ggKbase home page

L3_102_034G1_scaffold_383

Search features with annotation key words

Displaying items 1-30 of 44 in total
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
L3_102_034G1_scaffold_383_1
Parabacteroides distasonis, Parabacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

168..1481
DNA (1314bp) protein (438aa)
Putative NADH-dependent dyhydrogenase n=2 Tax=Parabacteroides RepID=A6LDL7_PARD8
NADH-dependent dyhydrogenase
Tat (Twin-arginine translocation) pathway signal sequence domain protein {ECO:0000313|EMBL:KDS65597.1}; TaxID=1339344 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Porphyromonadaceae; Parabacteroides.;" source="Parabacteroides distasonis str. 3999B T(B) 4.;"
L3_102_034G1_scaffold_383_2
Parabacteroides sp. D13, Parabacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(1594..3114)
DNA (1521bp) protein (507aa)
Uncharacterized protein n=1 Tax=Parabacteroides sp. D13 RepID=C7XCC5_9PORP
Uncharacterized protein {ECO:0000313|EMBL:EEU50475.1}; TaxID=563193 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Porphyromonadaceae; Parabacteroides.;" source="Parabacteroides sp. D13.;"
hypothetical protein
L3_102_034G1_scaffold_383_3
Bacteroides sp. 3_1_19, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

3290..5503
DNA (2214bp) protein (738aa)
GTP pyrophosphokinase n=1 Tax=Bacteroides sp. 3_1_19 RepID=D7IS01_9BACE
GTP pyrophosphokinase {ECO:0000313|EMBL:EFI08728.1}; TaxID=469592 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides.;" source="Bacteroides sp. 3_1_19.;"
GTP pyrophosphokinase
L3_102_034G1_scaffold_383_4
Parabacteroides distasonis, Parabacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(5633..7063)
DNA (1431bp) protein (477aa)
tRNA nucleotidyltransferase n=7 Tax=Bacteroidales RepID=A6LDM0_PARD8
tRNA nucleotidyltransferase
Uncharacterized protein {ECO:0000313|EMBL:EKN28716.1}; TaxID=999417 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Porphyromonadaceae; Parabacteroides.;" source="Parabacteroides distasonis CL09T03C24.;"
L3_102_034G1_scaffold_383_5
Parabacteroides sp. D25, Parabacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

7068..7976
DNA (909bp) protein (303aa)
Uncharacterized protein n=4 Tax=Parabacteroides RepID=C7XCC2_9PORP
Uncharacterized protein {ECO:0000313|EMBL:EKN30393.1}; TaxID=658661 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Porphyromonadaceae; Parabacteroides.;" source="Parabacteroides sp. D25.;"
lipoprotein
L3_102_034G1_scaffold_383_6
Parabacteroides distasonis, Parabacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(8085..10739)
DNA (2655bp) protein (885aa)
Uncharacterized protein n=2 Tax=Parabacteroides RepID=E1YYY9_9PORP
Uncharacterized protein {ECO:0000313|EMBL:EKN28714.1}; TaxID=999417 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Porphyromonadaceae; Parabacteroides.;" source="Parabacteroides distasonis CL09T03C24.;"
hypothetical protein
L3_102_034G1_scaffold_383_7
Parabacteroides distasonis, Parabacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(11006..11335)
DNA (330bp) protein (110aa)
Uncharacterized protein n=1 Tax=Parabacteroides distasonis CL03T12C09 RepID=K6AN60_9PORP
Uncharacterized protein {ECO:0000313|EMBL:EKN25030.1}; TaxID=999416 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Porphyromonadaceae; Parabacteroides.;" source="Parabacteroides distasonis CL03T12C09.;"
hypothetical protein
L3_102_034G1_scaffold_383_8
Parabacteroides distasonis, Parabacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(11828..12673)
DNA (846bp) protein (282aa)
Transporter, small conductance mechanosensitive ion channel (MscS) family n=7 Tax=Bacteroidales RepID=D7IRZ6_9BACE
transporter
Mechanosensitive ion channel family protein {ECO:0000313|EMBL:KDS50006.1}; TaxID=1339341 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Porphyromonadaceae; Parabacteroides.;" source="Parabacteroides distasonis str. 3776 Po2 i.;"
L3_102_034G1_scaffold_383_9
Parabacteroides distasonis, Parabacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

12833..13654
DNA (822bp) protein (274aa)
Tetratricopeptide repeat protein n=2 Tax=Parabacteroides RepID=E1YYZ2_9PORP
Uncharacterized protein {ECO:0000313|EMBL:EKN28711.1}; TaxID=999417 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Porphyromonadaceae; Parabacteroides.;" source="Parabacteroides distasonis CL09T03C24.;"
hypothetical protein
L3_102_034G1_scaffold_383_10
Parabacteroides distasonis, Parabacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(13787..14848)
DNA (1062bp) protein (354aa)
3-isopropylmalate dehydrogenase {ECO:0000256|HAMAP-Rule:MF_01033, ECO:0000256|RuleBase:RU004445}; EC=1.1.1.85 {ECO:0000256|HAMAP-Rule:MF_01033, ECO:0000256|RuleBase:RU004445};; 3-IPM-DH {ECO:0000256|HAMAP-Rule:MF_01033}; Beta-IPM dehydrogenase {ECO:0000256|HAMAP-Rule:MF_01033}; TaxID=1339341 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Porphyromonadaceae; Parabacteroides.;" source="Parabacteroides distasonis str. 3776 Po2 i.;"
3-isopropylmalate dehydrogenase n=8 Tax=Parabacteroides RepID=A6LDM6_PARD8
3-isopropylmalate dehydrogenase
L3_102_034G1_scaffold_383_11
Parabacteroides distasonis, Parabacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(14864..15307)
DNA (444bp) protein (148aa)
Methylglyoxal synthase {ECO:0000256|HAMAP-Rule:MF_00549, ECO:0000256|SAAS:SAAS00089917}; Short=MGS {ECO:0000256|HAMAP-Rule:MF_00549};; EC=4.2.3.3 {ECO:0000256|HAMAP-Rule:MF_00549, ECO:0000256|SAAS:SAAS00089921};; TaxID=999417 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Porphyromonadaceae; Parabacteroides.;" source="Parabacteroides distasonis CL09T03C24.;"
Methylglyoxal synthase n=9 Tax=Bacteroidales RepID=A6LDM7_PARD8
methylglyoxyl synthase
L3_102_034G1_scaffold_383_12
Bacteroides sp. 2_1_33B, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(15328..16842)
DNA (1515bp) protein (505aa)
LeuA allosteric (Dimerization) domain protein n=1 Tax=Bacteroides sp. 2_1_33B RepID=D0TGX4_9BACE
LeuA allosteric (Dimerization) domain protein {ECO:0000313|EMBL:EEY82378.1}; TaxID=469589 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides.;" source="Bacteroides sp. 2_1_33B.;"
2-isopropylmalate synthase
L3_102_034G1_scaffold_383_13
Parabacteroides sp. D13, Parabacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(16845..17432)
DNA (588bp) protein (196aa)
3-isopropylmalate dehydratase {ECO:0000256|SAAS:SAAS00089872}; EC=4.2.1.33 {ECO:0000256|SAAS:SAAS00089872};; TaxID=563193 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Porphyromonadaceae; Parabacteroides.;" source="Parabacteroides sp. D13.;"
3-isopropylmalate dehydratase small subunit LeuD n=8 Tax=Bacteroidales RepID=A6LDM9_PARD8
3-isopropylmalate dehydratase small subunit
L3_102_034G1_scaffold_383_14
Parabacteroides sp. 20_3, Parabacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(17459..18856)
DNA (1398bp) protein (466aa)
isopropylmalate isomerase large subunit (EC:4.2.1.33)
3-isopropylmalate dehydratase large subunit {ECO:0000256|SAAS:SAAS00091369}; EC=4.2.1.- {ECO:0000256|SAAS:SAAS00274346};; EC=4.2.1.33 {ECO:0000256|SAAS:SAAS00091399};; TaxID=469591 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Porphyromonadaceae; Parabacteroides.;" source="Parabacteroides sp. 20_3.;"
3-isopropylmalate dehydratase large subunit n=6 Tax=Bacteroidales RepID=A6LDN0_PARD8
L3_102_034G1_scaffold_383_15
Bacteroides sp. 3_1_19, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(18871..20373)
DNA (1503bp) protein (501aa)
2-isopropylmalate synthase {ECO:0000256|HAMAP-Rule:MF_01025, ECO:0000256|SAAS:SAAS00049060}; EC=2.3.3.13 {ECO:0000256|HAMAP-Rule:MF_01025, ECO:0000256|SAAS:SAAS00085331};; Alpha-IPM synthase {ECO:0000256|HAMAP-Rule:MF_01025}; Alpha-isopropylmalate synthase {ECO:0000256|HAMAP-Rule:MF_01025}; TaxID=469592 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides.;" source="Bacteroides sp. 3_1_19.;"
2-isopropylmalate synthase n=1 Tax=Bacteroides sp. 3_1_19 RepID=D7IRY9_9BACE
2-isopropylmalate synthase
L3_102_034G1_scaffold_383_16
Parabacteroides distasonis, Parabacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(20783..24262)
DNA (3480bp) protein (1160aa)
Uncharacterized protein n=2 Tax=Parabacteroides RepID=A6LDN2_PARD8
Uncharacterized protein {ECO:0000313|EMBL:ABR43796.1}; TaxID=435591 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Porphyromonadaceae; Parabacteroides.;" source="Parabacteroides distasonis (strain ATCC 8503 / DSM 20701 / NCTC; 11152).;"
hypothetical protein
L3_102_034G1_scaffold_383_17
Parabacteroides distasonis, Parabacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(24266..28801)
DNA (4536bp) protein (1512aa)
Putative internalin-related protein n=1 Tax=Parabacteroides distasonis (strain ATCC 8503 / DSM 20701 / NCTC 11152) RepID=A6LDN3_PARD8
Putative internalin-related protein {ECO:0000313|EMBL:ABR43797.1}; TaxID=435591 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Porphyromonadaceae; Parabacteroides.;" source="Parabacteroides distasonis (strain ATCC 8503 / DSM 20701 / NCTC; 11152).;"
internalin-like protein
L3_102_034G1_scaffold_383_18
Bacteroides sp. 2_1_33B, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

29424..29660
DNA (237bp) protein (79aa)
Uncharacterized protein n=1 Tax=Bacteroides sp. 2_1_33B RepID=D0TGY2_9BACE
Uncharacterized protein {ECO:0000313|EMBL:EEY82386.1}; TaxID=469589 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides.;" source="Bacteroides sp. 2_1_33B.;"
L3_102_034G1_scaffold_383_19
Parabacteroides distasonis, Parabacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

29627..30052
DNA (426bp) protein (142aa)
Uncharacterized protein n=2 Tax=Parabacteroides RepID=E1YZ03_9PORP
Uncharacterized protein {ECO:0000313|EMBL:EKN28700.1}; TaxID=999417 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Porphyromonadaceae; Parabacteroides.;" source="Parabacteroides distasonis CL09T03C24.;"
hypothetical protein
L3_102_034G1_scaffold_383_20
Bacteroides sp. 2_1_33B, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

29991..30224
DNA (234bp) protein (78aa)
Uncharacterized protein n=2 Tax=Bacteroides RepID=D0TGY4_9BACE
Uncharacterized protein {ECO:0000313|EMBL:EEY82388.1}; TaxID=469589 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides.;" source="Bacteroides sp. 2_1_33B.;"
L3_102_034G1_scaffold_383_21
Bacteroides sp. 2_1_33B, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

30194..30469
DNA (276bp) protein (92aa)
Uncharacterized protein n=1 Tax=Bacteroides sp. 2_1_33B RepID=D0TGY5_9BACE
Uncharacterized protein {ECO:0000313|EMBL:EEY82389.1}; TaxID=469589 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides.;" source="Bacteroides sp. 2_1_33B.;"
hypothetical protein
L3_102_034G1_scaffold_383_22
Parabacteroides sp. 20_3, Parabacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(30484..31527)
DNA (1044bp) protein (348aa)
Ketol-acid reductoisomerase {ECO:0000256|SAAS:SAAS00051427}; EC=1.1.1.86 {ECO:0000256|SAAS:SAAS00051427};; TaxID=469591 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Porphyromonadaceae; Parabacteroides.;" source="Parabacteroides sp. 20_3.;"
Ketol-acid reductoisomerase n=2 Tax=Parabacteroides RepID=E1YZ04_9PORP
ketol-acid reductoisomerase
L3_102_034G1_scaffold_383_23
Parabacteroides distasonis, Parabacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(31577..32302)
DNA (726bp) protein (242aa)
Acyl-ACP thioesterase n=4 Tax=Bacteroidales RepID=D0TGY7_9BACE
Uncharacterized protein {ECO:0000313|EMBL:EKN28698.1}; TaxID=999417 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Porphyromonadaceae; Parabacteroides.;" source="Parabacteroides distasonis CL09T03C24.;"
acyl-ACP thioesterase
L3_102_034G1_scaffold_383_24
Bacteroides sp. 3_1_19, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(32309..32863)
DNA (555bp) protein (185aa)
Acetolactate synthase, small subunit n=1 Tax=Bacteroides sp. 3_1_19 RepID=D7IRY4_9BACE
Acetolactate synthase, small subunit {ECO:0000313|EMBL:EFI08711.1}; TaxID=469592 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides.;" source="Bacteroides sp. 3_1_19.;"
acetohydroxyacid synthase small subunit
L3_102_034G1_scaffold_383_25
Parabacteroides distasonis, Parabacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(32879..34582)
DNA (1704bp) protein (568aa)
Acetolactate synthase, large subunit, biosynthetic type {ECO:0000313|EMBL:KDS49930.1}; EC=2.2.1.6 {ECO:0000313|EMBL:KDS49930.1};; TaxID=1339341 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Porphyromonadaceae; Parabacteroides.;" source="Parabacteroides distasonis str. 3776 Po2 i.;"
Acetolactate synthase, large subunit, biosynthetic type n=1 Tax=Bacteroides sp. 2_1_33B RepID=D0TGY9_9BACE
acetolactate synthase large subunit
L3_102_034G1_scaffold_383_26
Parabacteroides sp. D25, Parabacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(34616..36451)
DNA (1836bp) protein (612aa)
Dihydroxy-acid dehydratase {ECO:0000256|HAMAP-Rule:MF_00012, ECO:0000256|SAAS:SAAS00023040}; Short=DAD {ECO:0000256|HAMAP-Rule:MF_00012};; EC=4.2.1.9 {ECO:0000256|HAMAP-Rule:MF_00012, ECO:0000256|SAAS:SAAS00023040};; TaxID=658661 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Porphyromonadaceae; Parabacteroides.;" source="Parabacteroides sp. D25.;"
dihydroxy-acid dehydratase (EC:4.2.1.9)
Dihydroxy-acid dehydratase n=5 Tax=Parabacteroides RepID=ILVD_PARD8
L3_102_034G1_scaffold_383_27
Bacteroides sp. 2_1_33B, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

37582..38166
DNA (585bp) protein (195aa)
RNA polymerase sigma-70 factor n=1 Tax=Bacteroides sp. 2_1_33B RepID=D0TGZ1_9BACE
RNA polymerase sigma-70 factor {ECO:0000313|EMBL:EEY82395.1}; TaxID=469589 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides.;" source="Bacteroides sp. 2_1_33B.;"
RNA polymerase ECF-type sigma factor
L3_102_034G1_scaffold_383_28
Bacteroides sp. 2_1_33B, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

38240..39271
DNA (1032bp) protein (344aa)
Sigma factor regulatory protein, FecR/PupR family n=1 Tax=Bacteroides sp. 2_1_33B RepID=D0TGZ2_9BACE
Sigma factor regulatory protein, FecR/PupR family {ECO:0000313|EMBL:EEY82396.1}; TaxID=469589 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides.;" source="Bacteroides sp. 2_1_33B.;"
anti-sigma factor
L3_102_034G1_scaffold_383_29
Parabacteroides distasonis, Parabacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

39411..42911
DNA (3501bp) protein (1167aa)
TonB-linked outer membrane protein, SusC/RagA family n=3 Tax=Parabacteroides RepID=C7XCA2_9PORP
hypothetical protein
Putative outer membrane protein probably involved in nutrient binding {ECO:0000313|EMBL:ABR43807.1}; TaxID=435591 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Porphyromonadaceae; Parabacteroides.;" source="Parabacteroides distasonis (strain ATCC 8503 / DSM 20701 / NCTC; 11152).;"
L3_102_034G1_scaffold_383_30
Parabacteroides distasonis, Parabacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

42926..44755
DNA (1830bp) protein (610aa)
Putative outer membrane protein probably involved in nutrient binding n=1 Tax=Parabacteroides distasonis (strain ATCC 8503 / DSM 20701 / NCTC 11152) RepID=A6LDP4_PARD8
Putative outer membrane protein probably involved in nutrient binding {ECO:0000313|EMBL:ABR43808.1}; TaxID=435591 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Porphyromonadaceae; Parabacteroides.;" source="Parabacteroides distasonis (strain ATCC 8503 / DSM 20701 / NCTC; 11152).;"
hypothetical protein
Displaying items 1-30 of 44 in total

View Taxonomy