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L3_102_034G1_scaffold_201

Search features with annotation key words

Displaying items 1-30 of 53 in total
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
L3_102_034G1_scaffold_201_1
Lactobacillus rhamnosus, Lactobacillus, Lactobacillales, Bacilli, Firmicutes, Bacteria

Not on your lists

comp(267..1064)
DNA (798bp) protein (266aa)
Regulatory protein RecX n=5 Tax=Lactobacillus rhamnosus RepID=C7TKB8_LACRL
recX family protein
Regulatory protein RecX {ECO:0000256|HAMAP-Rule:MF_01114, ECO:0000256|SAAS:SAAS00093789}; TaxID=1318634 species="Bacteria; Firmicutes; Bacilli; Lactobacillales; Lactobacillaceae; Lactobacillus.;" source="Lactobacillus rhamnosus LOCK908.;"
L3_102_034G1_scaffold_201_2
Lactobacillus rhamnosus, Lactobacillus, Lactobacillales, Bacilli, Firmicutes, Bacteria

Not on your lists

1136..2656
DNA (1521bp) protein (507aa)
Transcriptional regulator n=4 Tax=Lactobacillus rhamnosus RepID=C7TKB9_LACRL
mga helix-turn-helix domain protein
Uncharacterized protein {ECO:0000313|EMBL:AGP74503.1}; TaxID=1318634 species="Bacteria; Firmicutes; Bacilli; Lactobacillales; Lactobacillaceae; Lactobacillus.;" source="Lactobacillus rhamnosus LOCK908.;"
L3_102_034G1_scaffold_201_3
Lactobacillus rhamnosus, Lactobacillus, Lactobacillales, Bacilli, Firmicutes, Bacteria

Not on your lists

comp(2663..3043)
DNA (381bp) protein (127aa)
Conserved protein n=7 Tax=Lactobacillus rhamnosus RepID=C7TDN5_LACRG
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:AGP74504.1}; TaxID=1318634 species="Bacteria; Firmicutes; Bacilli; Lactobacillales; Lactobacillaceae; Lactobacillus.;" source="Lactobacillus rhamnosus LOCK908.;"
L3_102_034G1_scaffold_201_4
Lactobacillus rhamnosus, Lactobacillus, Lactobacillales, Bacilli, Firmicutes, Bacteria

Not on your lists

3121..4488
DNA (1368bp) protein (456aa)
RNA methyltransferase n=5 Tax=Lactobacillus rhamnosus RepID=C7TKC1_LACRL
rumA; 23S rRNA (uracil-5-)-methyltransferase RumA
RNA methyltransferase, TrmA family {ECO:0000313|EMBL:AGP74505.1}; TaxID=1318634 species="Bacteria; Firmicutes; Bacilli; Lactobacillales; Lactobacillaceae; Lactobacillus.;" source="Lactobacillus rhamnosus LOCK908.;"
L3_102_034G1_scaffold_201_5
Lactobacillus rhamnosus, Lactobacillus, Lactobacillales, Bacilli, Firmicutes, Bacteria

Not on your lists

4599..5078
DNA (480bp) protein (160aa)
Nucleoside 2-deoxyribosyltransferase n=4 Tax=Lactobacillus rhamnosus RepID=C7TKC2_LACRL
hypothetical protein
Nucleoside 2-deoxyribosyltransferase {ECO:0000313|EMBL:EEN79976.1}; TaxID=525361 species="Bacteria; Firmicutes; Bacilli; Lactobacillales; Lactobacillaceae; Lactobacillus.;" source="Lactobacillus rhamnosus LMS2-1.;"
L3_102_034G1_scaffold_201_6
Lactobacillus rhamnosus, Lactobacillus, Lactobacillales, Bacilli, Firmicutes, Bacteria

Not on your lists

comp(5140..6894)
DNA (1755bp) protein (585aa)
Pyruvate oxidase n=5 Tax=Lactobacillus rhamnosus RepID=C7TKC3_LACRL
spxB; pyruvate oxidase
Pyruvate oxidase {ECO:0000313|EMBL:AGP74507.1}; TaxID=1318634 species="Bacteria; Firmicutes; Bacilli; Lactobacillales; Lactobacillaceae; Lactobacillus.;" source="Lactobacillus rhamnosus LOCK908.;"
L3_102_034G1_scaffold_201_7
Lactobacillus rhamnosus, Lactobacillus, Lactobacillales, Bacilli, Firmicutes, Bacteria

Not on your lists

comp(6995..7231)
DNA (237bp) protein (79aa)
Uncharacterized protein n=3 Tax=Lactobacillus rhamnosus RepID=C7TKC4_LACRL
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:EEN79978.1}; TaxID=525361 species="Bacteria; Firmicutes; Bacilli; Lactobacillales; Lactobacillaceae; Lactobacillus.;" source="Lactobacillus rhamnosus LMS2-1.;"
L3_102_034G1_scaffold_201_8
Lactobacillus rhamnosus, Lactobacillus, Lactobacillales, Bacilli, Firmicutes, Bacteria

Not on your lists

comp(7507..8679)
DNA (1173bp) protein (391aa)
mvaS; hydroxymethylglutaryl-CoA synthase (EC:2.3.3.10)
Hydroxymethylglutaryl-CoA synthase n=4 Tax=Lactobacillus rhamnosus RepID=C7TKC5_LACRL
Hydroxymethylglutaryl-CoA synthase {ECO:0000313|EMBL:AGP74509.1}; TaxID=1318634 species="Bacteria; Firmicutes; Bacilli; Lactobacillales; Lactobacillaceae; Lactobacillus.;" source="Lactobacillus rhamnosus LOCK908.;"
L3_102_034G1_scaffold_201_9
Lactobacillus rhamnosus, Lactobacillus, Lactobacillales, Bacilli, Firmicutes, Bacteria

Not on your lists

comp(8699..9943)
DNA (1245bp) protein (415aa)
3-hydroxy-3-methylglutaryl coenzyme A reductase {ECO:0000256|RuleBase:RU361219}; Short=HMG-CoA reductase {ECO:0000256|RuleBase:RU361219};; EC=1.1.1.88 {ECO:0000256|RuleBase:RU361219};; TaxID=1318634 species="Bacteria; Firmicutes; Bacilli; Lactobacillales; Lactobacillaceae; Lactobacillus.;" source="Lactobacillus rhamnosus LOCK908.;"
Hydroxymethylglutaryl-CoA reductase n=5 Tax=Lactobacillus rhamnosus RepID=C7TKC6_LACRL
hydroxymethylglutaryl-CoA reductase, degradative
L3_102_034G1_scaffold_201_10
Lactobacillus rhamnosus, Lactobacillus, Lactobacillales, Bacilli, Firmicutes, Bacteria

Not on your lists

comp(9956..11137)
DNA (1182bp) protein (394aa)
Acetyl-CoA acetyltransferase n=4 Tax=Lactobacillus rhamnosus RepID=C7TKC7_LACRL
phbA; acetyl-CoA acetyltransferase
3-ketoacyl-CoA thiolase/Acetyl-CoA acetyltransferase {ECO:0000313|EMBL:AGP74511.1}; TaxID=1318634 species="Bacteria; Firmicutes; Bacilli; Lactobacillales; Lactobacillaceae; Lactobacillus.;" source="Lactobacillus rhamnosus LOCK908.;"
L3_102_034G1_scaffold_201_11
Lactobacillus rhamnosus, Lactobacillus, Lactobacillales, Bacilli, Firmicutes, Bacteria

Not on your lists

11731..12030
DNA (300bp) protein (100aa)
Conserved protein n=5 Tax=Lactobacillus rhamnosus RepID=C7TKC8_LACRL
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:AGP74514.1}; TaxID=1318634 species="Bacteria; Firmicutes; Bacilli; Lactobacillales; Lactobacillaceae; Lactobacillus.;" source="Lactobacillus rhamnosus LOCK908.;"
L3_102_034G1_scaffold_201_12
Lactobacillus rhamnosus, Lactobacillus, Lactobacillales, Bacilli, Firmicutes, Bacteria

Not on your lists

comp(12027..12857)
DNA (831bp) protein (277aa)
Sugar phosphate isomerase/epimerase n=5 Tax=Lactobacillus rhamnosus RepID=C7TKC9_LACRL
pepQ; sugar phosphate isomerase/epimerase
Sugar phosphate isomerase/epimerase {ECO:0000313|EMBL:AGP74515.1}; TaxID=1318634 species="Bacteria; Firmicutes; Bacilli; Lactobacillales; Lactobacillaceae; Lactobacillus.;" source="Lactobacillus rhamnosus LOCK908.;"
L3_102_034G1_scaffold_201_13
Lactobacillus rhamnosus, Lactobacillus, Lactobacillales, Bacilli, Firmicutes, Bacteria

Not on your lists

comp(12891..13454)
DNA (564bp) protein (188aa)
Predicted Mrr-like endonuclease n=11 Tax=Lactobacillus rhamnosus RepID=B5QMD5_LACRH
restriction endonuclease family protein
Uncharacterized protein {ECO:0000313|EMBL:AGP74516.1}; TaxID=1318634 species="Bacteria; Firmicutes; Bacilli; Lactobacillales; Lactobacillaceae; Lactobacillus.;" source="Lactobacillus rhamnosus LOCK908.;"
L3_102_034G1_scaffold_201_14
Lactobacillus rhamnosus, Lactobacillus, Lactobacillales, Bacilli, Firmicutes, Bacteria

Not on your lists

comp(13715..13849)
DNA (135bp) protein (45aa)
Uncharacterized protein n=2 Tax=Lactobacillus rhamnosus RepID=K8Q2F5_LACRH
Uncharacterized protein {ECO:0000313|EMBL:EKS48977.1}; TaxID=1203258 species="Bacteria; Firmicutes; Bacilli; Lactobacillales; Lactobacillaceae; Lactobacillus.;" source="Lactobacillus rhamnosus LRHMDP2.;"
L3_102_034G1_scaffold_201_15
Lactobacillus rhamnosus, Lactobacillus, Lactobacillales, Bacilli, Firmicutes, Bacteria

Not on your lists

13908..14741
DNA (834bp) protein (278aa)
Aldose 1-epimerase n=5 Tax=Lactobacillus rhamnosus RepID=C7TKD1_LACRL
Aldose 1-epimerase
Aldose 1-epimerase {ECO:0000313|EMBL:EEN79958.1}; TaxID=525361 species="Bacteria; Firmicutes; Bacilli; Lactobacillales; Lactobacillaceae; Lactobacillus.;" source="Lactobacillus rhamnosus LMS2-1.;"
L3_102_034G1_scaffold_201_16
Lactobacillus rhamnosus, Lactobacillus, Lactobacillales, Bacilli, Firmicutes, Bacteria

Not on your lists

comp(14838..16010)
DNA (1173bp) protein (391aa)
Peptidase, ArgE/DapE family protein n=4 Tax=Lactobacillus rhamnosus RepID=G7V2Z4_LACRH
peptidase, ArgE/DapE family protein
Acetylornithine deacetylase {ECO:0000313|EMBL:AGP74518.1}; TaxID=1318634 species="Bacteria; Firmicutes; Bacilli; Lactobacillales; Lactobacillaceae; Lactobacillus.;" source="Lactobacillus rhamnosus LOCK908.;"
L3_102_034G1_scaffold_201_17
Lactobacillus rhamnosus, Lactobacillus, Lactobacillales, Bacilli, Firmicutes, Bacteria

Not on your lists

comp(16112..16717)
DNA (606bp) protein (202aa)
Conserved membrane protein n=9 Tax=Lactobacillus rhamnosus RepID=C7TKD3_LACRL
hypothetical protein
Substrate-specific component PanT of predicted pantothenate ECF transporter {ECO:0000313|EMBL:AGP74519.1}; TaxID=1318634 species="Bacteria; Firmicutes; Bacilli; Lactobacillales; Lactobacillaceae; Lactobacillus.;" source="Lactobacillus rhamnosus LOCK908.;"
L3_102_034G1_scaffold_201_18
Lactobacillus rhamnosus, Lactobacillus, Lactobacillales, Bacilli, Firmicutes, Bacteria

Not on your lists

17418..17882
DNA (465bp) protein (155aa)
Acetyltransferase, GNAT family protein n=7 Tax=Lactobacillus rhamnosus RepID=B5QMD1_LACRH
acetyltransferase family protein
Acetyltransferase, GNAT family {ECO:0000313|EMBL:AGP74521.1}; TaxID=1318634 species="Bacteria; Firmicutes; Bacilli; Lactobacillales; Lactobacillaceae; Lactobacillus.;" source="Lactobacillus rhamnosus LOCK908.;"
L3_102_034G1_scaffold_201_19
Lactobacillus rhamnosus, Lactobacillus, Lactobacillales, Bacilli, Firmicutes, Bacteria

Not on your lists

comp(17879..18331)
DNA (453bp) protein (151aa)
Metallopeptidase, SprT family n=6 Tax=Lactobacillus rhamnosus RepID=C7TKD6_LACRL
hypothetical protein
SprT-like protein {ECO:0000313|EMBL:KIC97371.1}; TaxID=47715 species="Bacteria; Firmicutes; Bacilli; Lactobacillales; Lactobacillaceae; Lactobacillus.;" source="Lactobacillus rhamnosus.;"
L3_102_034G1_scaffold_201_20
Lactobacillus rhamnosus, Lactobacillus, Lactobacillales, Bacilli, Firmicutes, Bacteria

Not on your lists

comp(18579..19331)
DNA (753bp) protein (251aa)
ABC transporter, ATPase component n=7 Tax=Lactobacillus rhamnosus RepID=C7TKD7_LACRL
ABC transporter ATPase
ABC transporter ATP-binding protein {ECO:0000313|EMBL:AGP74523.1}; TaxID=1318634 species="Bacteria; Firmicutes; Bacilli; Lactobacillales; Lactobacillaceae; Lactobacillus.;" source="Lactobacillus rhamnosus LOCK908.;"
L3_102_034G1_scaffold_201_21
Lactobacillus rhamnosus, Lactobacillus, Lactobacillales, Bacilli, Firmicutes, Bacteria

Not on your lists

comp(19324..20223)
DNA (900bp) protein (300aa)
ABC transporter, permease protein n=5 Tax=Lactobacillus rhamnosus RepID=C7TKD8_LACRL
ABC-MSP; ABC transporter permease
ABC transporter permease protein {ECO:0000313|EMBL:AGP74524.1}; TaxID=1318634 species="Bacteria; Firmicutes; Bacilli; Lactobacillales; Lactobacillaceae; Lactobacillus.;" source="Lactobacillus rhamnosus LOCK908.;"
L3_102_034G1_scaffold_201_22
Lactobacillus rhamnosus, Lactobacillus, Lactobacillales, Bacilli, Firmicutes, Bacteria

Not on your lists

comp(20220..21215)
DNA (996bp) protein (332aa)
ABC transporter, substrate-binding protein n=5 Tax=Lactobacillus rhamnosus RepID=C7TKD9_LACRL
ABC transporter substrate binding family protein
ABC transporter substrate-binding protein {ECO:0000313|EMBL:AGP74525.1}; TaxID=1318634 species="Bacteria; Firmicutes; Bacilli; Lactobacillales; Lactobacillaceae; Lactobacillus.;" source="Lactobacillus rhamnosus LOCK908.;"
L3_102_034G1_scaffold_201_23
Lactobacillus rhamnosus, Lactobacillus, Lactobacillales, Bacilli, Firmicutes, Bacteria

Not on your lists

comp(21600..22037)
DNA (438bp) protein (146aa)
Conserved protein n=4 Tax=Lactobacillus rhamnosus RepID=C7TKE0_LACRL
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:AGP74526.1}; TaxID=1318634 species="Bacteria; Firmicutes; Bacilli; Lactobacillales; Lactobacillaceae; Lactobacillus.;" source="Lactobacillus rhamnosus LOCK908.;"
L3_102_034G1_scaffold_201_24
Lactobacillus rhamnosus, Lactobacillus, Lactobacillales, Bacilli, Firmicutes, Bacteria

Not on your lists

comp(22098..24761)
DNA (2664bp) protein (888aa)
Putative potassium/sodium efflux P-type ATPase, fungal-type {ECO:0000313|EMBL:EEN79968.1}; EC=3.6.3.8 {ECO:0000313|EMBL:EEN79968.1};; TaxID=525361 species="Bacteria; Firmicutes; Bacilli; Lactobacillales; Lactobacillaceae; Lactobacillus.;" source="Lactobacillus rhamnosus LMS2-1.;"
HAD ATPase, P-type, IC family protein n=1 Tax=Lactobacillus rhamnosus ATCC 8530 RepID=G7V303_LACRH
HAD ATPase, P-type, IC family protein
L3_102_034G1_scaffold_201_25
Lactobacillus rhamnosus, Lactobacillus, Lactobacillales, Bacilli, Firmicutes, Bacteria

Not on your lists

comp(25276..26526)
DNA (1251bp) protein (417aa)
Beta-lactamase n=3 Tax=Lactobacillus rhamnosus RepID=C2JYC4_LACRH
Beta-lactamase {ECO:0000313|EMBL:EEN79954.1}; TaxID=525361 species="Bacteria; Firmicutes; Bacilli; Lactobacillales; Lactobacillaceae; Lactobacillus.;" source="Lactobacillus rhamnosus LMS2-1.;"
beta-lactamase family protein
L3_102_034G1_scaffold_201_26
Lactobacillus rhamnosus, Lactobacillus, Lactobacillales, Bacilli, Firmicutes, Bacteria

Not on your lists

comp(26548..27375)
DNA (828bp) protein (276aa)
NH(3)-dependent NAD(+) synthetase {ECO:0000256|HAMAP-Rule:MF_00193, ECO:0000256|RuleBase:RU003812}; EC=6.3.1.5 {ECO:0000256|HAMAP-Rule:MF_00193, ECO:0000256|RuleBase:RU003812};; TaxID=47715 species="Bacteria; Firmicutes; Bacilli; Lactobacillales; Lactobacillaceae; Lactobacillus.;" source="Lactobacillus rhamnosus.;"
NH(3)-dependent NAD(+) synthetase n=5 Tax=Lactobacillus rhamnosus RepID=C7TKE5_LACRL
NAD synthetase
L3_102_034G1_scaffold_201_27
Lactobacillus rhamnosus, Lactobacillus, Lactobacillales, Bacilli, Firmicutes, Bacteria

Not on your lists

comp(27375..28571)
DNA (1197bp) protein (399aa)
Beta-lactamase class C related penicillin binding protein n=5 Tax=Lactobacillus rhamnosus RepID=C7TKE6_LACRL
pbpX; beta-lactamase class C-like penicillin binding protein
Beta-lactamase class C-like penicillin binding protein {ECO:0000313|EMBL:AGP74531.1}; TaxID=1318634 species="Bacteria; Firmicutes; Bacilli; Lactobacillales; Lactobacillaceae; Lactobacillus.;" source="Lactobacillus rhamnosus LOCK908.;"
L3_102_034G1_scaffold_201_28
Lactobacillus rhamnosus, Lactobacillus, Lactobacillales, Bacilli, Firmicutes, Bacteria

Not on your lists

comp(28585..30051)
DNA (1467bp) protein (489aa)
Nicotinate phosphoribosyltransferase {ECO:0000256|RuleBase:RU003838, ECO:0000256|SAAS:SAAS00075163}; EC=6.3.4.21 {ECO:0000256|RuleBase:RU003838, ECO:0000256|SAAS:SAAS00075163};; TaxID=1318634 species="Bacteria; Firmicutes; Bacilli; Lactobacillales; Lactobacillaceae; Lactobacillus.;" source="Lactobacillus rhamnosus LOCK908.;"
Nicotinate phosphoribosyltransferase n=6 Tax=Lactobacillus rhamnosus RepID=C7TKE7_LACRL
pncB; nicotinate phosphoribosyltransferase
L3_102_034G1_scaffold_201_29
Lactobacillus rhamnosus, Lactobacillus, Lactobacillales, Bacilli, Firmicutes, Bacteria

Not on your lists

comp(30520..31221)
DNA (702bp) protein (234aa)
Transcriptional regulator n=12 Tax=Lactobacillus rhamnosus RepID=B5QMB9_LACRH
def; GntR family transcriptional regulator
Transcriptional regulator, GntR family {ECO:0000313|EMBL:AGP74533.1}; TaxID=1318634 species="Bacteria; Firmicutes; Bacilli; Lactobacillales; Lactobacillaceae; Lactobacillus.;" source="Lactobacillus rhamnosus LOCK908.;"
L3_102_034G1_scaffold_201_30
Lactobacillus rhamnosus, Lactobacillus, Lactobacillales, Bacilli, Firmicutes, Bacteria

Not on your lists

comp(31247..32392)
DNA (1146bp) protein (382aa)
N-acetylglucosamine-6-phosphate deacetylase {ECO:0000256|PIRNR:PIRNR038994}; EC=3.5.1.25 {ECO:0000256|PIRNR:PIRNR038994};; GlcNAc 6-P deacetylase {ECO:0000256|PIRNR:PIRNR038994}; TaxID=1318634 species="Bacteria; Firmicutes; Bacilli; Lactobacillales; Lactobacillaceae; Lactobacillus.;" source="Lactobacillus rhamnosus LOCK908.;"
N-acetylglucosamine-6-phosphate deacetylase n=13 Tax=Lactobacillus rhamnosus RepID=B5QMB8_LACRH
nagA; N-acetylglucosamine-6-phosphate deacetylase
Displaying items 1-30 of 53 in total

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