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L3_102_363G1_scaffold_68

Search features with annotation key words

Displaying items 1-30 of 69 in total
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
L3_102_363G1_scaffold_68_1
Bifidobacterium pseudocatenulatum, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(708..1724)
DNA (1017bp) protein (339aa)
Transcriptional regulator, LacI family n=1 Tax=Bifidobacterium pseudocatenulatum DSM 20438 = JCM 1200 RepID=C0BRN7_9BIFI
LacI family transcriptional regulator {ECO:0000313|EMBL:KEF29595.1}; TaxID=1454376 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium pseudocatenulatum IPLA36007.;"
LacI family transcriptional regulator
L3_102_363G1_scaffold_68_2
unknown

Not on your lists

1939..2049
DNA (111bp) protein (37aa)

This feature has no annotations

L3_102_363G1_scaffold_68_3
Bifidobacterium pseudocatenulatum, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

2062..4761
DNA (2700bp) protein (900aa)
Uncharacterized protein n=1 Tax=Bifidobacterium pseudocatenulatum CAG:263 RepID=R6P348_9BIFI
Alpha-glucosidase {ECO:0000313|EMBL:KEF29599.1}; TaxID=1454376 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium pseudocatenulatum IPLA36007.;"
alpha-glucosidase
L3_102_363G1_scaffold_68_4
Bifidobacterium pseudocatenulatum, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(4914..6419)
DNA (1506bp) protein (502aa)
Chain length determinant protein n=1 Tax=Bifidobacterium pseudocatenulatum DSM 20438 = JCM 1200 RepID=C0BRP2_9BIFI
Chain length determinant protein {ECO:0000313|EMBL:EEG71336.1}; TaxID=547043 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium pseudocatenulatum DSM 20438 = JCM 1200 = LMG 10505.;"
Etk-like tyrosine kinase
L3_102_363G1_scaffold_68_5
Bifidobacterium pseudocatenulatum, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(6535..7068)
DNA (534bp) protein (178aa)
Low molecular weight phosphotyrosine protein phosphatase n=1 Tax=Bifidobacterium pseudocatenulatum DSM 20438 = JCM 1200 RepID=C0BRP3_9BIFI
Low molecular weight phosphotyrosine protein phosphatase {ECO:0000313|EMBL:EEG71337.1}; TaxID=547043 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium pseudocatenulatum DSM 20438 = JCM 1200 = LMG 10505.;"
hypothetical protein
L3_102_363G1_scaffold_68_6
Bifidobacterium pseudocatenulatum, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(7195..7701)
DNA (507bp) protein (169aa)
Uncharacterized protein n=1 Tax=Bifidobacterium pseudocatenulatum DSM 20438 = JCM 1200 RepID=C0BRP4_9BIFI
Uncharacterized protein {ECO:0000313|EMBL:EEG71338.1}; TaxID=547043 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium pseudocatenulatum DSM 20438 = JCM 1200 = LMG 10505.;"
hypothetical protein
L3_102_363G1_scaffold_68_7
unknown

Not on your lists

7868..8029
DNA (162bp) protein (54aa)

This feature has no annotations

L3_102_363G1_scaffold_68_8
Bifidobacterium pseudocatenulatum CAG:263, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(7952..8152)
DNA (201bp) protein (67aa)
DNA-binding helix-turn-helix protein n=2 Tax=Bifidobacterium RepID=C0BRP5_9BIFI
Uncharacterized protein {ECO:0000313|EMBL:CDC15146.1}; TaxID=1263060 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium; environmental samples.;" source="Bifidobacterium pseudocatenulatum CAG:263.;"
transcriptional regulator
L3_102_363G1_scaffold_68_9
Bifidobacterium pseudocatenulatum, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(8142..8558)
DNA (417bp) protein (139aa)
Uncharacterized protein n=1 Tax=Bifidobacterium pseudocatenulatum DSM 20438 = JCM 1200 RepID=C0BRP6_9BIFI
Uncharacterized protein {ECO:0000313|EMBL:EEG71340.1}; TaxID=547043 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium pseudocatenulatum DSM 20438 = JCM 1200 = LMG 10505.;"
hypothetical protein
L3_102_363G1_scaffold_68_10
Bifidobacterium pseudocatenulatum CAG:263, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

9004..10581
DNA (1578bp) protein (526aa)
Alpha-amylase {ECO:0000256|RuleBase:RU361134}; EC=3.2.1.1 {ECO:0000256|RuleBase:RU361134};; TaxID=1263060 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium; environmental samples.;" source="Bifidobacterium pseudocatenulatum CAG:263.;"
Uncharacterized protein n=1 Tax=Bifidobacterium pseudocatenulatum CAG:263 RepID=R6NVB9_9BIFI
Alpha-amylase
L3_102_363G1_scaffold_68_11
Bifidobacterium pseudocatenulatum CAG:263, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

10578..13247
DNA (2670bp) protein (890aa)
Alpha-amylase {ECO:0000256|RuleBase:RU361134}; EC=3.2.1.1 {ECO:0000256|RuleBase:RU361134};; TaxID=1263060 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium; environmental samples.;" source="Bifidobacterium pseudocatenulatum CAG:263.;"
Alpha amylase, catalytic domain protein n=1 Tax=Bifidobacterium pseudocatenulatum DSM 20438 = JCM 1200 RepID=C0BRP7_9BIFI
Alpha-amylase
L3_102_363G1_scaffold_68_12
Bifidobacterium pseudocatenulatum, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(13252..13455)
DNA (204bp) protein (68aa)
Uncharacterized protein n=1 Tax=Bifidobacterium pseudocatenulatum DSM 20438 = JCM 1200 RepID=C0BRP8_9BIFI
Uncharacterized protein {ECO:0000313|EMBL:EEG71342.1}; TaxID=547043 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium pseudocatenulatum DSM 20438 = JCM 1200 = LMG 10505.;"
L3_102_363G1_scaffold_68_13
Bifidobacterium pseudocatenulatum, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

13776..14591
DNA (816bp) protein (272aa)
Uncharacterized protein n=2 Tax=Bifidobacterium RepID=C0BRP9_9BIFI
Uncharacterized protein {ECO:0000313|EMBL:EEG71343.1}; TaxID=547043 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium pseudocatenulatum DSM 20438 = JCM 1200 = LMG 10505.;"
hypothetical protein
L3_102_363G1_scaffold_68_14
Bifidobacterium pseudocatenulatum CAG:263, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

14603..15598
DNA (996bp) protein (332aa)
glycosyl transferase family 2 (EC:2.4.1.212)
Uncharacterized protein n=1 Tax=Bifidobacterium pseudocatenulatum CAG:263 RepID=R6P358_9BIFI
Uncharacterized protein {ECO:0000313|EMBL:CDC15154.1}; TaxID=1263060 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium; environmental samples.;" source="Bifidobacterium pseudocatenulatum CAG:263.;"
L3_102_363G1_scaffold_68_15
Bifidobacterium pseudocatenulatum CAG:263, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

15612..16988
DNA (1377bp) protein (459aa)
Uncharacterized protein n=1 Tax=Bifidobacterium pseudocatenulatum CAG:263 RepID=R6P9D4_9BIFI
Uncharacterized protein {ECO:0000313|EMBL:CDC15156.1}; TaxID=1263060 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium; environmental samples.;" source="Bifidobacterium pseudocatenulatum CAG:263.;"
L3_102_363G1_scaffold_68_16
Bifidobacterium pseudocatenulatum CAG:263, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

16981..18585
DNA (1605bp) protein (535aa)
Uncharacterized protein n=1 Tax=Bifidobacterium pseudocatenulatum CAG:263 RepID=R6NSL1_9BIFI
Uncharacterized protein {ECO:0000313|EMBL:CDC15158.1}; TaxID=1263060 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium; environmental samples.;" source="Bifidobacterium pseudocatenulatum CAG:263.;"
Membrane protein involved in the export of O-antigen and teichoic acid
L3_102_363G1_scaffold_68_17
Bifidobacterium pseudocatenulatum CAG:263, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

18582..19646
DNA (1065bp) protein (355aa)
putative glycosyl transferase (EC:2.4.1.-)
Uncharacterized protein n=1 Tax=Bifidobacterium pseudocatenulatum CAG:263 RepID=R6P361_9BIFI
Uncharacterized protein {ECO:0000313|EMBL:CDC15159.1}; TaxID=1263060 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium; environmental samples.;" source="Bifidobacterium pseudocatenulatum CAG:263.;"
L3_102_363G1_scaffold_68_18
Bifidobacterium pseudocatenulatum, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

19651..20697
DNA (1047bp) protein (349aa)
Nitroreductase family protein n=1 Tax=Bifidobacterium pseudocatenulatum DSM 20438 = JCM 1200 RepID=C0BRQ4_9BIFI
Nitroreductase family protein {ECO:0000313|EMBL:EEG71348.1}; Uncharacterized protein {ECO:0000313|EMBL:BAR04160.1}; TaxID=547043 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium pseudocatenulatum DSM 20438 = JCM 1200 = LMG 10505.;"
hypothetical protein
L3_102_363G1_scaffold_68_19
Bifidobacterium pseudocatenulatum CAG:263, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

20700..21800
DNA (1101bp) protein (367aa)
Glycosyltransferase, group 2 family protein n=2 Tax=Bifidobacterium RepID=C0BRQ5_9BIFI
Uncharacterized protein {ECO:0000313|EMBL:CDC15163.1}; TaxID=1263060 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium; environmental samples.;" source="Bifidobacterium pseudocatenulatum CAG:263.;"
glycosyltransferase like 2 family protein
L3_102_363G1_scaffold_68_20
Bifidobacterium pseudocatenulatum CAG:263, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

21865..23022
DNA (1158bp) protein (386aa)
Uncharacterized protein n=2 Tax=Bifidobacterium RepID=C0BRQ6_9BIFI
Uncharacterized protein {ECO:0000313|EMBL:CDC15164.1}; TaxID=1263060 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium; environmental samples.;" source="Bifidobacterium pseudocatenulatum CAG:263.;"
putative polysaccharide pyruvyl transferase
L3_102_363G1_scaffold_68_21
Bifidobacterium pseudocatenulatum, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(23151..24239)
DNA (1089bp) protein (363aa)
Alpha-amylase {ECO:0000256|RuleBase:RU361134}; EC=3.2.1.1 {ECO:0000256|RuleBase:RU361134};; TaxID=547043 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium pseudocatenulatum DSM 20438 = JCM 1200 = LMG 10505.;"
Alpha amylase, catalytic domain protein n=1 Tax=Bifidobacterium pseudocatenulatum DSM 20438 = JCM 1200 RepID=C0BRQ7_9BIFI
Alpha-amylase
L3_102_363G1_scaffold_68_22
Bifidobacterium pseudocatenulatum CAG:263, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(24193..26184)
DNA (1992bp) protein (664aa)
Alpha-amylase {ECO:0000256|RuleBase:RU361134}; EC=3.2.1.1 {ECO:0000256|RuleBase:RU361134};; TaxID=1263060 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium; environmental samples.;" source="Bifidobacterium pseudocatenulatum CAG:263.;"
Uncharacterized protein n=1 Tax=Bifidobacterium pseudocatenulatum CAG:263 RepID=R6NVD2_9BIFI
alpha amylase
L3_102_363G1_scaffold_68_23
Bifidobacterium pseudocatenulatum, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

26828..27328
DNA (501bp) protein (167aa)
Uncharacterized protein n=2 Tax=Bifidobacterium RepID=C0BRQ9_9BIFI
Uncharacterized protein {ECO:0000313|EMBL:EEG71353.1}; TaxID=547043 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium pseudocatenulatum DSM 20438 = JCM 1200 = LMG 10505.;"
hypothetical protein
L3_102_363G1_scaffold_68_24
Bifidobacterium pseudocatenulatum, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(27450..28448)
DNA (999bp) protein (333aa)
G5 domain protein n=2 Tax=Bifidobacterium RepID=C0BRR0_9BIFI
G5 domain protein {ECO:0000313|EMBL:EEG71354.1}; Uncharacterized protein {ECO:0000313|EMBL:BAR04155.1}; TaxID=547043 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium pseudocatenulatum DSM 20438 = JCM 1200 = LMG 10505.;"
hypothetical protein
L3_102_363G1_scaffold_68_25
Bifidobacterium pseudocatenulatum, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(28695..29060)
DNA (366bp) protein (122aa)
Thioredoxin n=2 Tax=Bifidobacterium RepID=C0BRR2_9BIFI
Thioredoxin {ECO:0000256|PIRNR:PIRNR000077}; TaxID=1454376 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium pseudocatenulatum IPLA36007.;"
thioredoxin
L3_102_363G1_scaffold_68_26
Bifidobacterium pseudocatenulatum, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

29251..29871
DNA (621bp) protein (207aa)
Uncharacterized protein n=1 Tax=Bifidobacterium pseudocatenulatum DSM 20438 = JCM 1200 RepID=C0BRR3_9BIFI
ADP-ribose pyrophosphatase {ECO:0000313|EMBL:KEF29605.1}; TaxID=1454376 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium pseudocatenulatum IPLA36007.;"
ADP-ribose pyrophosphatase
L3_102_363G1_scaffold_68_27
Bifidobacterium pseudocatenulatum CAG:263, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

30001..30849
DNA (849bp) protein (283aa)
Uncharacterized protein n=1 Tax=Bifidobacterium pseudocatenulatum CAG:263 RepID=R6NVD8_9BIFI
Uncharacterized protein {ECO:0000313|EMBL:CDC15170.1}; TaxID=1263060 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium; environmental samples.;" source="Bifidobacterium pseudocatenulatum CAG:263.;"
alpha/beta hydrolase
L3_102_363G1_scaffold_68_28
Bifidobacterium pseudocatenulatum CAG:263, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

30982..32070
DNA (1089bp) protein (363aa)
Uncharacterized protein n=1 Tax=Bifidobacterium pseudocatenulatum CAG:263 RepID=R6P9E6_9BIFI
Uncharacterized protein {ECO:0000313|EMBL:CDC15171.1}; TaxID=1263060 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium; environmental samples.;" source="Bifidobacterium pseudocatenulatum CAG:263.;"
NADH pyrophosphatase
L3_102_363G1_scaffold_68_29
Bifidobacterium pseudocatenulatum CAG:263, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

32126..32530
DNA (405bp) protein (135aa)
Glycine cleavage system H protein n=1 Tax=Bifidobacterium pseudocatenulatum CAG:263 RepID=R6PZN7_9BIFI
Glycine cleavage system H protein {ECO:0000256|HAMAP-Rule:MF_00272}; TaxID=1263060 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium; environmental samples.;" source="Bifidobacterium pseudocatenulatum CAG:263.;"
glycine cleavage system protein H
L3_102_363G1_scaffold_68_30
Bifidobacterium pseudocatenulatum, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

32640..33875
DNA (1236bp) protein (412aa)
Uncharacterized protein n=1 Tax=Bifidobacterium pseudocatenulatum DSM 20438 = JCM 1200 RepID=C0BRR8_9BIFI
ABC transporter ATP-binding protein {ECO:0000313|EMBL:KEF29609.1}; TaxID=1454376 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium pseudocatenulatum IPLA36007.;"
ABC transporter ATP-binding protein
Displaying items 1-30 of 69 in total

View Taxonomy