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L3_102_363G1_scaffold_170

Search features with annotation key words

Displaying items 1-30 of 87 in total
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
L3_102_363G1_scaffold_170_1
Faecalibacterium prausnitzii, Faecalibacterium, Clostridiales, Clostridia, Firmicutes, Bacteria

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comp(377..1765)
DNA (1389bp) protein (463aa)
Phage integrase family n=1 Tax=Faecalibacterium prausnitzii L2-6 RepID=D4JXZ5_9FIRM
Phage integrase family.
Phage integrase family {ECO:0000313|EMBL:CBK98894.1}; TaxID=718252 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Faecalibacterium.;" source="Faecalibacterium prausnitzii L2-6.;"
L3_102_363G1_scaffold_170_2
Faecalibacterium prausnitzii, Faecalibacterium, Clostridiales, Clostridia, Firmicutes, Bacteria

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comp(1782..2096)
DNA (315bp) protein (105aa)
DNA binding domain, excisionase family n=1 Tax=Faecalibacterium prausnitzii M21/2 RepID=A8S8V5_9FIRM
DNA binding domain, excisionase family {ECO:0000313|EMBL:EDP22265.1}; TaxID=411485 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Faecalibacterium.;" source="Faecalibacterium prausnitzii M21/2.;"
hypothetical protein
L3_102_363G1_scaffold_170_3
Tepidanaerobacter acetatoxydans, Tepidanaerobacter, Thermoanaerobacterales, Clostridia, Firmicutes, Bacteria

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2461..3255
DNA (795bp) protein (265aa)
Transcriptional regulator, DeoR family n=1 Tax=Tepidanaerobacter acetatoxydans (strain DSM 21804 / JCM 16047 / Re1) RepID=F4LS02_TEPAE
Transcriptional regulator, DeoR family
Transcriptional regulator, DeoR family {ECO:0000313|EMBL:CCP27229.1}; TaxID=1209989 species="Bacteria; Firmicutes; Clostridia; Thermoanaerobacterales; Thermoanaerobacteraceae; Tepidanaerobacter.;" source="Tepidanaerobacter acetatoxydans (strain DSM 21804 / JCM 16047 / Re1).;"
L3_102_363G1_scaffold_170_4
[Clostridium] citroniae, Lachnoclostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

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3862..5094
DNA (1233bp) protein (411aa)
Putative uncharacterized protein n=1 Tax=Clostridium citroniae WAL-17108 PF6_9CLOT">RepID=G5HPF6_9CLOT
Uncharacterized protein {ECO:0000313|EMBL:EHE96677.1}; TaxID=742733 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae.;" source="[Clostridium] citroniae WAL-17108.;"
type III effector Hrp-dependent outer
L3_102_363G1_scaffold_170_5
[Clostridium] citroniae, Lachnoclostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

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5094..5699
DNA (606bp) protein (202aa)
L-fuculose phosphate aldolase (EC:4.1.2.17)
Putative uncharacterized protein n=1 Tax=Clostridium citroniae WAL-17108 PF5_9CLOT">RepID=G5HPF5_9CLOT
Uncharacterized protein {ECO:0000313|EMBL:EHE96676.1}; TaxID=742733 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae.;" source="[Clostridium] citroniae WAL-17108.;"
L3_102_363G1_scaffold_170_6
Clostridium sp. FS41, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

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5765..6838
DNA (1074bp) protein (358aa)
Putative uncharacterized protein n=1 Tax=Clostridium citroniae WAL-17108 RepID=G5HPG1_9CLOT
Sialic acid-binding periplasmic protein SiaP {ECO:0000313|EMBL:KJJ72385.1}; TaxID=1609975 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium sp. FS41.;"
C4-dicarboxylate ABC transporter substrate-binding protein
L3_102_363G1_scaffold_170_7
Clostridium sp. FS41, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

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6932..7483
DNA (552bp) protein (184aa)
Putative uncharacterized protein n=1 Tax=Clostridium citroniae WAL-17108 RepID=G5HPG0_9CLOT
2,3-diketo-L-gulonate TRAP transporter small permease protein YiaM {ECO:0000313|EMBL:KJJ72384.1}; TaxID=1609975 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium sp. FS41.;"
TRAP-type C4-dicarboxylate transport system, small permease component
L3_102_363G1_scaffold_170_8
Clostridium sp. FS41, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

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7500..8813
DNA (1314bp) protein (438aa)
Putative uncharacterized protein n=1 Tax=Clostridium citroniae WAL-17108 PF9_9CLOT">RepID=G5HPF9_9CLOT
Sialic acid TRAP transporter permease protein SiaT {ECO:0000313|EMBL:KJJ72383.1}; TaxID=1609975 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium sp. FS41.;"
putative transporter
L3_102_363G1_scaffold_170_9
[Clostridium] citroniae, Lachnoclostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

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8839..9651
DNA (813bp) protein (271aa)
fructose-bisphosphate aldolase (EC:4.1.2.13)
Putative uncharacterized protein n=1 Tax=Clostridium citroniae WAL-17108 PF8_9CLOT">RepID=G5HPF8_9CLOT
Uncharacterized protein {ECO:0000313|EMBL:EHE96679.1}; TaxID=742733 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae.;" source="[Clostridium] citroniae WAL-17108.;"
L3_102_363G1_scaffold_170_10
Clostridium sp. FS41, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

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9664..10656
DNA (993bp) protein (331aa)
5-dehydro-2-deoxygluconokinase {ECO:0000313|EMBL:KJJ72381.1}; EC=2.7.1.92 {ECO:0000313|EMBL:KJJ72381.1};; TaxID=1609975 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium sp. FS41.;"
Putative uncharacterized protein n=1 Tax=Clostridium citroniae WAL-17108 PF7_9CLOT">RepID=G5HPF7_9CLOT
myo-inositol catabolism protein iolC/5-dehydro-2-deoxygluconokinase
L3_102_363G1_scaffold_170_11
Faecalibacterium prausnitzii, Faecalibacterium, Clostridiales, Clostridia, Firmicutes, Bacteria

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11533..13179
DNA (1647bp) protein (549aa)
RND family efflux transporter, MFP subunit n=1 Tax=Faecalibacterium prausnitzii L2-6 RepID=D4JXY5_9FIRM
RND family efflux transporter, MFP subunit
RND family efflux transporter, MFP subunit {ECO:0000313|EMBL:CBK98884.1}; TaxID=718252 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Faecalibacterium.;" source="Faecalibacterium prausnitzii L2-6.;"
L3_102_363G1_scaffold_170_12
Faecalibacterium prausnitzii, Faecalibacterium, Clostridiales, Clostridia, Firmicutes, Bacteria

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13176..13934
DNA (759bp) protein (253aa)
ABC-type antimicrobial peptide transport system, ATPase component (EC:3.6.3.-)
ABC-type antimicrobial peptide transport system, ATPase component {ECO:0000313|EMBL:CBK98883.1}; EC=3.6.3.- {ECO:0000313|EMBL:CBK98883.1};; TaxID=718252 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Faecalibacterium.;" source="Faecalibacterium prausnitzii L2-6.;"
ABC-type antimicrobial peptide transport system, ATPase component n=1 Tax=Faecalibacterium prausnitzii L2-6 RepID=D4JXY4_9FIRM
L3_102_363G1_scaffold_170_13
Faecalibacterium prausnitzii, Faecalibacterium, Clostridiales, Clostridia, Firmicutes, Bacteria

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13931..15133
DNA (1203bp) protein (401aa)
ABC-type antimicrobial peptide transport system, permease component n=1 Tax=Faecalibacterium prausnitzii L2-6 RepID=D4JXY3_9FIRM
ABC-type antimicrobial peptide transport system, permease component
ABC-type antimicrobial peptide transport system, permease component {ECO:0000313|EMBL:CBK98882.1}; TaxID=718252 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Faecalibacterium.;" source="Faecalibacterium prausnitzii L2-6.;"
L3_102_363G1_scaffold_170_14
Faecalibacterium prausnitzii, Faecalibacterium, Clostridiales, Clostridia, Firmicutes, Bacteria

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15144..17285
DNA (2142bp) protein (714aa)
S-layer homology domain n=1 Tax=Faecalibacterium prausnitzii L2-6 RepID=D4JXY2_9FIRM
S-layer homology domain.
S-layer homology domain {ECO:0000313|EMBL:CBK98881.1}; TaxID=718252 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Faecalibacterium.;" source="Faecalibacterium prausnitzii L2-6.;"
L3_102_363G1_scaffold_170_15
Anaerotruncus colihominis, Anaerotruncus, Clostridiales, Clostridia, Firmicutes, Bacteria

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17418..17672
DNA (255bp) protein (85aa)
Prevent-host-death family protein n=2 Tax=Clostridiales RepID=B0PGM7_9FIRM
Prevent-host-death family protein {ECO:0000313|EMBL:EDS09406.1}; TaxID=445972 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Anaerotruncus.;" source="Anaerotruncus colihominis DSM 17241.;"
prevent-host-death family protein
L3_102_363G1_scaffold_170_16
Firmicutes bacterium CAG:170, Firmicutes, Bacteria

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17815..17997
DNA (183bp) protein (61aa)
Addiction module toxin RelE/StbE family n=1 Tax=Firmicutes bacterium CAG:170 RepID=R6MRV7_9FIRM
Addiction module toxin RelE/StbE family {ECO:0000313|EMBL:CDB88562.1}; TaxID=1263006 species="Bacteria; Firmicutes; environmental samples.;" source="Firmicutes bacterium CAG:170.;"
RelE/StbE family addiction module toxin
L3_102_363G1_scaffold_170_17
Faecalibacterium prausnitzii, Faecalibacterium, Clostridiales, Clostridia, Firmicutes, Bacteria

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18110..18820
DNA (711bp) protein (237aa)
Response regulator of the LytR/AlgR family n=1 Tax=Faecalibacterium prausnitzii L2-6 RepID=D4JXY1_9FIRM
Response regulator of the LytR/AlgR family
Response regulator of the LytR/AlgR family {ECO:0000313|EMBL:CBK98880.1}; TaxID=718252 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Faecalibacterium.;" source="Faecalibacterium prausnitzii L2-6.;"
L3_102_363G1_scaffold_170_18
Faecalibacterium prausnitzii, Faecalibacterium, Clostridiales, Clostridia, Firmicutes, Bacteria

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18817..20097
DNA (1281bp) protein (427aa)
Putative uncharacterized protein n=1 Tax=Faecalibacterium prausnitzii L2-6 RepID=D4JXY0_9FIRM
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:CBK98879.1}; TaxID=718252 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Faecalibacterium.;" source="Faecalibacterium prausnitzii L2-6.;"
L3_102_363G1_scaffold_170_19
Faecalibacterium prausnitzii, Faecalibacterium, Clostridiales, Clostridia, Firmicutes, Bacteria

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20345..23293
DNA (2949bp) protein (983aa)
Beta-glucosidase-related glycosidases (EC:3.2.1.21)
Beta-glucosidase-related glycosidases {ECO:0000313|EMBL:CBK98878.1}; EC=3.2.1.21 {ECO:0000313|EMBL:CBK98878.1};; TaxID=718252 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Faecalibacterium.;" source="Faecalibacterium prausnitzii L2-6.;"
Beta-glucosidase-related glycosidases n=1 Tax=Faecalibacterium prausnitzii L2-6 RepID=D4JXX9_9FIRM
L3_102_363G1_scaffold_170_20
Faecalibacterium prausnitzii, Faecalibacterium, Clostridiales, Clostridia, Firmicutes, Bacteria

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23399..25822
DNA (2424bp) protein (808aa)
Beta-glucosidase-related glycosidases (EC:3.2.1.21)
Beta-glucosidase-related glycosidases {ECO:0000313|EMBL:CBK98877.1}; EC=3.2.1.21 {ECO:0000313|EMBL:CBK98877.1};; TaxID=718252 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Faecalibacterium.;" source="Faecalibacterium prausnitzii L2-6.;"
Beta-glucosidase-related glycosidases n=1 Tax=Faecalibacterium prausnitzii L2-6 RepID=D4JXX8_9FIRM
L3_102_363G1_scaffold_170_21
Faecalibacterium prausnitzii, Faecalibacterium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

25836..26387
DNA (552bp) protein (184aa)
GtrA-like protein n=1 Tax=Faecalibacterium prausnitzii L2-6 RepID=D4JXX7_9FIRM
GtrA-like protein.
GtrA-like protein {ECO:0000313|EMBL:CBK98876.1}; TaxID=718252 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Faecalibacterium.;" source="Faecalibacterium prausnitzii L2-6.;"
L3_102_363G1_scaffold_170_22
unknown

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comp(26288..26626)
DNA (339bp) protein (113aa)

This feature has no annotations

L3_102_363G1_scaffold_170_23
Faecalibacterium prausnitzii, Faecalibacterium, Clostridiales, Clostridia, Firmicutes, Bacteria

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comp(26638..28263)
DNA (1626bp) protein (542aa)
ABC-type multidrug transport system, ATPase and permease components n=1 Tax=Faecalibacterium prausnitzii L2-6 RepID=D4JXX5_9FIRM
ABC-type multidrug transport system, ATPase and permease components {ECO:0000313|EMBL:CBK98874.1}; TaxID=718252 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Faecalibacterium.;" source="Faecalibacterium prausnitzii L2-6.;"
ABC-type multidrug transport system, ATPase and permease components
L3_102_363G1_scaffold_170_24
Faecalibacterium prausnitzii, Faecalibacterium, Clostridiales, Clostridia, Firmicutes, Bacteria

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comp(28389..29993)
DNA (1605bp) protein (535aa)
phosphoenolpyruvate carboxykinase (ATP) (EC:4.1.1.49)
Phosphoenolpyruvate carboxykinase [ATP] {ECO:0000256|HAMAP-Rule:MF_00453}; Short=PCK {ECO:0000256|HAMAP-Rule:MF_00453};; Short=PEP carboxykinase {ECO:0000256|HAMAP-Rule:MF_00453};; Short=PEPCK {ECO:0000256|HAMAP-Rule:MF_00453};; EC=4.1.1.49 {ECO:0000256|HAMAP-Rule:MF_00453, ECO:0000313|EMBL:CBK98872.1};; TaxID=718252 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Faecalibacterium.;" source="Faecalibacterium prausnitzii L2-6.;"
Phosphoenolpyruvate carboxykinase [ATP] n=1 Tax=Faecalibacterium prausnitzii L2-6 RepID=D4JXX3_9FIRM
L3_102_363G1_scaffold_170_25
Faecalibacterium prausnitzii, Faecalibacterium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

30486..31109
DNA (624bp) protein (208aa)
Putative uncharacterized protein n=1 Tax=Faecalibacterium prausnitzii L2-6 RepID=D4JXX2_9FIRM
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:CBK98871.1}; TaxID=718252 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Faecalibacterium.;" source="Faecalibacterium prausnitzii L2-6.;"
L3_102_363G1_scaffold_170_26
Faecalibacterium prausnitzii, Faecalibacterium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

31647..32735
DNA (1089bp) protein (363aa)
tryptophanyl-tRNA synthetase (EC:6.1.1.2)
Tryptophanyl-tRNA synthetase {ECO:0000313|EMBL:CBK98870.1}; EC=6.1.1.2 {ECO:0000313|EMBL:CBK98870.1};; TaxID=718252 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Faecalibacterium.;" source="Faecalibacterium prausnitzii L2-6.;"
Tryptophanyl-tRNA synthetase n=1 Tax=Faecalibacterium prausnitzii L2-6 RepID=D4JXX1_9FIRM
L3_102_363G1_scaffold_170_27
Faecalibacterium prausnitzii, Faecalibacterium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(32802..34586)
DNA (1785bp) protein (595aa)
threonyl-tRNA synthetase/Ser-tRNA(Thr) hydrolase (EC:3.1.1.- 6.1.1.3)
Threonine--tRNA ligase {ECO:0000256|HAMAP-Rule:MF_00184, ECO:0000256|SAAS:SAAS00106033}; EC=6.1.1.3 {ECO:0000256|HAMAP-Rule:MF_00184, ECO:0000256|SAAS:SAAS00106033};; Threonyl-tRNA synthetase {ECO:0000256|HAMAP-Rule:MF_00184}; TaxID=718252 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Faecalibacterium.;" source="Faecalibacterium prausnitzii L2-6.;"
Threonine--tRNA ligase n=1 Tax=Faecalibacterium prausnitzii L2-6 RepID=D4JXW8_9FIRM
L3_102_363G1_scaffold_170_28
Faecalibacterium prausnitzii, Faecalibacterium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

35202..35324
DNA (123bp) protein (41aa)
Putative uncharacterized protein n=1 Tax=Faecalibacterium prausnitzii L2-6 RepID=D4JXW7_9FIRM
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:CBK98866.1}; TaxID=718252 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Faecalibacterium.;" source="Faecalibacterium prausnitzii L2-6.;"
L3_102_363G1_scaffold_170_29
Faecalibacterium prausnitzii, Faecalibacterium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(35467..36735)
DNA (1269bp) protein (423aa)
Chloride channel protein EriC n=1 Tax=Faecalibacterium prausnitzii L2-6 RepID=D4JXW6_9FIRM
Chloride channel protein EriC
Chloride channel protein EriC {ECO:0000313|EMBL:CBK98865.1}; TaxID=718252 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Faecalibacterium.;" source="Faecalibacterium prausnitzii L2-6.;"
L3_102_363G1_scaffold_170_30
Faecalibacterium prausnitzii, Faecalibacterium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(36934..37146)
DNA (213bp) protein (71aa)
Nitrogen regulatory protein P-II n=1 Tax=Faecalibacterium cf. prausnitzii KLE1255 RepID=E2ZFN4_9FIRM
Nitrogen regulatory protein P-II {ECO:0000313|EMBL:EFQ08012.1}; TaxID=748224 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Faecalibacterium.;" source="Faecalibacterium cf. prausnitzii KLE1255.;"
AmtB; ammonia permease
Displaying items 1-30 of 87 in total

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