ggKbase home page

L3_102_034G1_scaffold_189

Search features with annotation key words

Displaying items 1-30 of 61 in total
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
L3_102_034G1_scaffold_189_1
Porphyromonas sp. 31_2, Porphyromonas, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

225..647
DNA (423bp) protein (141aa)
Uncharacterized protein n=6 Tax=Bacteroidales RepID=A6KY69_BACV8
Uncharacterized protein {ECO:0000313|EMBL:KEJ85494.1}; TaxID=658663 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Porphyromonadaceae; Porphyromonas.;" source="Porphyromonas sp. 31_2.;"
hypothetical protein
L3_102_034G1_scaffold_189_2
Parabacteroides sp. 20_3, Parabacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

656..1879
DNA (1224bp) protein (408aa)
Relaxase/mobilization nuclease domain protein n=1 Tax=Parabacteroides sp. 20_3 RepID=E1YYM5_9PORP
Relaxase/mobilization nuclease domain protein {ECO:0000313|EMBL:EFK61094.1}; TaxID=469591 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Porphyromonadaceae; Parabacteroides.;" source="Parabacteroides sp. 20_3.;"
mobilization protein
L3_102_034G1_scaffold_189_3
Bacteroides sp. 9_1_42FAA, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

1916..2647
DNA (732bp) protein (244aa)
TraG family protein n=4 Tax=Bacteroides RepID=C3Q6Y0_9BACE
TraG family protein {ECO:0000313|EMBL:EEO63329.1}; TaxID=457395 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides.;" source="Bacteroides sp. 9_1_42FAA.;"
mobilization protein
L3_102_034G1_scaffold_189_4
Tannerella sp. oral taxon BU063, Tannerella, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

3194..5026
DNA (1833bp) protein (611aa)
Reverse transcriptase (RNA-dependent DNA polymerase) n=12 Tax=Bacteroides RepID=D4VLH6_9BACE
Maturase {ECO:0000313|EMBL:ETK12108.1}; TaxID=1411915 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Porphyromonadaceae; Tannerella.;" source="Tannerella sp. oral taxon BU063 isolate Cell 8/11.;"
Retron-type RNA-directed DNA polymerase
L3_102_034G1_scaffold_189_5
Bacteroides sp. 9_1_42FAA, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

5013..6470
DNA (1458bp) protein (486aa)
TraG family protein n=4 Tax=Bacteroides RepID=C3Q6Y0_9BACE
TraG family protein {ECO:0000313|EMBL:EEO63329.1}; TaxID=457395 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides.;" source="Bacteroides sp. 9_1_42FAA.;"
mobilization protein
L3_102_034G1_scaffold_189_6
Bacteroides fragilis, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

6791..7186
DNA (396bp) protein (132aa)
Uncharacterized protein n=3 Tax=Bacteroides RepID=I9GJA1_BACFG
Uncharacterized protein {ECO:0000313|EMBL:EIY44234.1}; TaxID=997878 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides.;" source="Bacteroides fragilis CL03T00C08.;"
hypothetical protein
L3_102_034G1_scaffold_189_7
Bacteroides fragilis, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(7192..8502)
DNA (1311bp) protein (437aa)
Uncharacterized protein n=3 Tax=Bacteroides RepID=I8X050_BACFG
Uncharacterized protein {ECO:0000313|EMBL:EIY44235.1}; TaxID=997878 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides.;" source="Bacteroides fragilis CL03T00C08.;"
two-component system response regulator
L3_102_034G1_scaffold_189_8
Bacteroides sp. 9_1_42FAA, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(8441..10816)
DNA (2376bp) protein (792aa)
ATPase/histidine kinase/DNA gyrase B/HSP90 domain protein n=1 Tax=Bacteroides sp. 9_1_42FAA RepID=C3Q6X7_9BACE
ATPase/histidine kinase/DNA gyrase B/HSP90 domain protein {ECO:0000313|EMBL:EEO63326.1}; TaxID=457395 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides.;" source="Bacteroides sp. 9_1_42FAA.;"
two-component system sensor histidine kinase
L3_102_034G1_scaffold_189_9
Bacteroides vulgatus, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(11146..13407)
DNA (2262bp) protein (754aa)
Helicase, putative n=5 Tax=Bacteroidales RepID=A6KY75_BACV8
Helicase, putative {ECO:0000313|EMBL:ABR38389.1}; TaxID=435590 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides.;" source="Bacteroides vulgatus (strain ATCC 8482 / DSM 1447 / NCTC 11154).;"
helicase
L3_102_034G1_scaffold_189_10

Not on your lists

comp(13796..15004)
DNA (1209bp) protein (403aa)
Uncharacterized protein n=1 Tax=gut metagenome RepID=J9H270_9ZZZZ
Uncharacterized protein {ECO:0000313|EMBL:EJX09943.1}; TaxID=749906 species="unclassified sequences; metagenomes; organismal metagenomes.;" source="gut metagenome.;"
hypothetical protein
L3_102_034G1_scaffold_189_11
Bacteroides fragilis, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(15053..15871)
DNA (819bp) protein (273aa)
Uncharacterized protein n=2 Tax=Bacteroides massiliensis RepID=U6RDF8_9BACE
Uncharacterized protein {ECO:0000313|EMBL:EXZ71929.1}; TaxID=1339314 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides.;" source="Bacteroides fragilis str. 3976T8.;"
hypothetical protein
L3_102_034G1_scaffold_189_12
Bacteroides massiliensis, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(15861..16775)
DNA (915bp) protein (305aa)
Uncharacterized protein n=1 Tax=Bacteroides massiliensis B84634 = Timone 84634 = DSM 17679 = JCM 13223 RepID=U6RDU9_9BACE
Uncharacterized protein {ECO:0000313|EMBL:EOA54670.1}; TaxID=1121098 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides.;" source="Bacteroides massiliensis B84634 = Timone 84634 = DSM 17679 = JCM; 13223.;"
hypothetical protein
L3_102_034G1_scaffold_189_13
Porphyromonas sp. 31_2, Porphyromonas, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(16756..18660)
DNA (1905bp) protein (635aa)
Polysaccharide biosynthesis protein n=1 Tax=Bacteroides sp. CAG:98 RepID=R7NJ84_9BACE
Uncharacterized protein {ECO:0000313|EMBL:KEJ85501.1}; TaxID=658663 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Porphyromonadaceae; Porphyromonas.;" source="Porphyromonas sp. 31_2.;"
nucleotide-diphosphate sugar epimerase
L3_102_034G1_scaffold_189_14
Porphyromonas sp. 31_2, Porphyromonas, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(18685..19965)
DNA (1281bp) protein (427aa)
Uncharacterized protein n=1 Tax=Parabacteroides merdae CL03T12C32 RepID=K5YPG7_9PORP
Uncharacterized protein {ECO:0000313|EMBL:KEJ85502.1}; TaxID=658663 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Porphyromonadaceae; Porphyromonas.;" source="Porphyromonas sp. 31_2.;"
DegT/DnrJ/EryC1/StrS aminotransferase
L3_102_034G1_scaffold_189_15
Prevotella copri, Prevotella, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(20077..20814)
DNA (738bp) protein (246aa)
Haloacid dehalogenase-like hydrolase n=1 Tax=Prevotella copri DSM 18205 RepID=D1PFD4_9BACT
Haloacid dehalogenase-like hydrolase {ECO:0000313|EMBL:EFB34507.1}; TaxID=537011 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Prevotellaceae; Prevotella.;" source="Prevotella copri DSM 18205.;"
HAD family hydrolase
L3_102_034G1_scaffold_189_16
Prevotella copri, Prevotella, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(20795..21751)
DNA (957bp) protein (319aa)
ATP-grasp domain protein n=1 Tax=Prevotella copri DSM 18205 RepID=D1PFD7_9BACT
ATP-grasp domain protein {ECO:0000313|EMBL:EFB34510.1}; TaxID=537011 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Prevotellaceae; Prevotella.;" source="Prevotella copri DSM 18205.;"
carbamoyl-phosphate synthase large subunit
L3_102_034G1_scaffold_189_17
Bacteroides fragilis, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(21741..22427)
DNA (687bp) protein (229aa)
Sialic acid O-acetyltransferase NeuD family sugar O-acyltransferase n=1 Tax=Parabacteroides goldsteinii dnLKV18 RepID=S0GSG7_9PORP
Sugar O-acyltransferase, sialic acid O-acetyltransferase NeuD family protein {ECO:0000313|EMBL:EXZ72164.1}; TaxID=1339314 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides.;" source="Bacteroides fragilis str. 3976T8.;"
sugar O-acyltransferase, sialic acid O-acetyltransferase NeuD family
L3_102_034G1_scaffold_189_18
Bacteroides fragilis, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(22445..23122)
DNA (678bp) protein (226aa)
Uncharacterized protein n=2 Tax=Parabacteroides sp. D25 RepID=K6BP78_9PORP
GlcNAc-PI de-N-acetylase family protein {ECO:0000313|EMBL:EXZ71950.1}; TaxID=1339314 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides.;" source="Bacteroides fragilis str. 3976T8.;"
lmbe family protein
L3_102_034G1_scaffold_189_19
Bacteroides fragilis, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(23119..23733)
DNA (615bp) protein (205aa)
Pilin glycosylation protein PglB n=2 Tax=Bacteroidales RepID=D7IMN7_9BACE
Bacterial sugar transferase family protein {ECO:0000313|EMBL:EXZ72197.1}; TaxID=1339314 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides.;" source="Bacteroides fragilis str. 3976T8.;"
UDP-galactose phosphate transferase
L3_102_034G1_scaffold_189_20
Bacteroides fragilis, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(23743..24810)
DNA (1068bp) protein (356aa)
Uncharacterized protein n=1 Tax=Bacteroides uniformis dnLKV2 RepID=R9I0A8_BACUN
ATP-grasp domain protein {ECO:0000313|EMBL:EXZ71951.1}; TaxID=1339314 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides.;" source="Bacteroides fragilis str. 3976T8.;"
carbamoylphosphate synthase large subunit, short form
L3_102_034G1_scaffold_189_21
Bacteroides fragilis, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(24810..26051)
DNA (1242bp) protein (414aa)
Uncharacterized protein n=1 Tax=Bacteroides uniformis dnLKV2 RepID=R9HSJ9_BACUN
Pyridoxal-dependent decarboxylase, pyridoxal binding domain protein {ECO:0000313|EMBL:EXZ72017.1}; TaxID=1339314 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides.;" source="Bacteroides fragilis str. 3976T8.;"
diaminopimelate decarboxylase
L3_102_034G1_scaffold_189_22
Bacteroides fragilis, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(26057..27196)
DNA (1140bp) protein (380aa)
Uncharacterized protein n=1 Tax=Dehalobacter sp. CF RepID=K4L3X2_9FIRM
4Fe-4S binding domain protein {ECO:0000313|EMBL:EXZ72141.1}; TaxID=1339314 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides.;" source="Bacteroides fragilis str. 3976T8.;"
hypothetical protein
L3_102_034G1_scaffold_189_23
Bacteroides fragilis, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(27193..28317)
DNA (1125bp) protein (375aa)
Uncharacterized protein n=1 Tax=Clostridium sp. CAG:356 RepID=R7A1M0_9CLOT
Polysaccharide pyruvyl transferase family protein {ECO:0000313|EMBL:EXZ72056.1}; TaxID=1339314 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides.;" source="Bacteroides fragilis str. 3976T8.;"
hypothetical protein
L3_102_034G1_scaffold_189_24
Bacteroides fragilis, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(28333..29730)
DNA (1398bp) protein (466aa)
Polysaccharide biosynthesis protein n=1 Tax=Blautia hansenii DSM 20583 RepID=C9LBR6_BLAHA
Polysaccharide biosynthesis family protein {ECO:0000313|EMBL:EXZ71995.1}; TaxID=1339314 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides.;" source="Bacteroides fragilis str. 3976T8.;"
Membrane protein involved in the export of O-antigen and teichoic acid
L3_102_034G1_scaffold_189_25
Bacteroides fragilis, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(29747..31132)
DNA (1386bp) protein (462aa)
Uncharacterized protein n=1 Tax=Staphylococcus caprae M23864:W1 RepID=C5QNG1_9STAP
Putative membrane protein {ECO:0000313|EMBL:EXZ72137.1}; TaxID=1339314 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides.;" source="Bacteroides fragilis str. 3976T8.;"
hypothetical protein
L3_102_034G1_scaffold_189_26
Bacteroides fragilis, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(31139..32239)
DNA (1101bp) protein (367aa)
Uncharacterized protein n=1 Tax=Bacillus cereus AND1407 RepID=J7XI49_BACCE
Glycosyl transferases group 1 family protein {ECO:0000313|EMBL:EXZ71980.1}; TaxID=1339314 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides.;" source="Bacteroides fragilis str. 3976T8.;"
group 1 glycosyl transferase
L3_102_034G1_scaffold_189_27
Bacteroides fragilis, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(32236..32652)
DNA (417bp) protein (139aa)
serine acetyltransferase n=1 Tax=Actinomyces oris RepID=UPI0002003605
Bacterial transferase hexapeptide family protein {ECO:0000313|EMBL:EXZ72000.1}; TaxID=1339314 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides.;" source="Bacteroides fragilis str. 3976T8.;"
hexapeptide transferase family protein
L3_102_034G1_scaffold_189_28
Bacteroides fragilis, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(32667..33449)
DNA (783bp) protein (261aa)
Glycosyltransferase, group 2 family protein n=1 Tax=Clostridium methylpentosum DSM 5476 RepID=C0ECJ2_9CLOT
Glycosyl transferase 2 family protein {ECO:0000313|EMBL:EXZ72181.1}; TaxID=1339314 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides.;" source="Bacteroides fragilis str. 3976T8.;"
glycosyltransferase
L3_102_034G1_scaffold_189_29
Bacteroides fragilis, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(33455..34606)
DNA (1152bp) protein (384aa)
Putative uncharacterized protein n=1 Tax=Lachnospiraceae bacterium 9_1_43BFAA RepID=F3AHX3_9FIRM
Glycosyl transferases group 1 family protein {ECO:0000313|EMBL:EXZ72092.1}; TaxID=1339314 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides.;" source="Bacteroides fragilis str. 3976T8.;"
group 1 glycosyl transferase
L3_102_034G1_scaffold_189_30
Bacteroides sp. 3_1_19, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(34629..35900)
DNA (1272bp) protein (424aa)
Nucleotide sugar dehydrogenase n=3 Tax=Bacteroidales RepID=C7XEQ5_9PORP
UDP-N-acetyl-D-galactosamine dehydrogenase
UDP-glucose-6 dehydrogenase {ECO:0000313|EMBL:EFI09117.1}; TaxID=469592 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides.;" source="Bacteroides sp. 3_1_19.;"
Displaying items 1-30 of 61 in total

View Taxonomy