold_159_21
Parabacteroides sp. 20_3, Parabacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(19066..20931)
DNA (1866bp) protein (622aa)
ATPase/histidine kinase/DNA gyrase B/HSP90 domain protein n=4 Tax=Parabacteroides RepID=E1YNJ9_9PORP
DNA topoisomerase IV subunit B
ATPase/histidine kinase/DNA gyrase B/HSP90 domain protein {ECO:0000313|EMBL:EFK64767.1}; TaxID=469591 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Porphyromonadaceae; Parabacteroides.;" source="Parabacteroides sp. 20_3.;"
L3_102_034G1_scaffold_159_22
Parabacteroides distasonis, Parabacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(20937..22064)
DNA (1128bp) protein (376aa)
Uncharacterized protein n=8 Tax=Bacteroidales RepID=A6LH86_PARD8
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:KDS66299.1}; TaxID=1339344 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Porphyromonadaceae; Parabacteroides.;" source="Parabacteroides distasonis str. 3999B T(B) 4.;"
L3_102_034G1_scaffold_159_23
Parabacteroides sp. 20_3, Parabacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

22203..23111
DNA (909bp) protein (303aa)
SMP-30/Gluconolaconase/LRE-like region n=2 Tax=Parabacteroides RepID=E1YNJ7_9PORP
SMP-30/Gluconolaconase/LRE-like region {ECO:0000313|EMBL:EFK64765.1}; TaxID=469591 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Porphyromonadaceae; Parabacteroides.;" source="Parabacteroides sp. 20_3.;"
regucalcin-like protein
L3_102_034G1_scaffold_159_24
Parabacteroides distasonis, Parabacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

23250..25436
DNA (2187bp) protein (729aa)
Ribonuclease R {ECO:0000256|HAMAP-Rule:MF_01895}; Short=RNase R {ECO:0000256|HAMAP-Rule:MF_01895};; EC=3.1.13.1 {ECO:0000256|HAMAP-Rule:MF_01895};; TaxID=999417 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Porphyromonadaceae; Parabacteroides.;" source="Parabacteroides distasonis CL09T03C24.;"
Ribonuclease R n=2 Tax=Parabacteroides RepID=E1YNJ6_9PORP
ribonuclease R
L3_102_034G1_scaffold_159_25
Parabacteroides sp. D13, Parabacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(25540..25752)
DNA (213bp) protein (71aa)
Uncharacterized protein n=8 Tax=Bacteroidales RepID=C7X4X4_9PORP
Uncharacterized protein {ECO:0000313|EMBL:EEU52944.1}; TaxID=563193 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Porphyromonadaceae; Parabacteroides.;" source="Parabacteroides sp. D13.;"
hypothetical protein
L3_102_034G1_scaffold_159_26
Parabacteroides sp. 20_3, Parabacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(25757..26176)
DNA (420bp) protein (140aa)
ATPase n=3 Tax=Bacteroidales RepID=D7ILS8_9BACE
Hydrolase, P-loop family {ECO:0000313|EMBL:EFK64762.1}; TaxID=469591 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Porphyromonadaceae; Parabacteroides.;" source="Parabacteroides sp. 20_3.;"
ATPase/GTPase
L3_102_034G1_scaffold_159_27
Parabacteroides sp. 20_3, Parabacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(26187..26525)
DNA (339bp) protein (113aa)
Uncharacterized protein n=2 Tax=Parabacteroides RepID=K6B4Z1_9PORP
Putative toxin-antitoxin system, antitoxin component {ECO:0000313|EMBL:EFK64761.1}; TaxID=469591 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Porphyromonadaceae; Parabacteroides.;" source="Parabacteroides sp. 20_3.;"
hypothetical protein
L3_102_034G1_scaffold_159_28
Parabacteroides sp. 20_3, Parabacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(26494..26829)
DNA (336bp) protein (112aa)
Nucleotidyltransferase domain protein n=2 Tax=Parabacteroides RepID=E1YNJ2_9PORP
Nucleotidyltransferase domain protein {ECO:0000313|EMBL:EFK64760.1}; TaxID=469591 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Porphyromonadaceae; Parabacteroides.;" source="Parabacteroides sp. 20_3.;"
hypothetical protein
L3_102_034G1_scaffold_159_29
Parabacteroides distasonis, Parabacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(26887..28437)
DNA (1551bp) protein (517aa)
Response regulator n=4 Tax=Bacteroidales RepID=D7ILS7_9BACE
Uncharacterized protein {ECO:0000313|EMBL:EKN23116.1}; TaxID=999417 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Porphyromonadaceae; Parabacteroides.;" source="Parabacteroides distasonis CL09T03C24.;"
two-component system response regulator
L3_102_034G1_scaffold_159_30
Parabacteroides sp. D25, Parabacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

29301..29846
DNA (546bp) protein (182aa)
RNA polymerase sigma-70 factor n=4 Tax=Bacteroidales RepID=C7X3X0_9PORP
RNA polymerase sigma-70 factor, expansion family 1 {ECO:0000313|EMBL:EKN31753.1}; TaxID=658661 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Porphyromonadaceae; Parabacteroides.;" source="Parabacteroides sp. D25.;"
ECF-type RNA polymerase sigma factor
Displaying items 1-30 of 62 in total

View Taxonomy