ggKbase home page

L3_102_034G1_scaffold_355

Search features with annotation key words

Displaying items 1-30 of 46 in total
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
L3_102_034G1_scaffold_355_1
[Clostridium] bolteae, Lachnoclostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

297..569
DNA (273bp) protein (91aa)
Uncharacterized protein n=1 Tax=Clostridium bolteae ATCC BAA-613 RepID=A8RZY3_9CLOT
Uncharacterized protein {ECO:0000313|EMBL:EDP14135.1}; TaxID=411902 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae.;" source="Clostridium bolteae (strain ATCC BAA-613 / WAL 16351).;"
prepilin peptidase
L3_102_034G1_scaffold_355_2
[Clostridium] bolteae, Lachnoclostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

611..1465
DNA (855bp) protein (285aa)
Uncharacterized protein n=1 Tax=Clostridium bolteae ATCC BAA-613 RepID=A8RZY5_9CLOT
Uncharacterized protein {ECO:0000313|EMBL:EDP14137.1}; TaxID=411902 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae.;" source="Clostridium bolteae (strain ATCC BAA-613 / WAL 16351).;"
SAF domain-containing protein
L3_102_034G1_scaffold_355_3
[Clostridium] bolteae, Lachnoclostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

1470..2294
DNA (825bp) protein (275aa)
Uncharacterized protein n=1 Tax=Clostridium bolteae ATCC BAA-613 RepID=A8RZY6_9CLOT
Uncharacterized protein {ECO:0000313|EMBL:EDP14138.1}; TaxID=411902 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae.;" source="Clostridium bolteae (strain ATCC BAA-613 / WAL 16351).;"
hypothetical protein
L3_102_034G1_scaffold_355_4
[Clostridium] bolteae, Lachnoclostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

2278..3645
DNA (1368bp) protein (456aa)
Uncharacterized protein n=1 Tax=Clostridium bolteae ATCC BAA-613 RepID=A8RZY7_9CLOT
Uncharacterized protein {ECO:0000313|EMBL:EDP14139.1}; TaxID=411902 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae.;" source="Clostridium bolteae (strain ATCC BAA-613 / WAL 16351).;"
type II secretion system protein E
L3_102_034G1_scaffold_355_5
[Clostridium] bolteae, Lachnoclostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

3647..4567
DNA (921bp) protein (307aa)
Uncharacterized protein n=1 Tax=Clostridium bolteae ATCC BAA-613 RepID=A8RZY8_9CLOT
Uncharacterized protein {ECO:0000313|EMBL:EDP14140.1}; TaxID=411902 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae.;" source="Clostridium bolteae (strain ATCC BAA-613 / WAL 16351).;"
hypothetical protein
L3_102_034G1_scaffold_355_6
Eubacterium plexicaudatum, Eubacterium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

4573..5451
DNA (879bp) protein (293aa)
Uncharacterized protein n=1 Tax=Eubacterium plexicaudatum ASF492 RepID=N1ZQY6_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:EMZ16483.1}; TaxID=1235802 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Eubacteriaceae; Eubacterium.;" source="Eubacterium plexicaudatum ASF492.;"
hypothetical protein
L3_102_034G1_scaffold_355_7
Hungatella hathewayi, Hungatella, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

5630..5863
DNA (234bp) protein (78aa)
Uncharacterized protein n=2 Tax=Clostridium hathewayi RepID=D3ABM5_9CLOT
Uncharacterized protein {ECO:0000313|EMBL:EFD00772.1}; TaxID=566550 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Hungatella.;" source="Hungatella hathewayi DSM 13479.;"
hypothetical protein
L3_102_034G1_scaffold_355_8
[Clostridium] bolteae, Lachnoclostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

5906..6253
DNA (348bp) protein (116aa)
Uncharacterized protein n=1 Tax=Clostridium bolteae ATCC BAA-613 RepID=A8RZZ3_9CLOT
Uncharacterized protein {ECO:0000313|EMBL:EDP14144.1}; TaxID=411902 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae.;" source="Clostridium bolteae (strain ATCC BAA-613 / WAL 16351).;"
L3_102_034G1_scaffold_355_9
unknown

Not on your lists

6256..6411
DNA (156bp) protein (52aa)

This feature has no annotations

L3_102_034G1_scaffold_355_10
[Clostridium] bolteae, Lachnoclostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

6401..6811
DNA (411bp) protein (137aa)
Uncharacterized protein n=1 Tax=Clostridium bolteae ATCC BAA-613 RepID=A8RZZ6_9CLOT
Uncharacterized protein {ECO:0000313|EMBL:EDP14146.1}; TaxID=411902 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae.;" source="Clostridium bolteae (strain ATCC BAA-613 / WAL 16351).;"
Protein of unknown function (DUF3268).
L3_102_034G1_scaffold_355_11
[Clostridium] bolteae, Lachnoclostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

6833..7408
DNA (576bp) protein (192aa)
Uncharacterized protein n=1 Tax=Clostridium bolteae ATCC BAA-613 RepID=A8RZZ7_9CLOT
Uncharacterized protein {ECO:0000313|EMBL:EDP14148.1}; TaxID=411902 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae.;" source="Clostridium bolteae (strain ATCC BAA-613 / WAL 16351).;"
L3_102_034G1_scaffold_355_12
[Clostridium] bolteae, Lachnoclostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

7420..8034
DNA (615bp) protein (205aa)
Uncharacterized protein n=1 Tax=Clostridium bolteae ATCC BAA-613 RepID=A8RZZ8_9CLOT
Uncharacterized protein {ECO:0000313|EMBL:EDP14149.1}; TaxID=411902 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae.;" source="Clostridium bolteae (strain ATCC BAA-613 / WAL 16351).;"
L3_102_034G1_scaffold_355_13
unknown

Not on your lists

8045..8488
DNA (444bp) protein (148aa)

This feature has no annotations

L3_102_034G1_scaffold_355_14
[Clostridium] bolteae, Lachnoclostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

8691..9113
DNA (423bp) protein (141aa)
Single-stranded DNA-binding protein n=1 Tax=Clostridium bolteae ATCC BAA-613 RepID=A8S001_9CLOT
Uncharacterized protein {ECO:0000313|EMBL:EDP14151.1}; TaxID=411902 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae.;" source="Clostridium bolteae (strain ATCC BAA-613 / WAL 16351).;"
L3_102_034G1_scaffold_355_15
[Clostridium] bolteae, Lachnoclostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

9209..10084
DNA (876bp) protein (292aa)
Uncharacterized protein n=1 Tax=Clostridium bolteae ATCC BAA-613 RepID=A8S002_9CLOT
Uncharacterized protein {ECO:0000313|EMBL:EDP14152.1}; TaxID=411902 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae.;" source="Clostridium bolteae (strain ATCC BAA-613 / WAL 16351).;"
hypothetical protein
L3_102_034G1_scaffold_355_16
[Clostridium] bolteae, Lachnoclostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

10103..11899
DNA (1797bp) protein (599aa)
Uncharacterized protein n=1 Tax=Clostridium bolteae ATCC BAA-613 RepID=A8S003_9CLOT
Uncharacterized protein {ECO:0000313|EMBL:EDP14153.1}; TaxID=411902 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae.;" source="Clostridium bolteae (strain ATCC BAA-613 / WAL 16351).;"
MoxR-like ATPases
L3_102_034G1_scaffold_355_17
Blautia hansenii, Blautia, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

11916..12161
DNA (246bp) protein (82aa)
DNA-binding helix-turn-helix protein n=2 Tax=Blautia RepID=A7B1L2_RUMGN
DNA-binding helix-turn-helix protein {ECO:0000313|EMBL:EEX20266.1}; TaxID=537007 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Blautia.;" source="Blautia hansenii DSM 20583.;"
L3_102_034G1_scaffold_355_18
[Clostridium] bolteae, Lachnoclostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

12164..14257
DNA (2094bp) protein (698aa)
Uncharacterized protein n=1 Tax=Clostridium bolteae ATCC BAA-613 RepID=A8S006_9CLOT
Uncharacterized protein {ECO:0000313|EMBL:EDP14155.1}; TaxID=411902 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae.;" source="Clostridium bolteae (strain ATCC BAA-613 / WAL 16351).;"
Nitric oxide reductase activation protein
L3_102_034G1_scaffold_355_19
[Clostridium] bolteae, Lachnoclostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

14275..14943
DNA (669bp) protein (223aa)
Uncharacterized protein n=1 Tax=Clostridium bolteae ATCC BAA-613 RepID=A8S007_9CLOT
Uncharacterized protein {ECO:0000313|EMBL:EDP14156.1}; TaxID=411902 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae.;" source="Clostridium bolteae (strain ATCC BAA-613 / WAL 16351).;"
hypothetical protein
L3_102_034G1_scaffold_355_20
Clostridium tetanomorphum, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

15021..15554
DNA (534bp) protein (178aa)
Sporulation protein 5T n=1 Tax=Clostridium stercorarium subsp. stercorarium (strain ATCC 35414 / DSM 8532 / NCIMB 11754) RepID=L7VV36_CLOSH
Stage V sporulation protein T {ECO:0000313|EMBL:KAJ50825.1}; TaxID=1230342 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium tetanomorphum DSM 665.;"
spoVT; stage V sporulation protein T
L3_102_034G1_scaffold_355_21
Clostridium sp. CAG:122, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

15579..16502
DNA (924bp) protein (308aa)
Uncharacterized protein n=1 Tax=Clostridium sp. CAG:122 RepID=R5RSH3_9CLOT
Uncharacterized protein {ECO:0000313|EMBL:CCZ41529.1}; TaxID=1262773 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium; environmental samples.;" source="Clostridium sp. CAG:122.;"
hypothetical protein
L3_102_034G1_scaffold_355_22
Marvinbryantia formatexigens, Marvinbryantia, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

16517..17062
DNA (546bp) protein (182aa)
RNA polymerase sigma factor, sigma-70 family n=1 Tax=Marvinbryantia formatexigens DSM 14469 RepID=C6LJX2_9FIRM
RNA polymerase sigma factor, sigma-70 family {ECO:0000313|EMBL:EET59050.1}; TaxID=478749 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Marvinbryantia.;" source="Marvinbryantia formatexigens DSM 14469.;"
RNA polymerase sigma factor, sigma-70 family
L3_102_034G1_scaffold_355_23
Lachnospiraceae bacterium M18-1, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

17080..18135
DNA (1056bp) protein (352aa)
Uncharacterized protein n=1 Tax=Lachnospiraceae bacterium M18-1 RepID=R9JW63_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:EOS38420.1}; TaxID=1235792 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae.;" source="Lachnospiraceae bacterium M18-1.;"
hypothetical protein
L3_102_034G1_scaffold_355_24
unknown

Not on your lists

18145..18411
DNA (267bp) protein (89aa)
Uncharacterized protein n=1 Tax=Clostridium bolteae ATCC BAA-613 RepID=A8S010_9CLOT
L3_102_034G1_scaffold_355_25
Hungatella hathewayi, Hungatella, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

18477..19013
DNA (537bp) protein (179aa)
Uncharacterized protein n=2 Tax=Clostridium hathewayi RepID=D3ABP7_9CLOT
Uncharacterized protein {ECO:0000313|EMBL:EFD00720.1}; TaxID=566550 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Hungatella.;" source="Hungatella hathewayi DSM 13479.;"
L3_102_034G1_scaffold_355_26
unknown

Not on your lists

19040..19579
DNA (540bp) protein (180aa)

This feature has no annotations

L3_102_034G1_scaffold_355_27
Dorea formicigenerans, Dorea, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

19576..21603
DNA (2028bp) protein (676aa)
DNA ligase {ECO:0000256|HAMAP-Rule:MF_01588}; EC=6.5.1.2 {ECO:0000256|HAMAP-Rule:MF_01588};; Polydeoxyribonucleotide synthase [NAD(+)] {ECO:0000256|HAMAP-Rule:MF_01588}; TaxID=411461 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Dorea.;" source="Dorea formicigenerans ATCC 27755.;"
DNA ligase, NAD-dependent (EC:6.5.1.2)
DNA ligase n=4 Tax=root RepID=B0G6B1_9FIRM
L3_102_034G1_scaffold_355_28
unknown

Not on your lists

21623..21733
DNA (111bp) protein (37aa)

This feature has no annotations

L3_102_034G1_scaffold_355_29
[Clostridium] citroniae, Lachnoclostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

22195..23550
DNA (1356bp) protein (452aa)
Putative uncharacterized protein n=1 Tax=Clostridium citroniae WAL-17108 RepID=G5HCA2_9CLOT
Uncharacterized protein {ECO:0000313|EMBL:EHF00982.1}; TaxID=742733 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae.;" source="[Clostridium] citroniae WAL-17108.;"
Predicted ATPase (AAA+ superfamily)
L3_102_034G1_scaffold_355_30
[Clostridium] bolteae, Lachnoclostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

23820..24041
DNA (222bp) protein (74aa)
Uncharacterized protein n=1 Tax=Clostridium bolteae ATCC BAA-613 RepID=A8S087_9CLOT
Uncharacterized protein {ECO:0000313|EMBL:EDP14222.1}; TaxID=411902 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae.;" source="Clostridium bolteae (strain ATCC BAA-613 / WAL 16351).;"
Displaying items 1-30 of 46 in total

View Taxonomy