ggKbase home page

L3_102_363G1_scaffold_93

Search features with annotation key words

Displaying items 1-30 of 169 in total
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
L3_102_363G1_scaffold_93_1
Bacteroides fragilis, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

1..1263
DNA (1263bp) protein (421aa)
Transposase, IS4 family n=4 Tax=Bacteria RepID=F3PV28_9BACE
transposase
Putative uncharacterized protein IS612 {ECO:0000313|EMBL:BAA95637.1}; TaxID=817 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides.;" source="Bacteroides fragilis.;"
L3_102_363G1_scaffold_93_2
Bacteroides ovatus, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(2085..3443)
DNA (1359bp) protein (453aa)
Efflux transporter, outer membrane factor lipoprotein, NodT family n=9 Tax=Bacteroidales RepID=C6Z409_9BACE
Putative uncharacterized protein {ECO:0000313|EMBL:CAD89791.1}; TaxID=28116 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides.;" source="Bacteroides ovatus.;"
NodT family RND efflux system outer membrane lipoprotein
L3_102_363G1_scaffold_93_3
Bacteroides fluxus, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(3444..6557)
DNA (3114bp) protein (1038aa)
Putative multidrug efflux pump BpeF n=1 Tax=Bacteroides fluxus YIT 12057 RepID=F3PYA9_9BACE
Putative multidrug efflux pump BpeF {ECO:0000313|EMBL:EGF50669.1}; TaxID=763034 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides.;" source="Bacteroides fluxus YIT 12057.;"
hydrophobe/amphiphile efflux-1 (HAE1) family transporter
L3_102_363G1_scaffold_93_4
Bacteroides fluxus, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(6554..7675)
DNA (1122bp) protein (374aa)
Efflux transporter, RND family, MFP subunit n=3 Tax=Bacteroides RepID=C6IR25_9BACE
Efflux transporter, RND family, MFP subunit {ECO:0000313|EMBL:EGF50668.1}; TaxID=763034 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides.;" source="Bacteroides fluxus YIT 12057.;"
hypothetical protein
L3_102_363G1_scaffold_93_5
Bacteroides ovatus, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(7719..8921)
DNA (1203bp) protein (401aa)
Acetyltransferase n=7 Tax=Bacteroidales RepID=E5VDJ3_9BACE
Putative uncharacterized protein {ECO:0000313|EMBL:CAD89794.1}; TaxID=28116 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides.;" source="Bacteroides ovatus.;"
LPS biosynthesis glycosyltransferase
L3_102_363G1_scaffold_93_6
Bacteroides xylanisolvens, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(9033..9605)
DNA (573bp) protein (191aa)
Transcription termination/antitermination factor NusG n=6 Tax=Bacteroidales RepID=F3PYA6_9BACE
Uncharacterized protein {ECO:0000313|EMBL:EIY87757.1}; TaxID=997892 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides.;" source="Bacteroides xylanisolvens CL03T12C04.;"
transcriptional regulator UpxY-like protein
L3_102_363G1_scaffold_93_7
Prevotella stercorea, Prevotella, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(10111..11319)
DNA (1209bp) protein (403aa)
Site-specific recombinase, phage integrase family n=13 Tax=root RepID=B3CAR4_9BACE
Site-specific recombinase, phage integrase family {ECO:0000313|EMBL:EHJ41742.1}; TaxID=1002367 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Prevotellaceae; Prevotella.;" source="Prevotella stercorea DSM 18206.;"
transposase
L3_102_363G1_scaffold_93_8
Bacteroides sp. 4_3_47FAA, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(11408..11905)
DNA (498bp) protein (166aa)
Uncharacterized protein n=9 Tax=Bacteroidales RepID=C6Z414_9BACE
Uncharacterized protein {ECO:0000313|EMBL:EET15623.1}; TaxID=457394 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides.;" source="Bacteroides sp. 4_3_47FAA.;"
Phage-related lysozyme (muraminidase)
L3_102_363G1_scaffold_93_9
Prevotella stercorea, Prevotella, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(11959..14148)
DNA (2190bp) protein (730aa)
Uncharacterized protein n=10 Tax=root RepID=C6ITP3_9BACE
Uncharacterized protein {ECO:0000313|EMBL:EHJ41744.1}; TaxID=1002367 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Prevotellaceae; Prevotella.;" source="Prevotella stercorea DSM 18206.;"
mobilization protein
L3_102_363G1_scaffold_93_10
Bacteroides dorei, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(14229..15137)
DNA (909bp) protein (303aa)
Uncharacterized protein n=12 Tax=Bacteroidales RepID=C6ITP4_9BACE
Putative uncharacterized protein {ECO:0000313|EMBL:EEB23788.1}; TaxID=483217 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides.;" source="Bacteroides dorei DSM 17855.;"
L3_102_363G1_scaffold_93_11
Bacteroides dorei, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(15204..15857)
DNA (654bp) protein (218aa)
Uncharacterized protein n=12 Tax=Bacteroidales RepID=F3PYA0_9BACE
Putative uncharacterized protein {ECO:0000313|EMBL:EEB23787.1}; TaxID=483217 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides.;" source="Bacteroides dorei DSM 17855.;"
hypothetical protein
L3_102_363G1_scaffold_93_12
Prevotella stercorea, Prevotella, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(15866..16411)
DNA (546bp) protein (182aa)
Uncharacterized protein n=11 Tax=Bacteroidales RepID=C6ITP6_9BACE
Uncharacterized protein {ECO:0000313|EMBL:EHJ41747.1}; TaxID=1002367 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Prevotellaceae; Prevotella.;" source="Prevotella stercorea DSM 18206.;"
hypothetical protein
L3_102_363G1_scaffold_93_13
Bacteroides dorei, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(16411..17256)
DNA (846bp) protein (282aa)
Conjugative transposon TraN protein n=12 Tax=Bacteroidales RepID=C6ITP7_9BACE
Putative uncharacterized protein {ECO:0000313|EMBL:EEB23785.1}; TaxID=483217 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides.;" source="Bacteroides dorei DSM 17855.;"
conjugal transfer protein TraN
L3_102_363G1_scaffold_93_14
Bacteroides dorei, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(17326..18468)
DNA (1143bp) protein (381aa)
Conjugative transposon TraM protein n=12 Tax=Bacteroidales RepID=C6ITP8_9BACE
Putative uncharacterized protein {ECO:0000313|EMBL:EEB23784.1}; TaxID=483217 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides.;" source="Bacteroides dorei DSM 17855.;"
conjugative transposon TraM protein
L3_102_363G1_scaffold_93_15
Bacteroides dorei, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(18465..18800)
DNA (336bp) protein (112aa)
Uncharacterized protein n=12 Tax=Bacteroidales RepID=C6ITP9_9BACE
Putative uncharacterized protein {ECO:0000313|EMBL:EEB23783.1}; TaxID=483217 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides.;" source="Bacteroides dorei DSM 17855.;"
hypothetical protein
L3_102_363G1_scaffold_93_16
Bacteroides fragilis, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(18813..19427)
DNA (615bp) protein (205aa)
Conjugative transposon TraK protein n=11 Tax=Bacteroidales RepID=C6ITQ0_9BACE
Conjugative transposon TraK protein {ECO:0000313|EMBL:EKA84437.1}; TaxID=1073387 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides.;" source="Bacteroides fragilis HMW 615.;"
conjugal transfer protein TraK
L3_102_363G1_scaffold_93_17
Bacteroides dorei, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(19431..19832)
DNA (402bp) protein (134aa)
Uncharacterized protein n=11 Tax=Bacteroidales RepID=C6ITQ1_9BACE
Putative uncharacterized protein {ECO:0000313|EMBL:EEB23781.1}; TaxID=483217 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides.;" source="Bacteroides dorei DSM 17855.;"
hypothetical protein
L3_102_363G1_scaffold_93_18
Bacteroides coprophilus, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(19898..20884)
DNA (987bp) protein (329aa)
Putative uncharacterized protein n=1 Tax=Bacteroides sp. 2_1_56FAA RepID=F7LMQ8_9BACE
Uncharacterized protein {ECO:0000313|EMBL:EEF77491.1}; TaxID=547042 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides.;" source="Bacteroides coprophilus DSM 18228 = JCM 13818.;"
membrane protein
L3_102_363G1_scaffold_93_19
Bacteroides caccae, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

21104..22285
DNA (1182bp) protein (394aa)
Uncharacterized protein n=1 Tax=Bacteroides caccae CL03T12C61 RepID=I8VAX6_9BACE
Uncharacterized protein {ECO:0000313|EMBL:EIY23570.1}; TaxID=997873 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides.;" source="Bacteroides caccae CL03T12C61.;"
integrase
L3_102_363G1_scaffold_93_20
Bacteroides caccae, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

22282..23451
DNA (1170bp) protein (390aa)
Uncharacterized protein n=1 Tax=Bacteroides caccae CL03T12C61 RepID=I9ET42_9BACE
Uncharacterized protein {ECO:0000313|EMBL:EIY23569.1}; TaxID=997873 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides.;" source="Bacteroides caccae CL03T12C61.;"
recombinase
L3_102_363G1_scaffold_93_21
Bacteroides caccae, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

23596..23808
DNA (213bp) protein (71aa)
Uncharacterized protein n=1 Tax=Bacteroides caccae CL03T12C61 RepID=I9Q3T2_9BACE
Uncharacterized protein {ECO:0000313|EMBL:EIY23568.1}; TaxID=997873 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides.;" source="Bacteroides caccae CL03T12C61.;"
hypothetical protein
L3_102_363G1_scaffold_93_22
Bacteroides caccae, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

23810..25264
DNA (1455bp) protein (485aa)
Uncharacterized protein n=1 Tax=Bacteroides caccae CL03T12C61 RepID=I8VE00_9BACE
Uncharacterized protein {ECO:0000313|EMBL:EIY23567.1}; TaxID=997873 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides.;" source="Bacteroides caccae CL03T12C61.;"
Eco57I restriction endonuclease
L3_102_363G1_scaffold_93_23
Bacteroides caccae, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

25252..26184
DNA (933bp) protein (311aa)
Uncharacterized protein n=1 Tax=Bacteroides caccae CL03T12C61 RepID=I9Q360_9BACE
Uncharacterized protein {ECO:0000313|EMBL:EIY23566.1}; TaxID=997873 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides.;" source="Bacteroides caccae CL03T12C61.;"
type II site-specific deoxyribonuclease
L3_102_363G1_scaffold_93_24
Bacteroides caccae, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

26220..26834
DNA (615bp) protein (205aa)
Uncharacterized protein n=1 Tax=Bacteroides caccae CL03T12C61 RepID=I8VAX1_9BACE
Uncharacterized protein {ECO:0000313|EMBL:EIY23565.1}; TaxID=997873 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides.;" source="Bacteroides caccae CL03T12C61.;"
L3_102_363G1_scaffold_93_25
Bacteroides caccae, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

26846..27565
DNA (720bp) protein (240aa)
Uncharacterized protein n=1 Tax=Bacteroides caccae CL03T12C61 RepID=I9ET39_9BACE
Uncharacterized protein {ECO:0000313|EMBL:EIY23564.1}; TaxID=997873 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides.;" source="Bacteroides caccae CL03T12C61.;"
hypothetical protein
L3_102_363G1_scaffold_93_26
Bacteroides caccae, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

27621..28064
DNA (444bp) protein (148aa)
Uncharacterized protein n=1 Tax=Bacteroides caccae CL03T12C61 RepID=I9Q3T0_9BACE
Uncharacterized protein {ECO:0000313|EMBL:EIY23563.1}; TaxID=997873 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides.;" source="Bacteroides caccae CL03T12C61.;"
hypothetical protein
L3_102_363G1_scaffold_93_27
Bacteroides caccae, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

28074..28811
DNA (738bp) protein (246aa)
DNA topoisomerase 1 n=1 Tax=Bacteroides caccae CL03T12C61 RepID=I8VDZ6_9BACE
DNA topoisomerase 1 {ECO:0000313|EMBL:EIY23562.1}; TaxID=997873 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides.;" source="Bacteroides caccae CL03T12C61.;"
putative C-terminal domain of topoisomerase IA
L3_102_363G1_scaffold_93_28
Bacteroides caccae, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(28821..29366)
DNA (546bp) protein (182aa)
Uncharacterized protein n=1 Tax=Bacteroides caccae CL03T12C61 RepID=I9Q355_9BACE
Uncharacterized protein {ECO:0000313|EMBL:EIY23561.1}; TaxID=997873 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides.;" source="Bacteroides caccae CL03T12C61.;"
hypothetical protein
L3_102_363G1_scaffold_93_29
Bacteroides caccae, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(29391..30602)
DNA (1212bp) protein (404aa)
Uncharacterized protein n=1 Tax=Bacteroides caccae CL03T12C61 RepID=I8VAW6_9BACE
Uncharacterized protein {ECO:0000313|EMBL:EIY23560.1}; TaxID=997873 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides.;" source="Bacteroides caccae CL03T12C61.;"
hypothetical protein
L3_102_363G1_scaffold_93_30
Bacteroides caccae, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(30618..31025)
DNA (408bp) protein (136aa)
Uncharacterized protein n=1 Tax=Bacteroides caccae CL03T12C61 RepID=I9ET36_9BACE
Uncharacterized protein {ECO:0000313|EMBL:EIY23559.1}; TaxID=997873 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides.;" source="Bacteroides caccae CL03T12C61.;"
hypothetical protein
Displaying items 1-30 of 169 in total

View Taxonomy