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L3_102_363G1_scaffold_136

Search features with annotation key words

Displaying items 1-30 of 44 in total
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
L3_102_363G1_scaffold_136_1
Bifidobacterium pseudocatenulatum, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

1..612
DNA (612bp) protein (204aa)
Repeat protein (Fragment) n=1 Tax=Bifidobacterium pseudocatenulatum DSM 20438 = JCM 1200 RepID=C0BUP6_9BIFI
Uncharacterized protein {ECO:0000313|EMBL:BAR02787.1}; TaxID=547043 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium pseudocatenulatum DSM 20438 = JCM 1200 = LMG 10505.;"
L3_102_363G1_scaffold_136_2
Bifidobacterium catenulatum, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

1501..1737
DNA (237bp) protein (79aa)
Glutaredoxin n=3 Tax=Bifidobacterium RepID=B6XSF3_9BIFI
glutaredoxin
Glutaredoxin {ECO:0000313|EMBL:EEB22517.1}; Putative glutaredoxin {ECO:0000313|EMBL:BAR01063.1}; TaxID=566552 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium catenulatum DSM 16992 = JCM 1194 = LMG 11043.;"
L3_102_363G1_scaffold_136_3
Bifidobacterium pseudocatenulatum, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(1898..3169)
DNA (1272bp) protein (424aa)
Uncharacterized protein n=1 Tax=Bifidobacterium pseudocatenulatum CAG:263 RepID=R6Q2N1_9BIFI
Membrane protein {ECO:0000313|EMBL:KEF29121.1}; TaxID=1454376 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium pseudocatenulatum IPLA36007.;"
membrane protein
L3_102_363G1_scaffold_136_4
Bifidobacterium pseudocatenulatum CAG:263, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

3542..6289
DNA (2748bp) protein (916aa)
Uncharacterized protein n=1 Tax=Bifidobacterium pseudocatenulatum CAG:263 RepID=R6NVS1_9BIFI
Uncharacterized protein {ECO:0000313|EMBL:CDC16228.1}; TaxID=1263060 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium; environmental samples.;" source="Bifidobacterium pseudocatenulatum CAG:263.;"
membrane protein
L3_102_363G1_scaffold_136_5
Bifidobacterium pseudocatenulatum CAG:263, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

6286..8478
DNA (2193bp) protein (731aa)
Uncharacterized protein n=1 Tax=Bifidobacterium pseudocatenulatum CAG:263 RepID=R6P6D1_9BIFI
Uncharacterized protein {ECO:0000313|EMBL:CDC16229.1}; TaxID=1263060 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium; environmental samples.;" source="Bifidobacterium pseudocatenulatum CAG:263.;"
phage infection protein
L3_102_363G1_scaffold_136_6
Bifidobacterium pseudocatenulatum, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

8475..9128
DNA (654bp) protein (218aa)
Uncharacterized protein n=1 Tax=Bifidobacterium pseudocatenulatum CAG:263 RepID=R6Q2N6_9BIFI
TetR family transcriptional regulator {ECO:0000313|EMBL:KEF29124.1}; TaxID=1454376 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium pseudocatenulatum IPLA36007.;"
TetR family transcriptional regulator
L3_102_363G1_scaffold_136_7
unknown

Not on your lists

9173..9289
DNA (117bp) protein (39aa)

This feature has no annotations

L3_102_363G1_scaffold_136_8
Bifidobacterium pseudocatenulatum, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(9268..9825)
DNA (558bp) protein (186aa)
Uncharacterized protein n=1 Tax=Bifidobacterium pseudocatenulatum CAG:263 RepID=R6NVS6_9BIFI
FMN-binding protein {ECO:0000313|EMBL:KEF29125.1}; TaxID=1454376 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium pseudocatenulatum IPLA36007.;"
FMN-binding protein
L3_102_363G1_scaffold_136_9
Bifidobacterium pseudocatenulatum CAG:263, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(9882..10703)
DNA (822bp) protein (274aa)
Uncharacterized protein n=1 Tax=Bifidobacterium pseudocatenulatum CAG:263 RepID=R6PCF6_9BIFI
Uncharacterized protein {ECO:0000313|EMBL:CDC16236.1}; TaxID=1263060 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium; environmental samples.;" source="Bifidobacterium pseudocatenulatum CAG:263.;"
ABC transporter ATP-binding protein
L3_102_363G1_scaffold_136_10
Bifidobacterium pseudocatenulatum CAG:263, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(10706..11965)
DNA (1260bp) protein (420aa)
Uncharacterized protein n=1 Tax=Bifidobacterium pseudocatenulatum CAG:263 RepID=R6NVT1_9BIFI
Uncharacterized protein {ECO:0000313|EMBL:CDC16238.1}; TaxID=1263060 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium; environmental samples.;" source="Bifidobacterium pseudocatenulatum CAG:263.;"
ABC transporter permease
L3_102_363G1_scaffold_136_11
Bifidobacterium pseudocatenulatum, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(12052..13407)
DNA (1356bp) protein (452aa)
Uncharacterized protein n=1 Tax=Bifidobacterium pseudocatenulatum CAG:263 RepID=R6PCF9_9BIFI
ABC transporter permease {ECO:0000313|EMBL:KEF29128.1}; TaxID=1454376 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium pseudocatenulatum IPLA36007.;"
ABC transporter permease
L3_102_363G1_scaffold_136_12
Bifidobacterium pseudocatenulatum, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(13424..14695)
DNA (1272bp) protein (424aa)
Uncharacterized protein n=1 Tax=Bifidobacterium pseudocatenulatum CAG:263 RepID=R6Q2P3_9BIFI
Membrane protein {ECO:0000313|EMBL:KEF29129.1}; TaxID=1454376 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium pseudocatenulatum IPLA36007.;"
membrane protein
L3_102_363G1_scaffold_136_13
Bifidobacterium pseudocatenulatum, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(15041..15703)
DNA (663bp) protein (221aa)
Uncharacterized protein n=1 Tax=Bifidobacterium pseudocatenulatum CAG:263 RepID=R6NVT4_9BIFI
Amino acid ABC transporter substrate-binding protein {ECO:0000313|EMBL:KEF29130.1}; TaxID=1454376 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium pseudocatenulatum IPLA36007.;"
hypothetical protein
L3_102_363G1_scaffold_136_14
Bifidobacterium pseudocatenulatum CAG:263, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(15793..17556)
DNA (1764bp) protein (588aa)
Uncharacterized protein n=1 Tax=Bifidobacterium pseudocatenulatum CAG:263 RepID=R6P6E8_9BIFI
Uncharacterized protein {ECO:0000313|EMBL:CDC16244.1}; TaxID=1263060 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium; environmental samples.;" source="Bifidobacterium pseudocatenulatum CAG:263.;"
iron permease
L3_102_363G1_scaffold_136_15
Bifidobacterium pseudocatenulatum CAG:263, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(17949..19463)
DNA (1515bp) protein (505aa)
Transporter major facilitator family protein n=1 Tax=Bifidobacterium pseudocatenulatum CAG:263 RepID=R6NYI9_9BIFI
Transporter major facilitator family protein {ECO:0000313|EMBL:CDC16245.1}; TaxID=1263060 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium; environmental samples.;" source="Bifidobacterium pseudocatenulatum CAG:263.;"
symporter
L3_102_363G1_scaffold_136_16
Bifidobacterium pseudocatenulatum CAG:263, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

19483..20430
DNA (948bp) protein (316aa)
ApbE family thiamine biosynthesis lipoprotein n=1 Tax=Bifidobacterium pseudocatenulatum CAG:263 RepID=R6Q2P6_9BIFI
ApbE family thiamine biosynthesis lipoprotein {ECO:0000313|EMBL:CDC16247.1}; TaxID=1263060 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium; environmental samples.;" source="Bifidobacterium pseudocatenulatum CAG:263.;"
hypothetical protein
L3_102_363G1_scaffold_136_17
Bifidobacterium pseudocatenulatum CAG:263, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(20516..22333)
DNA (1818bp) protein (606aa)
Uncharacterized protein n=1 Tax=Bifidobacterium pseudocatenulatum CAG:263 RepID=R6NVT8_9BIFI
Uncharacterized protein {ECO:0000313|EMBL:CDC16248.1}; TaxID=1263060 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium; environmental samples.;" source="Bifidobacterium pseudocatenulatum CAG:263.;"
ABC transporter
L3_102_363G1_scaffold_136_18
Bifidobacterium pseudocatenulatum CAG:263, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(22350..24317)
DNA (1968bp) protein (656aa)
Uncharacterized protein n=1 Tax=Bifidobacterium pseudocatenulatum CAG:263 RepID=R6NYJ2_9BIFI
Uncharacterized protein {ECO:0000313|EMBL:CDC16250.1}; TaxID=1263060 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium; environmental samples.;" source="Bifidobacterium pseudocatenulatum CAG:263.;"
mdlB2; mdlb2
L3_102_363G1_scaffold_136_19
Bifidobacterium pseudocatenulatum, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(24623..25117)
DNA (495bp) protein (165aa)
MarR-type transcriptional regulator n=1 Tax=Bifidobacterium pseudocatenulatum CAG:263 RepID=R6PCH0_9BIFI
MarR family transcriptional regulator {ECO:0000313|EMBL:KEF29135.1}; TaxID=1454376 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium pseudocatenulatum IPLA36007.;"
MarR family transcriptional regulator
L3_102_363G1_scaffold_136_20
Bifidobacterium kashiwanohense, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(25236..26201)
DNA (966bp) protein (322aa)
Oxidoreductase, aldo/keto reductase family protein n=1 Tax=Bifidobacterium catenulatum DSM 16992 = JCM 1194 RepID=B6XSC7_9BIFI
oxidoreductase
Oxidoreductase {ECO:0000313|EMBL:AIZ13750.1}; TaxID=1447716 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium kashiwanohense PV20-2.;"
L3_102_363G1_scaffold_136_21
Bifidobacterium pseudocatenulatum, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

26810..27004
DNA (195bp) protein (65aa)
Uncharacterized protein n=3 Tax=Bifidobacterium RepID=R6NYJ6_9BIFI
Thiamine biosynthesis protein ThiS {ECO:0000313|EMBL:KEF29137.1}; TaxID=1454376 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium pseudocatenulatum IPLA36007.;"
thiamine biosynthesis protein ThiS
L3_102_363G1_scaffold_136_22
Bifidobacterium kashiwanohense, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

27132..27845
DNA (714bp) protein (238aa)
Uncharacterized protein n=1 Tax=Bifidobacterium pseudocatenulatum CAG:263 RepID=R6Q2Q5_9BIFI
thiamine biosynthesis protein ThiF
Thiamine biosynthesis protein ThiF {ECO:0000313|EMBL:AIZ13748.1}; TaxID=1447716 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium kashiwanohense PV20-2.;"
L3_102_363G1_scaffold_136_23
Bifidobacterium pseudocatenulatum, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

27963..28877
DNA (915bp) protein (305aa)
Thiazole synthase {ECO:0000256|HAMAP-Rule:MF_00443}; EC=2.8.1.10 {ECO:0000256|HAMAP-Rule:MF_00443};; TaxID=547043 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium pseudocatenulatum DSM 20438 = JCM 1200 = LMG 10505.;"
Thiazole synthase n=3 Tax=Bifidobacterium RepID=B6XSC4_9BIFI
thiG; thiazole synthase
L3_102_363G1_scaffold_136_24
Bifidobacterium pseudocatenulatum, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(29004..30551)
DNA (1548bp) protein (516aa)
Uncharacterized protein n=1 Tax=Bifidobacterium pseudocatenulatum CAG:263 RepID=R6P6G0_9BIFI
Amino acid transporter {ECO:0000313|EMBL:KEF29140.1}; TaxID=1454376 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium pseudocatenulatum IPLA36007.;"
amino acid transporter
L3_102_363G1_scaffold_136_25
Bifidobacterium pseudocatenulatum, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(30910..31563)
DNA (654bp) protein (218aa)
Uncharacterized protein n=2 Tax=Bifidobacterium RepID=C0BUL7_9BIFI
Uncharacterized protein {ECO:0000313|EMBL:EEG70358.1}; TaxID=547043 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium pseudocatenulatum DSM 20438 = JCM 1200 = LMG 10505.;"
hypothetical protein
L3_102_363G1_scaffold_136_26
Bifidobacterium pseudocatenulatum, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(31750..33270)
DNA (1521bp) protein (507aa)
LPXTG-motif cell wall anchor domain protein n=1 Tax=Bifidobacterium pseudocatenulatum DSM 20438 = JCM 1200 RepID=C0BUL5_9BIFI
Uncharacterized protein {ECO:0000313|EMBL:KEF29142.1}; TaxID=1454376 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium pseudocatenulatum IPLA36007.;"
fimbrial subunit FimA
L3_102_363G1_scaffold_136_27
Bifidobacterium pseudocatenulatum, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(33420..35846)
DNA (2427bp) protein (809aa)
Pilin isopeptide linkage domain protein n=1 Tax=Bifidobacterium pseudocatenulatum DSM 20438 = JCM 1200 RepID=C0BUL4_9BIFI
Pilin isopeptide linkage domain protein {ECO:0000313|EMBL:EEG70354.1}; TaxID=547043 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium pseudocatenulatum DSM 20438 = JCM 1200 = LMG 10505.;"
hypothetical protein
L3_102_363G1_scaffold_136_28
Bifidobacterium pseudocatenulatum, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(36098..37213)
DNA (1116bp) protein (372aa)
Sortase family protein n=2 Tax=Bifidobacterium RepID=C0BUL2_9BIFI
Putative sortase {ECO:0000313|EMBL:BAR02762.1}; TaxID=547043 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium pseudocatenulatum DSM 20438 = JCM 1200 = LMG 10505.;"
Sortase
L3_102_363G1_scaffold_136_29
Bifidobacterium pseudocatenulatum, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(37288..37749)
DNA (462bp) protein (154aa)
Uncharacterized protein n=2 Tax=Bifidobacterium RepID=C0BUL1_9BIFI
Uncharacterized protein {ECO:0000313|EMBL:KEF29144.1}; TaxID=1454376 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium pseudocatenulatum IPLA36007.;"
hypothetical protein
L3_102_363G1_scaffold_136_30
Bifidobacterium pseudocatenulatum, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

38042..39538
DNA (1497bp) protein (499aa)
Transporter, CPA2 family n=3 Tax=root RepID=C0BUK9_9BIFI
Potassium transporter {ECO:0000313|EMBL:KEF29145.1}; TaxID=1454376 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium pseudocatenulatum IPLA36007.;"
sodium:proton exchanger
Displaying items 1-30 of 44 in total

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