ggKbase home page

L3_102_034G1_scaffold_165

Search features with annotation key words

Displaying items 1-30 of 70 in total
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
L3_102_034G1_scaffold_165_1
[Clostridium] clostridioforme, Lachnoclostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(83..676)
DNA (594bp) protein (198aa)
Pilus assembly protein CpaF n=1 Tax=Clostridium clostridioforme 90A8 RepID=N9X9Z0_9CLOT
Pilus assembly protein CpaF {ECO:0000313|EMBL:ENZ12126.1}; TaxID=999408 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae.;" source="[Clostridium] clostridioforme 90A8.;"
type II secretion system protein E
L3_102_034G1_scaffold_165_2
[Clostridium] clostridioforme, Lachnoclostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(670..1482)
DNA (813bp) protein (271aa)
Uncharacterized protein n=1 Tax=Clostridium clostridioforme 90A8 RepID=N9YWI3_9CLOT
Uncharacterized protein {ECO:0000313|EMBL:ENZ12127.1}; TaxID=999408 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae.;" source="[Clostridium] clostridioforme 90A8.;"
hypothetical protein
L3_102_034G1_scaffold_165_3
[Clostridium] clostridioforme, Lachnoclostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(1486..2346)
DNA (861bp) protein (287aa)
Flp pilus assembly protein CpaB n=1 Tax=Clostridium clostridioforme 90A8 RepID=N9YJQ0_9CLOT
Flp pilus assembly protein CpaB {ECO:0000313|EMBL:ENZ12128.1}; TaxID=999408 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae.;" source="[Clostridium] clostridioforme 90A8.;"
pilus assembly protein CpaB
L3_102_034G1_scaffold_165_4
[Clostridium] clostridioforme, Lachnoclostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(2496..2972)
DNA (477bp) protein (159aa)
Uncharacterized protein n=1 Tax=Clostridium clostridioforme 90A8 RepID=N9YV63_9CLOT
Uncharacterized protein {ECO:0000313|EMBL:ENZ12129.1}; TaxID=999408 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae.;" source="[Clostridium] clostridioforme 90A8.;"
peptidase A24A prepilin type IV
L3_102_034G1_scaffold_165_5
[Clostridium] clostridioforme, Lachnoclostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(2956..3195)
DNA (240bp) protein (80aa)
Uncharacterized protein n=2 Tax=Clostridium RepID=A7VE98_9CLOT
Uncharacterized protein {ECO:0000313|EMBL:ENZ12130.1}; TaxID=999408 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae.;" source="[Clostridium] clostridioforme 90A8.;"
hypothetical protein
L3_102_034G1_scaffold_165_6
[Clostridium] clostridioforme, Lachnoclostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(3244..3570)
DNA (327bp) protein (109aa)
Stage V sporulation protein G n=2 Tax=Clostridium RepID=N9X9Z5_9CLOT
Stage V sporulation protein G {ECO:0000313|EMBL:ENZ12131.1}; TaxID=999408 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae.;" source="[Clostridium] clostridioforme 90A8.;"
SpoVG family protein
L3_102_034G1_scaffold_165_7
[Clostridium] clostridioforme, Lachnoclostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(3658..4218)
DNA (561bp) protein (187aa)
Uncharacterized protein n=1 Tax=Clostridium clostridioforme 90A8 RepID=N9YWJ2_9CLOT
Uncharacterized protein {ECO:0000313|EMBL:ENZ12132.1}; TaxID=999408 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae.;" source="[Clostridium] clostridioforme 90A8.;"
hypothetical protein
L3_102_034G1_scaffold_165_8
[Clostridium] clostridioforme, Lachnoclostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(4235..4795)
DNA (561bp) protein (187aa)
Uncharacterized protein n=1 Tax=Clostridium clostridioforme 90A8 RepID=N9YJQ8_9CLOT
Uncharacterized protein {ECO:0000313|EMBL:ENZ12133.1}; TaxID=999408 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae.;" source="[Clostridium] clostridioforme 90A8.;"
hypothetical protein
L3_102_034G1_scaffold_165_9
[Clostridium] clostridioforme, Lachnoclostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(4800..5078)
DNA (279bp) protein (93aa)
Uncharacterized protein n=2 Tax=Clostridium RepID=A7VEA2_9CLOT
AbrB family transcriptional regulator {ECO:0000313|EMBL:ENZ12134.1}; TaxID=999408 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae.;" source="[Clostridium] clostridioforme 90A8.;"
stage V sporulation protein T, putative
L3_102_034G1_scaffold_165_10
Clostridium sp. L2-50, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(5075..5335)
DNA (261bp) protein (87aa)
Uncharacterized protein n=1 Tax=Clostridium sp. L2-50 RepID=A7VEA3_9CLOT
Uncharacterized protein {ECO:0000313|EMBL:EDO58106.1}; TaxID=411489 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium sp. L2-50.;"
L3_102_034G1_scaffold_165_11
[Clostridium] clostridioforme, Lachnoclostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(5332..6252)
DNA (921bp) protein (307aa)
DNA adenine methylase n=1 Tax=Clostridium clostridioforme 90A8 RepID=N9XA01_9CLOT
DNA adenine methylase {ECO:0000313|EMBL:ENZ12136.1}; TaxID=999408 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae.;" source="[Clostridium] clostridioforme 90A8.;"
DNA adenine methylase
L3_102_034G1_scaffold_165_12
[Clostridium] clostridioforme, Lachnoclostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(6363..7355)
DNA (993bp) protein (331aa)
Uncharacterized protein n=1 Tax=Clostridium clostridioforme 90A8 RepID=N9YWJ7_9CLOT
Uncharacterized protein {ECO:0000313|EMBL:ENZ12137.1}; TaxID=999408 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae.;" source="[Clostridium] clostridioforme 90A8.;"
hypothetical protein
L3_102_034G1_scaffold_165_13
[Clostridium] clostridioforme, Lachnoclostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(7493..8056)
DNA (564bp) protein (188aa)
Uncharacterized protein n=1 Tax=Clostridium clostridioforme 90A8 RepID=N9YJR3_9CLOT
Uncharacterized protein {ECO:0000313|EMBL:ENZ12138.1}; TaxID=999408 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae.;" source="[Clostridium] clostridioforme 90A8.;"
hypothetical protein
L3_102_034G1_scaffold_165_14
Clostridium sp. L2-50, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(8031..8681)
DNA (651bp) protein (217aa)
Uncharacterized protein n=1 Tax=Clostridium sp. L2-50 RepID=A7VEA9_9CLOT
Uncharacterized protein {ECO:0000313|EMBL:EDO58112.1}; TaxID=411489 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium sp. L2-50.;"
hypothetical protein
L3_102_034G1_scaffold_165_15
Holdemanella biformis, Holdemanella, Erysipelotrichales, Erysipelotrichia, Firmicutes, Bacteria

Not on your lists

comp(8838..10334)
DNA (1497bp) protein (499aa)
Uncharacterized protein n=1 Tax=Eubacterium biforme DSM 3989 RepID=B7C7E8_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:EEC91305.1}; TaxID=518637 species="Bacteria; Firmicutes; Erysipelotrichia; Erysipelotrichales; Erysipelotrichaceae; Holdemanella.;" source="Holdemanella biformis DSM 3989.;"
hypothetical protein
L3_102_034G1_scaffold_165_16
Holdemanella biformis, Holdemanella, Erysipelotrichales, Erysipelotrichia, Firmicutes, Bacteria

Not on your lists

comp(10353..11387)
DNA (1035bp) protein (345aa)
Uncharacterized protein n=1 Tax=Eubacterium biforme DSM 3989 RepID=B7C7E9_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:EEC91306.1}; TaxID=518637 species="Bacteria; Firmicutes; Erysipelotrichia; Erysipelotrichales; Erysipelotrichaceae; Holdemanella.;" source="Holdemanella biformis DSM 3989.;"
hypothetical protein
L3_102_034G1_scaffold_165_17
[Clostridium] clostridioforme, Lachnoclostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(11486..11788)
DNA (303bp) protein (101aa)
Uncharacterized protein n=1 Tax=Clostridium clostridioforme 90A8 RepID=N9XA07_9CLOT
Uncharacterized protein {ECO:0000313|EMBL:ENZ12141.1}; TaxID=999408 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae.;" source="[Clostridium] clostridioforme 90A8.;"
hypothetical protein
L3_102_034G1_scaffold_165_18
Hungatella hathewayi, Hungatella, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(11861..11962)
DNA (102bp) protein (34aa)
Uncharacterized protein n=1 Tax=Clostridium hathewayi 12489931 RepID=N9VH18_9CLOT
Uncharacterized protein {ECO:0000313|EMBL:ENY89960.1}; TaxID=999412 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Hungatella.;" source="Hungatella hathewayi 12489931.;"
L3_102_034G1_scaffold_165_19
Hungatella hathewayi, Hungatella, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(11980..13215)
DNA (1236bp) protein (412aa)
Uncharacterized protein n=1 Tax=Clostridium hathewayi 12489931 RepID=N9X2M4_9CLOT
Uncharacterized protein {ECO:0000313|EMBL:ENY89961.1}; TaxID=999412 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Hungatella.;" source="Hungatella hathewayi 12489931.;"
hypothetical protein
L3_102_034G1_scaffold_165_20
Hungatella hathewayi, Hungatella, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(13218..13955)
DNA (738bp) protein (246aa)
Uncharacterized protein n=1 Tax=Clostridium hathewayi 12489931 RepID=N9WR00_9CLOT
Uncharacterized protein {ECO:0000313|EMBL:ENY89962.1}; TaxID=999412 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Hungatella.;" source="Hungatella hathewayi 12489931.;"
type II secretion system F domain-containing protein
L3_102_034G1_scaffold_165_21
Hungatella hathewayi, Hungatella, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(13945..15129)
DNA (1185bp) protein (395aa)
Type II secretion system protein n=1 Tax=Clostridium hathewayi 12489931 RepID=N9X227_9CLOT
Type II secretion system protein {ECO:0000313|EMBL:ENY89963.1}; TaxID=999412 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Hungatella.;" source="Hungatella hathewayi 12489931.;"
type II secretion system protein E
L3_102_034G1_scaffold_165_22
unknown

Not on your lists

comp(15141..15284)
DNA (144bp) protein (48aa)

This feature has no annotations

L3_102_034G1_scaffold_165_23
Hungatella hathewayi, Hungatella, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(15236..16234)
DNA (999bp) protein (333aa)
Uncharacterized protein n=1 Tax=Clostridium hathewayi 12489931 RepID=N9VHR2_9CLOT
Uncharacterized protein {ECO:0000313|EMBL:ENY89964.1}; TaxID=999412 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Hungatella.;" source="Hungatella hathewayi 12489931.;"
hypothetical protein
L3_102_034G1_scaffold_165_24
Hungatella hathewayi, Hungatella, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(16245..16754)
DNA (510bp) protein (170aa)
Uncharacterized protein n=1 Tax=Clostridium hathewayi 12489931 RepID=N9VH20_9CLOT
Uncharacterized protein {ECO:0000313|EMBL:ENY89965.1}; TaxID=999412 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Hungatella.;" source="Hungatella hathewayi 12489931.;"
peptidase A24A prepilin type IV
L3_102_034G1_scaffold_165_25
Hungatella hathewayi, Hungatella, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

17127..17543
DNA (417bp) protein (139aa)
ArsR family transcriptional regulator n=1 Tax=Clostridium hathewayi 12489931 RepID=N9X2M9_9CLOT
ArsR family transcriptional regulator {ECO:0000313|EMBL:ENY89966.1}; TaxID=999412 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Hungatella.;" source="Hungatella hathewayi 12489931.;"
ArsR family transcriptional regulator
L3_102_034G1_scaffold_165_26
Hungatella hathewayi, Hungatella, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

17620..17838
DNA (219bp) protein (73aa)
Uncharacterized protein n=1 Tax=Clostridium hathewayi 12489931 RepID=N9WR06_9CLOT
Uncharacterized protein {ECO:0000313|EMBL:ENY89967.1}; TaxID=999412 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Hungatella.;" source="Hungatella hathewayi 12489931.;"
hypothetical protein
L3_102_034G1_scaffold_165_27
Hungatella hathewayi, Hungatella, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

17864..19198
DNA (1335bp) protein (445aa)
Alpha amylase n=1 Tax=Clostridium hathewayi 12489931 RepID=N9X229_9CLOT
Alpha amylase {ECO:0000313|EMBL:ENY89968.1}; TaxID=999412 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Hungatella.;" source="Hungatella hathewayi 12489931.;"
alpha amylase
L3_102_034G1_scaffold_165_28
Hungatella hathewayi, Hungatella, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

19203..21113
DNA (1911bp) protein (637aa)
1,4-alpha-glucan branching enzyme GlgB {ECO:0000256|HAMAP-Rule:MF_00685}; EC=2.4.1.18 {ECO:0000256|HAMAP-Rule:MF_00685};; 1,4-alpha-D-glucan:1,4-alpha-D-glucan 6-glucosyl-transferase {ECO:0000256|HAMAP-Rule:MF_00685}; Alpha-(1->4)-glucan branching enzyme {ECO:0000256|HAMAP-Rule:MF_00685}; Glycogen branching enzyme {ECO:0000256|HAMAP-Rule:MF_00685}; TaxID=999412 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Hungatella.;" source="Hungatella hathewayi 12489931.;"
1,4-alpha-glucan branching enzyme GlgB n=1 Tax=Clostridium hathewayi 12489931 RepID=N9VHR6_9CLOT
1,4-alpha-glucan-branching protein
L3_102_034G1_scaffold_165_29
Hungatella hathewayi, Hungatella, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

21260..22009
DNA (750bp) protein (250aa)
Aminoglycoside phosphotransferase n=1 Tax=Clostridium hathewayi 12489931 RepID=N9VH24_9CLOT
Aminoglycoside phosphotransferase {ECO:0000313|EMBL:ENY89970.1}; TaxID=999412 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Hungatella.;" source="Hungatella hathewayi 12489931.;"
aminoglycoside phosphotransferase
L3_102_034G1_scaffold_165_30
Hungatella hathewayi, Hungatella, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(22081..23595)
DNA (1515bp) protein (505aa)
Uncharacterized protein n=1 Tax=Clostridium hathewayi 12489931 RepID=N9X2N4_9CLOT
Uncharacterized protein {ECO:0000313|EMBL:ENY89971.1}; TaxID=999412 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Hungatella.;" source="Hungatella hathewayi 12489931.;"
putative transcriptional regulator with HTH domain
Displaying items 1-30 of 70 in total

View Taxonomy