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L3_102_363G1_scaffold_182

Search features with annotation key words

Displaying items 1-30 of 63 in total
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
L3_102_363G1_scaffold_182_1
Dorea formicigenerans, Dorea, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(3..257)
DNA (255bp) protein (85aa)
Putative uncharacterized protein (Fragment) n=1 Tax=Dorea formicigenerans 4_6_53AFAA RepID=G1WU31_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:EGX71646.1}; Flags: Fragment;; TaxID=742765 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Dorea.;" source="Dorea formicigenerans 4_6_53AFAA.;"
DNA segregation ATPase FtsK/SpoIIIE and related proteins
L3_102_363G1_scaffold_182_2
Peptoclostridium difficile, Peptoclostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(357..899)
DNA (543bp) protein (181aa)
Uncharacterized protein n=8 Tax=Clostridium difficile RepID=T2TJ46_CLODI
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:CBE07558.1}; TaxID=645463 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Peptostreptococcaceae; Peptoclostridium.;" source="Peptoclostridium difficile (strain R20291) (Clostridium difficile).;"
L3_102_363G1_scaffold_182_3
Peptoclostridium difficile, Peptoclostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(924..1382)
DNA (459bp) protein (153aa)
Glyoxalase/Bleomycin resistance /Dioxygenase superfamily protein n=8 Tax=Clostridium difficile RepID=T2V613_CLODI
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:CBE07556.1}; TaxID=645463 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Peptostreptococcaceae; Peptoclostridium.;" source="Peptoclostridium difficile (strain R20291) (Clostridium difficile).;"
L3_102_363G1_scaffold_182_4
Peptoclostridium difficile, Peptoclostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(1489..1902)
DNA (414bp) protein (138aa)
Uncharacterized protein n=1 Tax=Clostridium difficile T6 RepID=U3ZJY0_CLODI
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:CCL31213.1}; TaxID=1215069 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Peptostreptococcaceae; Peptoclostridium.;" source="Peptoclostridium difficile E15.;"
L3_102_363G1_scaffold_182_5
Peptoclostridium difficile, Peptoclostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(1998..2381)
DNA (384bp) protein (128aa)
Putative conjugative transposon protein DUF961 family Tn916-like, CTn1-Orf29 n=1 Tax=Clostridium difficile T6 RepID=U3ZHG1_CLODI
conjugative transposon protein
Putative conjugative transposon protein DUF961 family Tn916-like, CTn1-Orf29 {ECO:0000313|EMBL:CCL31214.1}; TaxID=1215069 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Peptostreptococcaceae; Peptoclostridium.;" source="Peptoclostridium difficile E15.;"
L3_102_363G1_scaffold_182_6
[Clostridium] methylpentosum, Ruminiclostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(2397..2720)
DNA (324bp) protein (108aa)
Putative conjugative transposon protein DUF961 family Tn916-like, CTn1-Orf30 n=1 Tax=Clostridium difficile T6 RepID=U3ZKA0_CLODI
Uncharacterized protein {ECO:0000313|EMBL:EEG30256.1}; TaxID=537013 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminiclostridium.;" source="[Clostridium] methylpentosum DSM 5476.;"
conjugative transposon protein
L3_102_363G1_scaffold_182_7
[Clostridium] methylpentosum, Ruminiclostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(2944..5991)
DNA (3048bp) protein (1016aa)
LPXTG cell wall anchor domain protein n=1 Tax=Clostridium difficile CD69 RepID=T3A374_CLODI
LPXTG-motif cell wall anchor domain protein {ECO:0000313|EMBL:EEG30257.1}; TaxID=537013 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminiclostridium.;" source="[Clostridium] methylpentosum DSM 5476.;"
putative cell surface protein
L3_102_363G1_scaffold_182_8
Blautia sp. CAG:257, Blautia, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(6257..6421)
DNA (165bp) protein (55aa)
Uncharacterized protein n=1 Tax=Blautia sp. CAG:257 RepID=R5XCD0_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:CDA06081.1}; TaxID=1262756 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Blautia; environmental samples.;" source="Blautia sp. CAG:257.;"
L3_102_363G1_scaffold_182_9
Lachnospiraceae bacterium 10-1, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(6535..7407)
DNA (873bp) protein (291aa)
Uncharacterized protein n=1 Tax=Lachnospiraceae bacterium 10-1 RepID=R9N3U0_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:EOS77698.1}; TaxID=1235800 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae.;" source="Lachnospiraceae bacterium 10-1.;"
hypothetical protein
L3_102_363G1_scaffold_182_10
Eubacterium sp. 14-2, Eubacterium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(7404..8138)
DNA (735bp) protein (245aa)
Uncharacterized protein n=1 Tax=Eubacterium sp. 14-2 RepID=S0JI73_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:EOT27568.1}; TaxID=1235790 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Eubacteriaceae; Eubacterium.;" source="Eubacterium sp. 14-2.;"
Response regulator of the LytR/AlgR family
L3_102_363G1_scaffold_182_11
Hungatella hathewayi, Hungatella, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

8337..8510
DNA (174bp) protein (58aa)
DNA-binding helix-turn-helix protein n=2 Tax=Clostridium hathewayi RepID=D3ABQ6_9CLOT
DNA-binding helix-turn-helix protein {ECO:0000313|EMBL:EFD00729.1}; TaxID=566550 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Hungatella.;" source="Hungatella hathewayi DSM 13479.;"
XRE family transcriptional regulator
L3_102_363G1_scaffold_182_12

Not on your lists

comp(9026..9202)
DNA (177bp) protein (59aa)
Uncultured bacterium extrachromosomal DNA RGI01869 {ECO:0000313|EMBL:CDL66704.1}; TaxID=77133 species="Bacteria; environmental samples.;" source="uncultured bacterium.;"
L3_102_363G1_scaffold_182_13
Clostridium hathewayi CAG:224, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists


comp(9829..10323)
DNA (495bp) protein (165aa)
Lysine--tRNA ligase {ECO:0000256|HAMAP-Rule:MF_00252, ECO:0000256|RuleBase:RU000336}; EC=6.1.1.6 {ECO:0000256|HAMAP-Rule:MF_00252, ECO:0000256|RuleBase:RU000336};; Lysyl-tRNA synthetase {ECO:0000256|HAMAP-Rule:MF_00252}; TaxID=1263067 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium; environmental samples.;" source="Clostridium hathewayi CAG:224.;"
lysS; lysyl-tRNA synthetase (EC:6.1.1.6)
Lysine--tRNA ligase n=2 Tax=Clostridium RepID=R5TQH4_9CLOT
L3_102_363G1_scaffold_182_14
Anaerotruncus colihominis, Anaerotruncus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

10736..11896
DNA (1161bp) protein (387aa)
Uncharacterized protein n=1 Tax=Anaerotruncus colihominis DSM 17241 RepID=B0PCP6_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:EDS10750.1}; TaxID=445972 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Anaerotruncus.;" source="Anaerotruncus colihominis DSM 17241.;"
hypothetical protein
L3_102_363G1_scaffold_182_15
Clostridium sp. M62/1, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

11893..12444
DNA (552bp) protein (184aa)
Uncharacterized protein n=2 Tax=Clostridiales RepID=B0PCP7_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:EFE14376.1}; TaxID=411486 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium sp. M62/1.;"
hypothetical protein
L3_102_363G1_scaffold_182_16
Clostridium sp. M62/1, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

12695..13096
DNA (402bp) protein (134aa)
Putative uncharacterized protein n=1 Tax=Clostridium symbiosum WAL-14163 RepID=E7GK39_CLOSY
Uncharacterized protein {ECO:0000313|EMBL:EFE14374.1}; TaxID=411486 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium sp. M62/1.;"
hypothetical protein
L3_102_363G1_scaffold_182_17
[Clostridium] symbiosum, Lachnoclostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

13137..13847
DNA (711bp) protein (237aa)
Uncharacterized protein n=2 Tax=Clostridiales RepID=B0PCQ0_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:EGA94934.1}; TaxID=742740 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae.;" source="[Clostridium] symbiosum WAL-14163.;"
hypothetical protein
L3_102_363G1_scaffold_182_18
Anaerotruncus colihominis, Anaerotruncus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

13861..14856
DNA (996bp) protein (332aa)
Uncharacterized protein n=1 Tax=Anaerotruncus colihominis DSM 17241 RepID=B0PCQ1_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:EDS10755.1}; TaxID=445972 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Anaerotruncus.;" source="Anaerotruncus colihominis DSM 17241.;"
hypothetical protein
L3_102_363G1_scaffold_182_19
Anaerotruncus colihominis, Anaerotruncus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

14857..16233
DNA (1377bp) protein (459aa)
Uncharacterized protein n=1 Tax=Anaerotruncus colihominis DSM 17241 RepID=B0PCQ2_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:EDS10756.1}; TaxID=445972 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Anaerotruncus.;" source="Anaerotruncus colihominis DSM 17241.;"
hypothetical protein
L3_102_363G1_scaffold_182_20
Anaerotruncus colihominis, Anaerotruncus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

16267..19323
DNA (3057bp) protein (1019aa)
Uncharacterized protein n=1 Tax=Anaerotruncus colihominis DSM 17241 RepID=B0PCQ3_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:EDS10757.1}; TaxID=445972 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Anaerotruncus.;" source="Anaerotruncus colihominis DSM 17241.;"
hypothetical protein
L3_102_363G1_scaffold_182_21
Clostridium sp. M62/1, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

19517..20044
DNA (528bp) protein (176aa)
Uncharacterized protein n=2 Tax=Clostridiales RepID=B0PCQ5_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:EFE14369.1}; TaxID=411486 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium sp. M62/1.;"
hypothetical protein
L3_102_363G1_scaffold_182_22
Clostridium sp. M62/1, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

20045..20707
DNA (663bp) protein (221aa)
Uncharacterized protein n=2 Tax=Clostridiales RepID=B0PCQ6_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:EFE14368.1}; TaxID=411486 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium sp. M62/1.;"
hypothetical protein
L3_102_363G1_scaffold_182_23
Anaerotruncus colihominis, Anaerotruncus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

20880..21965
DNA (1086bp) protein (362aa)
Uncharacterized protein n=1 Tax=Anaerotruncus colihominis DSM 17241 RepID=B0PCQ7_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:EDS10761.1}; TaxID=445972 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Anaerotruncus.;" source="Anaerotruncus colihominis DSM 17241.;"
L3_102_363G1_scaffold_182_24
Anaerotruncus colihominis, Anaerotruncus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

22052..23917
DNA (1866bp) protein (622aa)
TraG/TraD family protein n=1 Tax=Anaerotruncus colihominis DSM 17241 RepID=B0PCQ8_9FIRM
TraG/TraD family protein {ECO:0000313|EMBL:EDS10762.1}; TaxID=445972 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Anaerotruncus.;" source="Anaerotruncus colihominis DSM 17241.;"
Type IV secretory pathway, VirD4 components
L3_102_363G1_scaffold_182_25
Anaerotruncus colihominis, Anaerotruncus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

23952..25448
DNA (1497bp) protein (499aa)
S1 RNA binding domain protein n=1 Tax=Anaerotruncus colihominis DSM 17241 RepID=B0PCQ9_9FIRM
S1 RNA binding domain protein {ECO:0000313|EMBL:EDS10763.1}; TaxID=445972 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Anaerotruncus.;" source="Anaerotruncus colihominis DSM 17241.;"
hypothetical protein
L3_102_363G1_scaffold_182_26
Anaerotruncus colihominis, Anaerotruncus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

25643..26839
DNA (1197bp) protein (399aa)
Uncharacterized protein n=1 Tax=Anaerotruncus colihominis DSM 17241 RepID=B0PCR0_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:EDS10764.1}; TaxID=445972 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Anaerotruncus.;" source="Anaerotruncus colihominis DSM 17241.;"
hypothetical protein
L3_102_363G1_scaffold_182_27
Anaerotruncus colihominis, Anaerotruncus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

26841..27488
DNA (648bp) protein (216aa)
Uncharacterized protein n=1 Tax=Anaerotruncus colihominis DSM 17241 RepID=B0PCR1_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:EDS10765.1}; TaxID=445972 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Anaerotruncus.;" source="Anaerotruncus colihominis DSM 17241.;"
hypothetical protein
L3_102_363G1_scaffold_182_28
Anaerotruncus colihominis, Anaerotruncus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

27612..28103
DNA (492bp) protein (164aa)
Uncharacterized protein n=1 Tax=Anaerotruncus colihominis DSM 17241 RepID=B0PCR3_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:EDS10767.1}; TaxID=445972 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Anaerotruncus.;" source="Anaerotruncus colihominis DSM 17241.;"
L3_102_363G1_scaffold_182_29
Anaerotruncus colihominis, Anaerotruncus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

28112..28612
DNA (501bp) protein (167aa)
Uncharacterized protein n=1 Tax=Anaerotruncus colihominis DSM 17241 RepID=B0PCR4_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:EDS10768.1}; TaxID=445972 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Anaerotruncus.;" source="Anaerotruncus colihominis DSM 17241.;"
L3_102_363G1_scaffold_182_30
Anaerotruncus colihominis, Anaerotruncus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

28687..29256
DNA (570bp) protein (190aa)
Uncharacterized protein n=1 Tax=Anaerotruncus colihominis DSM 17241 RepID=B0PCR5_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:EDS10769.1}; TaxID=445972 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Anaerotruncus.;" source="Anaerotruncus colihominis DSM 17241.;"
Displaying items 1-30 of 63 in total

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