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L3_102_034G1_scaffold_270

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Displaying items 1-30 of 35 in total
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
L3_102_034G1_scaffold_270_1
Bacteroides fragilis, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

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comp(334..4431)
DNA (4098bp) protein (1366aa)
Two-component system sensor histidine kinase/response n=1 Tax=Bacteroides sp. D22 RepID=D7IZN4_9BACE
Response regulator {ECO:0000313|EMBL:KDS16780.1}; TaxID=1339286 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides.;" source="Bacteroides fragilis str. 3725 D9 ii.;"
two-component system sensor histidine kinase/response
L3_102_034G1_scaffold_270_2
Bacteroides ovatus, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(4627..5835)
DNA (1209bp) protein (403aa)
Glycosyl hydrolase, family 88 {ECO:0000313|EMBL:EFF53917.1}; EC=3.2.1.- {ECO:0000313|EMBL:EFF53917.1};; TaxID=702443 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides.;" source="Bacteroides ovatus SD CMC 3f.;"
Highly conserved protein containing a thioredoxin domain n=4 Tax=Bacteroides RepID=D6D6A3_9BACE
Highly conserved protein containing a thioredoxin domain
L3_102_034G1_scaffold_270_3
Bacteroides sp. 3_1_23, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(6093..6584)
DNA (492bp) protein (164aa)
Uncharacterized protein n=13 Tax=Bacteroides RepID=C3QH60_9BACE
hypothetical protein
Putative uncharacterized protein {ECO:0000313|EMBL:EFI36814.1}; TaxID=457390 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides.;" source="Bacteroides sp. 3_1_23.;"
L3_102_034G1_scaffold_270_4
Bacteroides ovatus CAG:22, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(6724..8127)
DNA (1404bp) protein (468aa)
asparaginyl-tRNA synthetase (EC:6.1.1.22)
Asparagine--tRNA ligase {ECO:0000256|HAMAP-Rule:MF_00534, ECO:0000256|SAAS:SAAS00089453}; EC=6.1.1.22 {ECO:0000256|HAMAP-Rule:MF_00534, ECO:0000256|SAAS:SAAS00089453};; Asparaginyl-tRNA synthetase {ECO:0000256|HAMAP-Rule:MF_00534}; TaxID=1263050 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides; environmental samples.;" source="Bacteroides ovatus CAG:22.;"
Asparagine--tRNA ligase n=12 Tax=Bacteroides RepID=D6D6A1_9BACE
L3_102_034G1_scaffold_270_5
Bacteroides sp. 1_1_30, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(8233..9720)
DNA (1488bp) protein (496aa)
Pseudouridine synthase {ECO:0000256|RuleBase:RU003887}; EC=5.4.99.- {ECO:0000256|RuleBase:RU003887};; TaxID=457387 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides.;" source="Bacteroides sp. 1_1_30.;"
ribosomal large subunit pseudouridine synthase B n=1 Tax=Bacteroides faecis RepID=UPI000262FBAF
ribosomal large subunit pseudouridine synthase B
L3_102_034G1_scaffold_270_6
Bacteroides sp. 1_1_30, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(9795..11141)
DNA (1347bp) protein (449aa)
Adenylosuccinate lyase (EC:4.3.2.2)
Adenylosuccinate lyase {ECO:0000256|RuleBase:RU361172}; Short=ASL {ECO:0000256|RuleBase:RU361172};; EC=4.3.2.2 {ECO:0000256|RuleBase:RU361172};; Adenylosuccinase {ECO:0000256|RuleBase:RU361172}; TaxID=457387 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides.;" source="Bacteroides sp. 1_1_30.;"
Adenylosuccinate lyase n=4 Tax=Bacteroides RepID=D6D6A0_9BACE
L3_102_034G1_scaffold_270_7
Bacteroides sp. 1_1_30, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(11780..12334)
DNA (555bp) protein (185aa)
Acetyltransferase (isoleucine patch superfamily) (EC:2.3.1.79)
Acetyltransferase (Isoleucine patch superfamily) n=3 Tax=Bacteroides RepID=D6D699_9BACE
Uncharacterized protein {ECO:0000313|EMBL:EGN06944.1}; TaxID=457387 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides.;" source="Bacteroides sp. 1_1_30.;"
L3_102_034G1_scaffold_270_8
Bacteroides sp. 1_1_30, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(12338..13111)
DNA (774bp) protein (258aa)
UPF0246 protein HMPREF0106_00611 n=1 Tax=Bacteroides sp. D22 RepID=D7IZM6_9BACE
UPF0246 protein HMPREF0127_01795 {ECO:0000256|HAMAP-Rule:MF_00652}; TaxID=457387 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides.;" source="Bacteroides sp. 1_1_30.;"
hypothetical protein
L3_102_034G1_scaffold_270_9
Bacteroides sp. D1, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(13355..16576)
DNA (3222bp) protein (1074aa)
Carbamoyl-phosphate synthase (glutamine-hydrolyzing) {ECO:0000256|SAAS:SAAS00086116}; EC=6.3.5.5 {ECO:0000256|SAAS:SAAS00086116};; TaxID=556258 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides.;" source="Bacteroides sp. D1.;"
carbamoyl-phosphate synthase large subunit (EC:6.3.5.5)
Carbamoyl-phosphate synthase large subunit n=7 Tax=Bacteroides RepID=D6D697_9BACE
L3_102_034G1_scaffold_270_10
Bacteroides xylanisolvens, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

17003..18097
DNA (1095bp) protein (365aa)
tryptophanyl-tRNA synthetase (EC:6.1.1.2)
Tryptophanyl-tRNA synthetase n=6 Tax=Bacteroides RepID=D6D696_9BACE
Tryptophan-tRNA ligase {ECO:0000313|EMBL:EIY88552.1}; TaxID=997892 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides.;" source="Bacteroides xylanisolvens CL03T12C04.;"
L3_102_034G1_scaffold_270_11
Bacteroides xylanisolvens, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(18192..20606)
DNA (2415bp) protein (805aa)
Predicted membrane protein (DUF2339) n=1 Tax=Bacteroides xylanisolvens XB1A RepID=D6D695_9BACE
Predicted membrane protein (DUF2339) {ECO:0000313|EMBL:CBK69598.1}; TaxID=657309 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides.;" source="Bacteroides xylanisolvens XB1A.;"
Predicted membrane protein (DUF2339).
L3_102_034G1_scaffold_270_12
Bacteroides xylanisolvens, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

20888..21346
DNA (459bp) protein (153aa)
Putative uncharacterized protein n=1 Tax=Bacteroides xylanisolvens XB1A RepID=D6D694_9BACE
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:CBK69597.1}; TaxID=657309 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides.;" source="Bacteroides xylanisolvens XB1A.;"
L3_102_034G1_scaffold_270_13
Bacteroides xylanisolvens, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

21384..22085
DNA (702bp) protein (234aa)
Putative uncharacterized protein n=1 Tax=Bacteroides xylanisolvens XB1A RepID=D6D693_9BACE
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:CBK69596.1}; TaxID=657309 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides.;" source="Bacteroides xylanisolvens XB1A.;"
L3_102_034G1_scaffold_270_14
Bacteroides sp. D22, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

22244..22483
DNA (240bp) protein (80aa)
DNA-binding protein n=1 Tax=Bacteroides sp. D22 RepID=D7IZM1_9BACE
DNA-binding protein {ECO:0000313|EMBL:EFI15024.1}; TaxID=585544 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides.;" source="Bacteroides sp. D22.;"
hypothetical protein
L3_102_034G1_scaffold_270_15
Bacteroides xylanisolvens, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(22646..23833)
DNA (1188bp) protein (396aa)
OmpA family protein n=7 Tax=Bacteroides RepID=C3QH46_9BACE
Uncharacterized protein {ECO:0000313|EMBL:EIY88547.1}; TaxID=997892 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides.;" source="Bacteroides xylanisolvens CL03T12C04.;"
Outer membrane protein and related peptidoglycan-associated (lipo)proteins
L3_102_034G1_scaffold_270_16
Bacteroides sp. D22, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(23937..25838)
DNA (1902bp) protein (634aa)
DNA mismatch repair protein MutL n=1 Tax=Bacteroides sp. D22 RepID=D7IZL9_9BACE
DNA mismatch repair protein MutL {ECO:0000256|HAMAP-Rule:MF_00149, ECO:0000256|SAAS:SAAS00058680}; TaxID=585544 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides.;" source="Bacteroides sp. D22.;"
DNA mismatch repair protein MutL
L3_102_034G1_scaffold_270_17
Bacteroides sp. D22, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(25856..26155)
DNA (300bp) protein (100aa)
Membrane protein n=1 Tax=Bacteroides sp. D22 RepID=D7IZL8_9BACE
Membrane protein {ECO:0000313|EMBL:EFI15021.1}; TaxID=585544 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides.;" source="Bacteroides sp. D22.;"
hypothetical protein
L3_102_034G1_scaffold_270_18
Bacteroides sp. D22, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(26157..27941)
DNA (1785bp) protein (595aa)
Putative uncharacterized protein n=1 Tax=Bacteroides sp. D22 RepID=D7IZL7_9BACE
Putative uncharacterized protein {ECO:0000313|EMBL:EFI15020.1}; TaxID=585544 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides.;" source="Bacteroides sp. D22.;"
hypothetical protein
L3_102_034G1_scaffold_270_19
Bacteroides sp. 1_1_30, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(27964..29346)
DNA (1383bp) protein (461aa)
Peptidylprolyl isomerase {ECO:0000256|SAAS:SAAS00143148}; EC=5.2.1.8 {ECO:0000256|SAAS:SAAS00143148};; TaxID=457387 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides.;" source="Bacteroides sp. 1_1_30.;"
Parvulin-like peptidyl-prolyl isomerase (EC:5.2.1.8)
Peptidyl-prolyl cis-trans isomerase, PPIC-type n=2 Tax=Bacteroides RepID=D7IZL6_9BACE
L3_102_034G1_scaffold_270_20
Bacteroides sp. D22, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(29356..30201)
DNA (846bp) protein (282aa)
Putative uncharacterized protein n=2 Tax=Bacteroides RepID=D6D686_9BACE
hypothetical protein
Putative uncharacterized protein {ECO:0000313|EMBL:EFI15018.1}; TaxID=585544 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides.;" source="Bacteroides sp. D22.;"
L3_102_034G1_scaffold_270_21
Bacteroides sp. D22, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(30256..31800)
DNA (1545bp) protein (515aa)
Peptidyl-prolyl cis-trans isomerase n=2 Tax=Bacteroides RepID=D7IZL4_9BACE
Peptidyl-prolyl cis-trans isomerase {ECO:0000313|EMBL:EFI15017.1}; TaxID=585544 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides.;" source="Bacteroides sp. D22.;"
PPIC-type PPIASE domain.
L3_102_034G1_scaffold_270_22
Bacteroides sp. D22, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(31943..33421)
DNA (1479bp) protein (493aa)
inosine-5'-monophosphate dehydrogenase (EC:1.1.1.205)
Inosine-5'-monophosphate dehydrogenase {ECO:0000256|HAMAP-Rule:MF_01964, ECO:0000256|RuleBase:RU003928}; Short=IMP dehydrogenase {ECO:0000256|HAMAP-Rule:MF_01964};; Short=IMPD {ECO:0000256|HAMAP-Rule:MF_01964};; Short=IMPDH {ECO:0000256|HAMAP-Rule:MF_01964};; EC=1.1.1.205 {ECO:0000256|HAMAP-Rule:MF_01964, ECO:0000256|RuleBase:RU003928};; TaxID=585544 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides.;" source="Bacteroides sp. D22.;"
Inosine-5'-monophosphate dehydrogenase n=1 Tax=Bacteroides sp. D22 RepID=D7IZL3_9BACE
L3_102_034G1_scaffold_270_23
Bacteroides sp. D22, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(33508..35688)
DNA (2181bp) protein (727aa)
ATP-dependent DNA helicase RecQ (EC:3.6.1.-)
ATP-dependent DNA helicase RecQ n=1 Tax=Bacteroides sp. D22 RepID=D7IZL2_9BACE
ATP-dependent DNA helicase RecQ {ECO:0000313|EMBL:EFI15015.1}; TaxID=585544 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides.;" source="Bacteroides sp. D22.;"
L3_102_034G1_scaffold_270_24
Bacteroides sp. 1_1_30, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(35856..37100)
DNA (1245bp) protein (415aa)
ATP-dependent Clp protease ATP-binding subunit ClpX (EC:3.4.21.92)
ATP-dependent Clp protease ATP-binding subunit ClpX n=2 Tax=Bacteroides RepID=D7IZL1_9BACE
ATP-dependent Clp protease ATP-binding subunit ClpX {ECO:0000256|HAMAP-Rule:MF_00175, ECO:0000256|SAAS:SAAS00063387}; TaxID=457387 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides.;" source="Bacteroides sp. 1_1_30.;"
L3_102_034G1_scaffold_270_25
Bacteroides sp. 1_1_14, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(37103..37765)
DNA (663bp) protein (221aa)
ATP-dependent Clp protease proteolytic subunit ClpP (EC:3.4.21.92)
ATP-dependent Clp protease proteolytic subunit {ECO:0000256|HAMAP-Rule:MF_00444, ECO:0000256|RuleBase:RU003567}; EC=3.4.21.92 {ECO:0000256|HAMAP-Rule:MF_00444};; Endopeptidase Clp {ECO:0000256|HAMAP-Rule:MF_00444}; TaxID=469585 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides.;" source="Bacteroides sp. 1_1_14.;"
ATP-dependent Clp protease proteolytic subunit n=25 Tax=Bacteroides RepID=CLPP_BACTN
L3_102_034G1_scaffold_270_26
Bacteroides sp. D22, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(37909..39264)
DNA (1356bp) protein (452aa)
Trigger factor n=1 Tax=Bacteroides sp. D22 RepID=D7IZK9_9BACE
Trigger factor {ECO:0000313|EMBL:EFI15012.1}; TaxID=585544 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides.;" source="Bacteroides sp. D22.;"
trigger factor
L3_102_034G1_scaffold_270_27
Bacteroides ovatus, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

39939..40184
DNA (246bp) protein (82aa)
RNA-binding proteins (RRM domain) n=23 Tax=Bacteroides RepID=D6D678_9BACE
RNA-binding protein rbpA
RNA recognition motif family protein {ECO:0000313|EMBL:KDS11399.1}; TaxID=1339346 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides.;" source="Bacteroides ovatus str. 3725 D1 iv.;"
L3_102_034G1_scaffold_270_28
Bacteroides sp. 1_1_30, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(40250..41020)
DNA (771bp) protein (257aa)
ABC-type transport system involved in resistance to organic solvents, ATPase component n=10 Tax=Bacteroides RepID=D6D677_9BACE
ABC-type transport system involved in resistance to organic solvents, ATPase component
Uncharacterized protein {ECO:0000313|EMBL:EGN06923.1}; TaxID=457387 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides.;" source="Bacteroides sp. 1_1_30.;"
L3_102_034G1_scaffold_270_29
Bacteroides sp. D22, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(41017..41760)
DNA (744bp) protein (248aa)
ABC transporter permease n=1 Tax=Bacteroides thetaiotaomicron dnLKV9 RepID=R9H994_BACT4
Membrane protein {ECO:0000313|EMBL:EFI15009.1}; TaxID=585544 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides.;" source="Bacteroides sp. D22.;"
hypothetical protein
L3_102_034G1_scaffold_270_30
Bacteroides xylanisolvens, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

41836..42597
DNA (762bp) protein (254aa)
ABC-type (unclassified) transport system, ATPase component (EC:3.6.3.-)
ABC-type (Unclassified) transport system, ATPase component n=11 Tax=Bacteroides RepID=D6D675_9BACE
Uncharacterized protein {ECO:0000313|EMBL:EIY88532.1}; TaxID=997892 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides.;" source="Bacteroides xylanisolvens CL03T12C04.;"
Displaying items 1-30 of 35 in total

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