ggKbase home page

L3_102_034G1_scaffold_235

Search features with annotation key words

Displaying items 1-30 of 35 in total
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
L3_102_034G1_scaffold_235_1
Bacteroides vulgatus, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(124..825)
DNA (702bp) protein (234aa)
Two-component system response regulator n=4 Tax=root RepID=A6KYL7_BACV8
two-component system response regulator
Uncharacterized protein {ECO:0000313|EMBL:EIY78628.1}; TaxID=997891 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides.;" source="Bacteroides vulgatus CL09T03C04.;"
L3_102_034G1_scaffold_235_2
Bacteroides sp. 4_3_47FAA, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(850..2235)
DNA (1386bp) protein (462aa)
Histidine kinase {ECO:0000256|SAAS:SAAS00251121}; EC=2.7.13.3 {ECO:0000256|SAAS:SAAS00251121};; TaxID=457394 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides.;" source="Bacteroides sp. 4_3_47FAA.;"
Two-component system sensor histidine kinase n=7 Tax=root RepID=A6KYL8_BACV8
two-component system sensor histidine kinase
L3_102_034G1_scaffold_235_3
Bacteroides vulgatus, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

2357..4654
DNA (2298bp) protein (766aa)
Putative uncharacterized protein n=1 Tax=Bacteroides vulgatus PC510 RepID=D4VAY1_BACVU
Cna B-type domain protein {ECO:0000313|EMBL:KDS27907.1}; TaxID=1339350 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides.;" source="Bacteroides vulgatus str. 3775 SL(B) 10 (iv).;"
hypothetical protein
L3_102_034G1_scaffold_235_4
Bacteroides vulgatus, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(4720..6414)
DNA (1695bp) protein (565aa)
C-terminal processing peptidase family protein {ECO:0000313|EMBL:KDS54232.1}; EC=3.4.21.- {ECO:0000313|EMBL:KDS54232.1};; TaxID=1339352 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides.;" source="Bacteroides vulgatus str. 3975 RP4.;"
Carboxy-terminal processing protease n=1 Tax=Bacteroides vulgatus (strain ATCC 8482 / DSM 1447 / NCTC 11154) RepID=A6KYM0_BACV8
carboxy-terminal processing protease
L3_102_034G1_scaffold_235_5
Bacteroides vulgatus, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(6458..7444)
DNA (987bp) protein (329aa)
Kinase, PfkB family n=1 Tax=Bacteroides vulgatus PC510 RepID=D4VAX9_BACVU
PfkB carbohydrate kinase family protein {ECO:0000313|EMBL:KDS27909.1}; TaxID=1339350 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides.;" source="Bacteroides vulgatus str. 3775 SL(B) 10 (iv).;"
PfkB family carbohydrate kinase
L3_102_034G1_scaffold_235_6
Bacteroides vulgatus, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

7891..12057
DNA (4167bp) protein (1389aa)
Sensor histidine kinase/response regulator n=1 Tax=Bacteroides vulgatus PC510 RepID=D4VAX8_BACVU
Sensor histidine kinase/response regulator {ECO:0000313|EMBL:EFG17331.1}; TaxID=702446 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides.;" source="Bacteroides vulgatus PC510.;"
histidine kinase
L3_102_034G1_scaffold_235_7
Bacteroides vulgatus, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

12146..14404
DNA (2259bp) protein (753aa)
Alpha-N-acetylglucosaminidase (NAGLU) n=1 Tax=Bacteroides vulgatus PC510 RepID=D4VAX7_BACVU
Alpha-N-acetylglucosaminidase (NAGLU) {ECO:0000313|EMBL:EFG17330.1}; TaxID=702446 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides.;" source="Bacteroides vulgatus PC510.;"
alpha-N-acetylglucosaminidase
L3_102_034G1_scaffold_235_8
Bacteroides vulgatus, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

14412..15530
DNA (1119bp) protein (373aa)
Putative membrane protein n=2 Tax=Bacteroides RepID=D4VAX6_BACVU
Uncharacterized protein {ECO:0000313|EMBL:KDS27912.1}; TaxID=1339350 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides.;" source="Bacteroides vulgatus str. 3775 SL(B) 10 (iv).;"
membrane protein
L3_102_034G1_scaffold_235_9
Bacteroides vulgatus, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

15606..18629
DNA (3024bp) protein (1008aa)
TonB-linked outer membrane protein, SusC/RagA family n=3 Tax=Bacteroides RepID=C3PXL0_9BACE
TonB-linked outer membrane , SusC/RagA family protein {ECO:0000313|EMBL:KDS27913.1}; TaxID=1339350 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides.;" source="Bacteroides vulgatus str. 3775 SL(B) 10 (iv).;"
TonB-dependent receptor
L3_102_034G1_scaffold_235_10
Bacteroides sp. 3_1_40A, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

18650..20290
DNA (1641bp) protein (547aa)
SusD family protein n=2 Tax=Bacteroides RepID=C6Z0H5_9BACE
RagB/SusD domain-containing protein {ECO:0000313|EMBL:EFV68922.1}; TaxID=469593 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides.;" source="Bacteroides sp. 3_1_40A.;"
glycan metabolism protein RagB
L3_102_034G1_scaffold_235_11
Bacteroides vulgatus CAG:6, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

20364..20696
DNA (333bp) protein (111aa)
Glycerophosphodiesterase n=1 Tax=Bacteroides vulgatus CAG:6 RepID=R7P4J1_9BACE
Glycerophosphodiesterase {ECO:0000313|EMBL:CDF19770.1}; TaxID=1263056 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides; environmental samples.;" source="Bacteroides vulgatus CAG:6.;"
glycerophosphodiester phosphodiesterase
L3_102_034G1_scaffold_235_12
Bacteroides vulgatus, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

20742..21176
DNA (435bp) protein (145aa)
Glycerophosphodiester phosphodiesterase family protein n=1 Tax=Bacteroides vulgatus PC510 RepID=D4VAX3_BACVU
Glycerophosphoryl diester phosphodiesterase family protein {ECO:0000313|EMBL:KDS27915.1}; TaxID=1339350 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides.;" source="Bacteroides vulgatus str. 3775 SL(B) 10 (iv).;"
glycerophosphodiester phosphodiesterase
L3_102_034G1_scaffold_235_13
Bacteroides vulgatus, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

21196..23529
DNA (2334bp) protein (778aa)
Putative alpha-1,2-mannosidase n=2 Tax=Bacteroides RepID=C6Z0H3_9BACE
Alpha-1,2-mannosidase family protein {ECO:0000313|EMBL:KDS27916.1}; TaxID=1339350 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides.;" source="Bacteroides vulgatus str. 3775 SL(B) 10 (iv).;"
alpha-mannosidase
L3_102_034G1_scaffold_235_14
Bacteroides vulgatus, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

23556..24968
DNA (1413bp) protein (471aa)
Polygalacturonase (Pectinase) n=1 Tax=Bacteroides vulgatus PC510 RepID=D4VAX1_BACVU
Polygalacturonase (Pectinase) {ECO:0000313|EMBL:EFG17324.1}; TaxID=702446 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides.;" source="Bacteroides vulgatus PC510.;"
glycoside hydrolase
L3_102_034G1_scaffold_235_15
Bacteroides vulgatus, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

24971..27250
DNA (2280bp) protein (760aa)
Putative alpha-1,2-mannosidase n=2 Tax=Bacteroides RepID=C6Z0H1_9BACE
Alpha-1,2-mannosidase family protein {ECO:0000313|EMBL:KDS27918.1}; TaxID=1339350 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides.;" source="Bacteroides vulgatus str. 3775 SL(B) 10 (iv).;"
alpha-mannosidase
L3_102_034G1_scaffold_235_16
Bacteroides vulgatus, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

27257..28996
DNA (1740bp) protein (580aa)
Histidine acid phosphatase n=1 Tax=Bacteroides vulgatus CAG:6 RepID=R7P231_9BACE
Histidine phosphatase super family protein {ECO:0000313|EMBL:KDS27919.1}; TaxID=1339350 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides.;" source="Bacteroides vulgatus str. 3775 SL(B) 10 (iv).;"
histidine acid phosphatase
L3_102_034G1_scaffold_235_17
Bacteroides vulgatus, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(29245..33279)
DNA (4035bp) protein (1345aa)
ATPase/histidine kinase/DNA gyrase B/HSP90 domain protein n=1 Tax=Bacteroides dorei 5_1_36/D4 RepID=C3R9U8_9BACE
His Kinase A domain protein {ECO:0000313|EMBL:KDS27920.1}; TaxID=1339350 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides.;" source="Bacteroides vulgatus str. 3775 SL(B) 10 (iv).;"
chemotaxis protein CheY
L3_102_034G1_scaffold_235_18
Bacteroides vulgatus CAG:6, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

33360..33470
DNA (111bp) protein (37aa)
Uncharacterized protein n=1 Tax=Bacteroides vulgatus CAG:6 RepID=R7P450_9BACE
Uncharacterized protein {ECO:0000313|EMBL:CDF19776.1}; TaxID=1263056 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides; environmental samples.;" source="Bacteroides vulgatus CAG:6.;"
L3_102_034G1_scaffold_235_19
Bacteroides dorei CAG:222, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

33475..36606
DNA (3132bp) protein (1044aa)
TonB-linked outer membrane protein, SusC/RagA family n=2 Tax=Bacteroides RepID=C3R9U9_9BACE
membrane protein
Uncharacterized protein {ECO:0000313|EMBL:CDB39059.1}; TaxID=1263042 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides; environmental samples.;" source="Bacteroides dorei CAG:222.;"
L3_102_034G1_scaffold_235_20
Bacteroides vulgatus CAG:6, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

36619..38469
DNA (1851bp) protein (617aa)
Uncharacterized protein n=1 Tax=Bacteroides vulgatus CAG:6 RepID=R7P676_9BACE
Uncharacterized protein {ECO:0000313|EMBL:CDF19778.1}; TaxID=1263056 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides; environmental samples.;" source="Bacteroides vulgatus CAG:6.;"
membrane protein
L3_102_034G1_scaffold_235_21
Bacteroides vulgatus, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

38482..39156
DNA (675bp) protein (225aa)
Uncharacterized protein n=3 Tax=Bacteroides RepID=C3R9V1_9BACE
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:KDS27923.1}; TaxID=1339350 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides.;" source="Bacteroides vulgatus str. 3775 SL(B) 10 (iv).;"
L3_102_034G1_scaffold_235_22
Bacteroides vulgatus CAG:6, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

39231..40820
DNA (1590bp) protein (530aa)
Glycoside hydrolase family 5 protein n=1 Tax=Bacteroides vulgatus CAG:6 RepID=R7P4J7_9BACE
Glycoside hydrolase family 5 protein {ECO:0000313|EMBL:CDF19780.1}; TaxID=1263056 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides; environmental samples.;" source="Bacteroides vulgatus CAG:6.;"
xylanase
L3_102_034G1_scaffold_235_23
Bacteroides vulgatus, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(40901..41923)
DNA (1023bp) protein (341aa)
Sugar-binding domain protein n=8 Tax=Bacteroides RepID=C3R9V3_9BACE
Uncharacterized protein {ECO:0000313|EMBL:EIY78617.1}; TaxID=997891 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides.;" source="Bacteroides vulgatus CL09T03C04.;"
LacI family transcriptional regulator
L3_102_034G1_scaffold_235_24
Bacteroides vulgatus, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(42063..43613)
DNA (1551bp) protein (517aa)
Alkyl hydroperoxide reductase, F subunit {ECO:0000313|EMBL:EFG17314.1}; EC=1.8.1.- {ECO:0000313|EMBL:EFG17314.1};; TaxID=702446 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides.;" source="Bacteroides vulgatus PC510.;"
Alkyl hydroperoxide reductase, F subunit n=4 Tax=root RepID=C6Z0G2_9BACE
alkyl hydroperoxide reductase subunit F
L3_102_034G1_scaffold_235_25
Bacteroides vulgatus, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(43626..44192)
DNA (567bp) protein (189aa)
Peroxiredoxin {ECO:0000313|EMBL:KDS48336.1}; EC=1.11.1.15 {ECO:0000313|EMBL:KDS48336.1};; TaxID=1339352 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides.;" source="Bacteroides vulgatus str. 3975 RP4.;"
Peroxiredoxin n=4 Tax=Bacteroides RepID=C6Z0G1_9BACE
alkyl hydroperoxide reductase subunit C
L3_102_034G1_scaffold_235_26
Bacteroides dorei, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

44699..45622
DNA (924bp) protein (308aa)
Mg2+/Co2+ transporter n=11 Tax=Bacteroides RepID=E5UPI1_9BACE
magnesium transporter CorA
Putative uncharacterized protein {ECO:0000313|EMBL:EEB22657.1}; TaxID=483217 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides.;" source="Bacteroides dorei DSM 17855.;"
L3_102_034G1_scaffold_235_27
Bacteroides vulgatus, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(45716..46912)
DNA (1197bp) protein (399aa)
Uncharacterized protein n=1 Tax=Bacteroides vulgatus CL09T03C04 RepID=I9U9A8_BACVU
Uncharacterized protein {ECO:0000313|EMBL:EIY78613.1}; TaxID=997891 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides.;" source="Bacteroides vulgatus CL09T03C04.;"
iron transporter
L3_102_034G1_scaffold_235_28
Bacteroides vulgatus, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(46929..48329)
DNA (1401bp) protein (467aa)
Putative lipoprotein n=1 Tax=Bacteroides vulgatus PC510 RepID=D4VAV6_BACVU
Uncharacterized protein {ECO:0000313|EMBL:KDS27930.1}; TaxID=1339350 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides.;" source="Bacteroides vulgatus str. 3775 SL(B) 10 (iv).;"
hypothetical protein
L3_102_034G1_scaffold_235_29
Bacteroides vulgatus, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(48387..50687)
DNA (2301bp) protein (767aa)
TonB-dependent receptor plug domain protein n=1 Tax=Bacteroides vulgatus PC510 RepID=D4VAV5_BACVU
TonB-dependent Receptor Plug domain protein {ECO:0000313|EMBL:KDS27931.1}; TaxID=1339350 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides.;" source="Bacteroides vulgatus str. 3775 SL(B) 10 (iv).;"
TonB-linked outer membrane receptor
L3_102_034G1_scaffold_235_30
Bacteroides thetaiotaomicron, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(51104..52348)
DNA (1245bp) protein (415aa)
Uncharacterized protein n=2 Tax=Bacteroides RepID=Q8A3G5_BACTN
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:AAO78095.1}; TaxID=226186 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides.;" source="Bacteroides thetaiotaomicron (strain ATCC 29148 / DSM 2079 / NCTC; 10582 / E50 / VPI-5482).;"
Displaying items 1-30 of 35 in total

View Taxonomy