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L3_102_363G1_scaffold_73

Search features with annotation key words

Displaying items 1-30 of 93 in total
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
L3_102_363G1_scaffold_73_1
Ruminococcus gnavus CAG:126, Ruminococcus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

322..765
DNA (444bp) protein (148aa)
Uncharacterized protein n=1 Tax=Ruminococcus gnavus CAG:126 RepID=R5TQA2_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:CCZ67865.1}; TaxID=1263106 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminococcus; environmental samples.;" source="Ruminococcus gnavus CAG:126.;"
L3_102_363G1_scaffold_73_2
Lachnospiraceae bacterium 2_1_58FAA, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(916..1533)
DNA (618bp) protein (206aa)
Putative uncharacterized protein n=1 Tax=Lachnospiraceae bacterium 2_1_58FAA RepID=F7JZ97_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:EGN45931.1}; TaxID=658082 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae.;" source="Lachnospiraceae bacterium 2_1_58FAA.;"
hypothetical protein
L3_102_363G1_scaffold_73_3
Lachnospiraceae bacterium 2_1_58FAA, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(1475..1732)
DNA (258bp) protein (86aa)
Putative uncharacterized protein n=1 Tax=Lachnospiraceae bacterium 2_1_58FAA RepID=F7JZ98_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:EGN45932.1}; TaxID=658082 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae.;" source="Lachnospiraceae bacterium 2_1_58FAA.;"
L3_102_363G1_scaffold_73_4
Ruminococcus gnavus CAG:126, Ruminococcus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(1716..1967)
DNA (252bp) protein (84aa)
Sigma-70 region 4 n=2 Tax=Clostridiales RepID=R5TQ13_9FIRM
Sigma-70 region 4 {ECO:0000313|EMBL:CCZ67868.1}; TaxID=1263106 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminococcus; environmental samples.;" source="Ruminococcus gnavus CAG:126.;"
RNA polymerase sigma-70 factor
L3_102_363G1_scaffold_73_5
Lachnospiraceae bacterium 2_1_58FAA, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(2064..2267)
DNA (204bp) protein (68aa)
Uncharacterized protein n=2 Tax=Lachnospiraceae RepID=A7AZF1_RUMGN
Uncharacterized protein {ECO:0000313|EMBL:EGN45934.1}; TaxID=658082 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae.;" source="Lachnospiraceae bacterium 2_1_58FAA.;"
L3_102_363G1_scaffold_73_6
Lachnospiraceae bacterium 2_1_58FAA, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(2373..3080)
DNA (708bp) protein (236aa)
2-C-methyl-D-erythritol 4-phosphate cytidylyltransferase {ECO:0000256|HAMAP-Rule:MF_00108}; EC=2.7.7.60 {ECO:0000256|HAMAP-Rule:MF_00108};; 4-diphosphocytidyl-2C-methyl-D-erythritol synthase {ECO:0000256|HAMAP-Rule:MF_00108}; MEP cytidylyltransferase {ECO:0000256|HAMAP-Rule:MF_00108}; TaxID=658082 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae.;" source="Lachnospiraceae bacterium 2_1_58FAA.;"
2-C-methyl-D-erythritol 4-phosphate cytidylyltransferase (EC:2.7.7.60)
2-C-methyl-D-erythritol 4-phosphate cytidylyltransferase n=1 Tax=Lachnospiraceae bacterium 2_1_58FAA RepID=F7JZA1_9FIRM
L3_102_363G1_scaffold_73_7
[Ruminococcus] gnavus, Blautia, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists


comp(3086..4111)
DNA (1026bp) protein (342aa)
tRNA N6-adenosine threonylcarbamoyltransferase {ECO:0000256|HAMAP-Rule:MF_01445, ECO:0000256|SAAS:SAAS00018957}; EC=2.3.1.234 {ECO:0000256|HAMAP-Rule:MF_01445, ECO:0000256|SAAS:SAAS00182339};; N6-L-threonylcarbamoyladenine synthase {ECO:0000256|HAMAP-Rule:MF_01445}; t(6)A37 threonylcarbamoyladenosine biosynthesis protein TsaD {ECO:0000256|HAMAP-Rule:MF_01445}; tRNA threonylcarbamoyladenosine biosynthesis protein TsaD {ECO:0000256|HAMAP-Rule:MF_01445}; TaxID=411470 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Blautia.;" source="Ruminococcus gnavus ATCC 29149.;"
O-sialoglycoprotein endopeptidase (EC:3.4.24.57)
tRNA N6-adenosine threonylcarbamoyltransferase n=2 Tax=Lachnospiraceae RepID=A7AZF3_RUMGN
L3_102_363G1_scaffold_73_8
Lachnospiraceae bacterium 2_1_58FAA, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(4127..5032)
DNA (906bp) protein (302aa)
Ribonuclease Z {ECO:0000256|HAMAP-Rule:MF_01818}; Short=RNase Z {ECO:0000256|HAMAP-Rule:MF_01818};; EC=3.1.26.11 {ECO:0000256|HAMAP-Rule:MF_01818};; tRNA 3 endonuclease {ECO:0000256|HAMAP-Rule:MF_01818}; tRNase Z {ECO:0000256|HAMAP-Rule:MF_01818}; TaxID=658082 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae.;" source="Lachnospiraceae bacterium 2_1_58FAA.;"
RNAse Z (EC:3.1.26.11)
Ribonuclease Z n=2 Tax=Lachnospiraceae RepID=A7AZF4_RUMGN
L3_102_363G1_scaffold_73_9
Lachnospiraceae bacterium 2_1_58FAA, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(5034..5267)
DNA (234bp) protein (78aa)
Uncharacterized protein n=2 Tax=Lachnospiraceae RepID=A7AZF5_RUMGN
Uncharacterized protein {ECO:0000313|EMBL:EGN45938.1}; TaxID=658082 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae.;" source="Lachnospiraceae bacterium 2_1_58FAA.;"
hypothetical protein
L3_102_363G1_scaffold_73_10
[Ruminococcus] gnavus, Blautia, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(5398..6588)
DNA (1191bp) protein (397aa)
Ribosomal-protein-alanine acetyltransferase {ECO:0000313|EMBL:EDN78817.1}; EC=2.3.1.128 {ECO:0000313|EMBL:EDN78817.1};; TaxID=411470 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Blautia.;" source="Ruminococcus gnavus ATCC 29149.;"
Ribosomal-protein-alanine acetyltransferase n=1 Tax=Ruminococcus gnavus ATCC 29149 RepID=A7AZF6_RUMGN
Inactive homolog of metal-dependent proteases, putative molecular chaperone
L3_102_363G1_scaffold_73_11
Lachnospiraceae bacterium 2_1_58FAA, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(6664..7092)
DNA (429bp) protein (143aa)
Hydrolase, P-loop family n=3 Tax=Lachnospiraceae RepID=A7AZF7_RUMGN
Uncharacterized protein {ECO:0000313|EMBL:EGN45940.1}; TaxID=658082 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae.;" source="Lachnospiraceae bacterium 2_1_58FAA.;"
conserved hypothetical nucleotide-binding protein
L3_102_363G1_scaffold_73_12
Lachnospiraceae bacterium 2_1_58FAA, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(7199..8377)
DNA (1179bp) protein (393aa)
AICAR transformylase/IMP cyclohydrolase PurH (only IMP cyclohydrolase domain in Aful) (EC:2.1.2.3 3.5.4.10)
AICARFT/IMPCHase bienzyme n=2 Tax=Lachnospiraceae RepID=A7AZF9_RUMGN
Uncharacterized protein {ECO:0000313|EMBL:EGN45941.1}; TaxID=658082 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae.;" source="Lachnospiraceae bacterium 2_1_58FAA.;"
L3_102_363G1_scaffold_73_13
[Ruminococcus] gnavus, Blautia, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(8410..9123)
DNA (714bp) protein (238aa)
IMP cyclohydrolase-like protein n=3 Tax=Lachnospiraceae RepID=A7AZG0_RUMGN
IMP cyclohydrolase-like protein {ECO:0000313|EMBL:EDN78821.1}; TaxID=411470 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Blautia.;" source="Ruminococcus gnavus ATCC 29149.;"
IMP cyclohydrolase-like protein.
L3_102_363G1_scaffold_73_14
Ruminococcus gnavus CAG:126, Ruminococcus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(9255..10586)
DNA (1332bp) protein (444aa)
Uncharacterized protein n=1 Tax=Ruminococcus gnavus CAG:126 RepID=R5TQ24_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:CCZ67878.1}; TaxID=1263106 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminococcus; environmental samples.;" source="Ruminococcus gnavus CAG:126.;"
CBS/transporter associated domain-containing protein
L3_102_363G1_scaffold_73_15
[Ruminococcus] gnavus, Blautia, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(10653..12044)
DNA (1392bp) protein (464aa)
Uncharacterized protein n=1 Tax=Ruminococcus gnavus CC55_001C RepID=V8BRY3_RUMGN
Uncharacterized protein {ECO:0000313|EMBL:ETD17527.1}; TaxID=1073375 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Blautia.;" source="Ruminococcus gnavus CC55_001C.;"
hypothetical protein
L3_102_363G1_scaffold_73_16
Lachnospiraceae bacterium 2_1_58FAA, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(12082..12480)
DNA (399bp) protein (133aa)
Putative uncharacterized protein n=1 Tax=Lachnospiraceae bacterium 2_1_58FAA RepID=F7JZB1_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:EGN45945.1}; TaxID=658082 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae.;" source="Lachnospiraceae bacterium 2_1_58FAA.;"
GntR family transcriptional regulator
L3_102_363G1_scaffold_73_17
Lachnospiraceae bacterium 2_1_58FAA, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(12505..12738)
DNA (234bp) protein (78aa)
Uncharacterized protein n=4 Tax=Clostridiales RepID=A7AZG4_RUMGN
Uncharacterized protein {ECO:0000313|EMBL:EGN45946.1}; TaxID=658082 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae.;" source="Lachnospiraceae bacterium 2_1_58FAA.;"
hypothetical protein
L3_102_363G1_scaffold_73_18
[Ruminococcus] gnavus, Blautia, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(12832..13827)
DNA (996bp) protein (332aa)
L-asparaginase type II n=2 Tax=Clostridiales RepID=R5UGE5_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:ETD17524.1}; TaxID=1073375 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Blautia.;" source="Ruminococcus gnavus CC55_001C.;"
ans; asparaginase
L3_102_363G1_scaffold_73_19
Lachnospiraceae bacterium 2_1_58FAA, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(13922..14284)
DNA (363bp) protein (121aa)
Putative uncharacterized protein n=1 Tax=Lachnospiraceae bacterium 2_1_58FAA RepID=F7JZB5_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:EGN45775.1}; TaxID=658082 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae.;" source="Lachnospiraceae bacterium 2_1_58FAA.;"
L3_102_363G1_scaffold_73_20
Lachnospiraceae bacterium 2_1_58FAA, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(14425..15384)
DNA (960bp) protein (320aa)
Biotin synthase {ECO:0000256|HAMAP-Rule:MF_01694, ECO:0000256|SAAS:SAAS00009987}; EC=2.8.1.6 {ECO:0000256|HAMAP-Rule:MF_01694, ECO:0000256|SAAS:SAAS00250466};; TaxID=658082 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae.;" source="Lachnospiraceae bacterium 2_1_58FAA.;"
Biotin synthase n=1 Tax=Lachnospiraceae bacterium 2_1_58FAA RepID=F7JZB6_9FIRM
biotin synthetase
L3_102_363G1_scaffold_73_21
Lachnospiraceae bacterium 2_1_58FAA, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(15452..17557)
DNA (2106bp) protein (702aa)
Putative uncharacterized protein n=1 Tax=Lachnospiraceae bacterium 2_1_58FAA RepID=F7JZB7_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:EGN45777.1}; TaxID=658082 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae.;" source="Lachnospiraceae bacterium 2_1_58FAA.;"
ABC transporter permease
L3_102_363G1_scaffold_73_22
Lachnospiraceae bacterium 2_1_58FAA, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(17544..18299)
DNA (756bp) protein (252aa)
ABC transporter ATP-binding protein (EC:3.6.3.-)
Putative uncharacterized protein n=1 Tax=Lachnospiraceae bacterium 2_1_58FAA RepID=F7JZB8_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:EGN45778.1}; TaxID=658082 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae.;" source="Lachnospiraceae bacterium 2_1_58FAA.;"
L3_102_363G1_scaffold_73_23
Lachnospiraceae bacterium 2_1_58FAA, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

18443..19144
DNA (702bp) protein (234aa)
Putative uncharacterized protein n=1 Tax=Lachnospiraceae bacterium 2_1_58FAA RepID=F7JZB9_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:EGN45779.1}; TaxID=658082 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae.;" source="Lachnospiraceae bacterium 2_1_58FAA.;"
two-component response regulator
L3_102_363G1_scaffold_73_24
Lachnospiraceae bacterium 2_1_58FAA, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

19155..20447
DNA (1293bp) protein (431aa)
Putative uncharacterized protein n=1 Tax=Lachnospiraceae bacterium 2_1_58FAA RepID=F7JZC0_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:EGN45780.1}; TaxID=658082 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae.;" source="Lachnospiraceae bacterium 2_1_58FAA.;"
two-component sensor histidine kinase
L3_102_363G1_scaffold_73_25
Lachnospiraceae bacterium 2_1_58FAA, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(20514..21104)
DNA (591bp) protein (197aa)
Uncharacterized protein n=3 Tax=Clostridiales RepID=R5TQ33_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:EGN45781.1}; TaxID=658082 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae.;" source="Lachnospiraceae bacterium 2_1_58FAA.;"
XRE family transcriptional regulator
L3_102_363G1_scaffold_73_26
Lachnospiraceae bacterium COE1, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

21765..22814
DNA (1050bp) protein (350aa)
Uncharacterized protein n=2 Tax=Lachnospiraceae bacterium COE1 RepID=R9LBW6_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:EOS53232.1}; TaxID=1235793 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae.;" source="Lachnospiraceae bacterium COE1.;"
RNA-directed DNA polymerase
L3_102_363G1_scaffold_73_27
Lachnospiraceae bacterium COE1, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

22807..23439
DNA (633bp) protein (211aa)
Uncharacterized protein n=2 Tax=Lachnospiraceae bacterium COE1 RepID=R9LBW6_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:EOS53232.1}; TaxID=1235793 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae.;" source="Lachnospiraceae bacterium COE1.;"
RNA-directed DNA polymerase
L3_102_363G1_scaffold_73_28
Lachnospiraceae bacterium 2_1_58FAA, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(23388..24056)
DNA (669bp) protein (223aa)
Uncharacterized protein n=3 Tax=Clostridiales RepID=R5TQ33_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:EGN45781.1}; TaxID=658082 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae.;" source="Lachnospiraceae bacterium 2_1_58FAA.;"
XRE family transcriptional regulator
L3_102_363G1_scaffold_73_29
Ruminococcus gnavus CAG:126, Ruminococcus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

24241..25485
DNA (1245bp) protein (415aa)
Transporter major facilitator family protein n=2 Tax=Clostridiales RepID=R5TX26_9FIRM
Transporter major facilitator family protein {ECO:0000313|EMBL:CCZ67889.1}; TaxID=1263106 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminococcus; environmental samples.;" source="Ruminococcus gnavus CAG:126.;"
major facilitator transporter
L3_102_363G1_scaffold_73_30
Lachnospiraceae bacterium 2_1_58FAA, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(25516..26325)
DNA (810bp) protein (270aa)
Putative uncharacterized protein n=1 Tax=Lachnospiraceae bacterium 2_1_58FAA RepID=F7JZC3_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:EGN45783.1}; TaxID=658082 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae.;" source="Lachnospiraceae bacterium 2_1_58FAA.;"
oxidoreductase
Displaying items 1-30 of 93 in total

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