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L3_102_034G1_scaffold_308

Search features with annotation key words

Displaying items 1-30 of 56 in total
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
L3_102_034G1_scaffold_308_1
Parabacteroides gordonii, Parabacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

162..746
DNA (585bp) protein (195aa)
Clindamycin resistance transfer factor BtgA n=1 Tax=Bacteroides fragilis (strain YCH46) RepID=Q64YN3_BACFR
Uncharacterized protein {ECO:0000313|EMBL:KKB49454.1}; TaxID=1203610 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Porphyromonadaceae; Parabacteroides.;" source="Parabacteroides gordonii MS-1.;"
clindamycin resistance transfer factor BtgA
L3_102_034G1_scaffold_308_2
Parabacteroides gordonii, Parabacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

751..1716
DNA (966bp) protein (322aa)
Uncharacterized protein n=1 Tax=Bacteroides fragilis CAG:558 RepID=R5S3K9_9BACE
Uncharacterized protein {ECO:0000313|EMBL:KKB49453.1}; TaxID=1203610 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Porphyromonadaceae; Parabacteroides.;" source="Parabacteroides gordonii MS-1.;"
mobB; mobilisation protein B
L3_102_034G1_scaffold_308_3
Parabacteroides gordonii, Parabacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

1713..1814
DNA (102bp) protein (34aa)
Uncharacterized protein {ECO:0000313|EMBL:KKB49452.1}; TaxID=1203610 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Porphyromonadaceae; Parabacteroides.;" source="Parabacteroides gordonii MS-1.;"
L3_102_034G1_scaffold_308_4
Parabacteroides gordonii, Parabacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

1839..3620
DNA (1782bp) protein (594aa)
hypothetical protein n=1 Tax=Cytophaga aurantiaca RepID=UPI00036EBB1F
Uncharacterized protein {ECO:0000313|EMBL:KKB49451.1}; TaxID=1203610 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Porphyromonadaceae; Parabacteroides.;" source="Parabacteroides gordonii MS-1.;"
KAP P-loop domain-containing protein
L3_102_034G1_scaffold_308_5
Parabacteroides gordonii, Parabacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

3620..4354
DNA (735bp) protein (245aa)
Uncharacterized protein n=1 Tax=Pedobacter saltans (strain ATCC 51119 / DSM 12145 / JCM 21818 / LMG 10337 / NBRC 100064 / NCIMB 13643) RepID=F0SEA7_PEDSD
Uncharacterized protein {ECO:0000313|EMBL:KKB49449.1}; TaxID=1203610 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Porphyromonadaceae; Parabacteroides.;" source="Parabacteroides gordonii MS-1.;"
hypothetical protein
L3_102_034G1_scaffold_308_6
Parabacteroides gordonii, Parabacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

4329..5675
DNA (1347bp) protein (449aa)
Uncharacterized protein n=1 Tax=Pedobacter saltans (strain ATCC 51119 / DSM 12145 / JCM 21818 / LMG 10337 / NBRC 100064 / NCIMB 13643) RepID=F0SEA6_PEDSD
Uncharacterized protein {ECO:0000313|EMBL:KKB49448.1}; TaxID=1203610 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Porphyromonadaceae; Parabacteroides.;" source="Parabacteroides gordonii MS-1.;"
hypothetical protein
L3_102_034G1_scaffold_308_7
Parabacteroides gordonii, Parabacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

5672..6382
DNA (711bp) protein (237aa)
Uncharacterized protein n=1 Tax=Prevotella pallens ATCC 700821 RepID=F9DJH3_9BACT
TatD family hydrolase {ECO:0000313|EMBL:KKB49447.1}; TaxID=1203610 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Porphyromonadaceae; Parabacteroides.;" source="Parabacteroides gordonii MS-1.;"
TatD-related deoxyribonuclease
L3_102_034G1_scaffold_308_8
Parabacteroides distasonis, Parabacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(6803..7636)
DNA (834bp) protein (278aa)
Methyltransferase, TIGR00027 family n=2 Tax=Parabacteroides RepID=E1YNL2_9PORP
Uncharacterized protein {ECO:0000313|EMBL:EKN23137.1}; TaxID=999417 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Porphyromonadaceae; Parabacteroides.;" source="Parabacteroides distasonis CL09T03C24.;"
O-methyltransferase domain-containing protein
L3_102_034G1_scaffold_308_9
Parabacteroides sp. 20_3, Parabacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

7738..8742
DNA (1005bp) protein (335aa)
Transcriptional regulator, AraC family n=2 Tax=Parabacteroides RepID=E1YNL3_9PORP
Transcriptional regulator, AraC family {ECO:0000313|EMBL:EFK64781.1}; TaxID=469591 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Porphyromonadaceae; Parabacteroides.;" source="Parabacteroides sp. 20_3.;"
putative AraC family transcriptional regulatory protein
L3_102_034G1_scaffold_308_10
Bacteroides sp. 2_1_33B, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(8759..11047)
DNA (2289bp) protein (763aa)
TonB-dependent receptor n=3 Tax=Bacteroidales RepID=D0TE34_9BACE
TonB-dependent receptor {ECO:0000313|EMBL:EEY83559.1}; TaxID=469589 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides.;" source="Bacteroides sp. 2_1_33B.;"
hypothetical protein
L3_102_034G1_scaffold_308_11
Parabacteroides sp. 20_3, Parabacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

11229..12467
DNA (1239bp) protein (413aa)
Transporter, major facilitator family protein n=2 Tax=Parabacteroides RepID=E1YNL6_9PORP
Transporter, major facilitator family protein {ECO:0000313|EMBL:EFK64784.1}; TaxID=469591 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Porphyromonadaceae; Parabacteroides.;" source="Parabacteroides sp. 20_3.;"
transporter
L3_102_034G1_scaffold_308_12
Parabacteroides distasonis, Parabacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(12531..13427)
DNA (897bp) protein (299aa)
Kinase, PfkB family n=2 Tax=Parabacteroides RepID=E1YNL7_9PORP
Uncharacterized protein {ECO:0000313|EMBL:EKN23142.1}; TaxID=999417 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Porphyromonadaceae; Parabacteroides.;" source="Parabacteroides distasonis CL09T03C24.;"
ribokinase
L3_102_034G1_scaffold_308_13
Parabacteroides distasonis, Parabacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

14172..16997
DNA (2826bp) protein (942aa)
Uncharacterized protein n=2 Tax=Parabacteroides RepID=K6B513_9PORP
Uncharacterized protein {ECO:0000313|EMBL:EKN23143.1}; TaxID=999417 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Porphyromonadaceae; Parabacteroides.;" source="Parabacteroides distasonis CL09T03C24.;"
hypothetical protein
L3_102_034G1_scaffold_308_14
Parabacteroides distasonis, Parabacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

17276..19462
DNA (2187bp) protein (729aa)
Uncharacterized protein n=2 Tax=Parabacteroides RepID=E1YNL9_9PORP
Uncharacterized protein {ECO:0000313|EMBL:EKN23144.1}; TaxID=999417 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Porphyromonadaceae; Parabacteroides.;" source="Parabacteroides distasonis CL09T03C24.;"
hypothetical protein
L3_102_034G1_scaffold_308_15
Parabacteroides sp. D13, Parabacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(19457..20740)
DNA (1284bp) protein (428aa)
UDP-N-acetylmuramoyl-tripeptide--D-alanyl-D-alanine ligase {ECO:0000256|RuleBase:RU004136}; EC=6.3.2.10 {ECO:0000256|RuleBase:RU004136};; TaxID=563193 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Porphyromonadaceae; Parabacteroides.;" source="Parabacteroides sp. D13.;"
UDP-N-acetylmuramoyl-tripeptide--D-alanyl-D-alanine ligase n=1 Tax=Parabacteroides sp. D13 RepID=C7X515_9PORP
UDP-N-acetylmuramoyl-tripeptide--D-alanyl-D-alanine ligase
L3_102_034G1_scaffold_308_16
Bacteroides sp. 3_1_19, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

20870..21709
DNA (840bp) protein (280aa)
Dihydropteroate synthase n=2 Tax=Bacteroides RepID=D0TE28_9BACE
Dihydropteroate synthase {ECO:0000313|EMBL:EFI10329.1}; TaxID=469592 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides.;" source="Bacteroides sp. 3_1_19.;"
dihydropteroate synthase
L3_102_034G1_scaffold_308_17
Parabacteroides sp. D25, Parabacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

21750..22529
DNA (780bp) protein (260aa)
TIGR00159 family protein n=2 Tax=Bacteroidales RepID=K6B6U6_9PORP
TIGR00159 family protein {ECO:0000313|EMBL:EKN31796.1}; TaxID=658661 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Porphyromonadaceae; Parabacteroides.;" source="Parabacteroides sp. D25.;"
hypothetical protein
L3_102_034G1_scaffold_308_18
Parabacteroides distasonis, Parabacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

22657..23670
DNA (1014bp) protein (338aa)
Phosphate acetyltransferase {ECO:0000313|EMBL:KDS66255.1}; EC=2.3.1.8 {ECO:0000313|EMBL:KDS66255.1};; TaxID=1339344 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Porphyromonadaceae; Parabacteroides.;" source="Parabacteroides distasonis str. 3999B T(B) 4.;"
Phosphate acetyltransferase n=3 Tax=Bacteroidales RepID=D0TE26_9BACE
phosphotransacetylase/phosphate acetyltransferase
L3_102_034G1_scaffold_308_19
Bacteroides sp. 2_1_33B, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

23696..24898
DNA (1203bp) protein (401aa)
Acetate kinase {ECO:0000256|HAMAP-Rule:MF_00020}; EC=2.7.2.1 {ECO:0000256|HAMAP-Rule:MF_00020};; Acetokinase {ECO:0000256|HAMAP-Rule:MF_00020}; TaxID=469589 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides.;" source="Bacteroides sp. 2_1_33B.;"
Acetate kinase n=1 Tax=Bacteroides sp. 2_1_33B RepID=D0TE25_9BACE
acetate kinase
L3_102_034G1_scaffold_308_20
Parabacteroides sp. 20_3, Parabacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

25056..25766
DNA (711bp) protein (237aa)
Uridylate kinase {ECO:0000256|HAMAP-Rule:MF_01220, ECO:0000256|SAAS:SAAS00197273}; Short=UK {ECO:0000256|HAMAP-Rule:MF_01220};; EC=2.7.4.22 {ECO:0000256|HAMAP-Rule:MF_01220, ECO:0000256|SAAS:SAAS00197270};; Uridine monophosphate kinase {ECO:0000256|HAMAP-Rule:MF_01220}; TaxID=469591 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Porphyromonadaceae; Parabacteroides.;" source="Parabacteroides sp. 20_3.;"
Uridylate kinase n=8 Tax=Bacteroidales RepID=D0TE24_9BACE
pyrH; uridylate kinase
L3_102_034G1_scaffold_308_21
Parabacteroides sp. D25, Parabacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

25922..28585
DNA (2664bp) protein (888aa)
Uncharacterized protein n=2 Tax=Bacteroidales RepID=K6B7G6_9PORP
Uncharacterized protein {ECO:0000313|EMBL:EKN31800.1}; TaxID=658661 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Porphyromonadaceae; Parabacteroides.;" source="Parabacteroides sp. D25.;"
two-component system sensor histidine kinase/response regulator
L3_102_034G1_scaffold_308_22
Parabacteroides sp. 20_3, Parabacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

28714..30522
DNA (1809bp) protein (603aa)
Fructan beta-fructosidase {ECO:0000313|EMBL:EFK64797.1}; EC=3.2.1.80 {ECO:0000313|EMBL:EFK64797.1};; TaxID=469591 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Porphyromonadaceae; Parabacteroides.;" source="Parabacteroides sp. 20_3.;"
Fructan beta-fructosidase n=2 Tax=Parabacteroides RepID=E1YNM9_9PORP
levanase
L3_102_034G1_scaffold_308_23
Parabacteroides distasonis, Parabacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

30541..31413
DNA (873bp) protein (291aa)
Kinase, PfkB family n=3 Tax=Bacteroidales RepID=D0TE21_9BACE
Uncharacterized protein {ECO:0000313|EMBL:EKN23155.1}; TaxID=999417 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Porphyromonadaceae; Parabacteroides.;" source="Parabacteroides distasonis CL09T03C24.;"
fructokinase
L3_102_034G1_scaffold_308_24
Parabacteroides distasonis, Parabacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

31417..32583
DNA (1167bp) protein (389aa)
Glucose/galactose transporter n=1 Tax=Parabacteroides distasonis (strain ATCC 8503 / DSM 20701 / NCTC 11152) RepID=A6LHB4_PARD8
Major Facilitator Superfamily protein {ECO:0000313|EMBL:KDS47145.1}; TaxID=1339341 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Porphyromonadaceae; Parabacteroides.;" source="Parabacteroides distasonis str. 3776 Po2 i.;"
glucose/galactose transporter
L3_102_034G1_scaffold_308_25
Parabacteroides sp. 20_3, Parabacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

32711..33274
DNA (564bp) protein (188aa)
Ribosome-recycling factor n=8 Tax=Bacteroidales RepID=RRF_PARD8
frr; ribosome recycling factor
Ribosome-recycling factor {ECO:0000256|HAMAP-Rule:MF_00040}; Short=RRF {ECO:0000256|HAMAP-Rule:MF_00040};; Ribosome-releasing factor {ECO:0000256|HAMAP-Rule:MF_00040}; TaxID=469591 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Porphyromonadaceae; Parabacteroides.;" source="Parabacteroides sp. 20_3.;"
L3_102_034G1_scaffold_308_26
Parabacteroides distasonis, Parabacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

33370..34302
DNA (933bp) protein (311aa)
Putative ribosome biogenesis GTPase RsgA {ECO:0000255|HAMAP-Rule:MF_01820}; EC=3.6.1.- {ECO:0000255|HAMAP-Rule:MF_01820};; TaxID=435591 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Porphyromonadaceae; Parabacteroides.;" source="Parabacteroides distasonis (strain ATCC 8503 / DSM 20701 / NCTC; 11152).;"
Putative ribosome biogenesis GTPase RsgA n=1 Tax=Parabacteroides distasonis (strain ATCC 8503 / DSM 20701 / NCTC 11152) RepID=RSGA_PARD8
ribosome-associated GTPase
L3_102_034G1_scaffold_308_27
Parabacteroides sp. 20_3, Parabacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(34318..35697)
DNA (1380bp) protein (460aa)
Putative dGTPase {ECO:0000313|EMBL:EFK64802.1}; EC=3.1.5.1 {ECO:0000313|EMBL:EFK64802.1};; TaxID=469591 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Porphyromonadaceae; Parabacteroides.;" source="Parabacteroides sp. 20_3.;"
dGTP triphosphohydrolase n=1 Tax=Parabacteroides distasonis (strain ATCC 8503 / DSM 20701 / NCTC 11152) RepID=A6LHB7_PARD8
dGTP triphosphohydrolase
L3_102_034G1_scaffold_308_28
Parabacteroides sp. D13, Parabacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

36046..39081
DNA (3036bp) protein (1012aa)
TonB-linked outer membrane protein, SusC/RagA family n=4 Tax=Bacteroidales RepID=C7X528_9PORP
TonB-linked outer membrane protein, SusC/RagA family {ECO:0000313|EMBL:EEU52998.1}; TaxID=563193 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Porphyromonadaceae; Parabacteroides.;" source="Parabacteroides sp. D13.;"
hypothetical protein
L3_102_034G1_scaffold_308_29
Parabacteroides sp. D13, Parabacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

39100..40752
DNA (1653bp) protein (551aa)
Uncharacterized protein n=1 Tax=Parabacteroides sp. D13 RepID=C7X529_9PORP
Uncharacterized protein {ECO:0000313|EMBL:EEU52999.1}; TaxID=563193 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Porphyromonadaceae; Parabacteroides.;" source="Parabacteroides sp. D13.;"
hypothetical protein
L3_102_034G1_scaffold_308_30
Parabacteroides sp. D13, Parabacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

40866..42377
DNA (1512bp) protein (504aa)
Glycosyl hydrolase family 2, sugar binding domain protein n=1 Tax=Parabacteroides sp. D13 RepID=C7X530_9PORP
Glycosyl hydrolase family 2, sugar binding domain protein {ECO:0000313|EMBL:EEU53000.1}; TaxID=563193 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Porphyromonadaceae; Parabacteroides.;" source="Parabacteroides sp. D13.;"
beta-glycosidase
Displaying items 1-30 of 56 in total

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