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L3_102_363G1_scaffold_244

Search features with annotation key words

Displaying items 1-30 of 54 in total
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
L3_102_363G1_scaffold_244_1
Eubacterium rectale, Eubacterium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(97..273)
DNA (177bp) protein (59aa)
Putative uncharacterized protein n=2 Tax=Eubacterium rectale RepID=C4ZEB1_EUBR3
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:CBK92625.1}; TaxID=657317 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Eubacteriaceae; Eubacterium.;" source="Eubacterium rectale M104/1.;"
L3_102_363G1_scaffold_244_2
Eubacterium rectale, Eubacterium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(434..1726)
DNA (1293bp) protein (431aa)
Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase n=1 Tax=Eubacterium rectale DSM 17629 RepID=D6DYX2_9FIRM
Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase.
Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase {ECO:0000313|EMBL:CBK91785.1}; TaxID=657318 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Eubacteriaceae; Eubacterium.;" source="Eubacterium rectale DSM 17629.;"
L3_102_363G1_scaffold_244_3
Eubacterium rectale, Eubacterium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(1735..2469)
DNA (735bp) protein (245aa)
Response regulator of the LytR/AlgR family n=1 Tax=Eubacterium rectale DSM 17629 RepID=D6DYX1_9FIRM
Response regulator of the LytR/AlgR family
Response regulator of the LytR/AlgR family {ECO:0000313|EMBL:CBK91784.1}; TaxID=657318 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Eubacteriaceae; Eubacterium.;" source="Eubacterium rectale DSM 17629.;"
L3_102_363G1_scaffold_244_4
unknown

Not on your lists

comp(2631..2876)
DNA (246bp) protein (82aa)

This feature has no annotations

L3_102_363G1_scaffold_244_5
Roseburia intestinalis, Roseburia, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(3284..3538)
DNA (255bp) protein (85aa)
Uncharacterized protein n=2 Tax=root RepID=C7GGP3_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:EEU98977.1}; TaxID=536231 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Roseburia.;" source="Roseburia intestinalis L1-82.;"
HTH domain-containing protein
L3_102_363G1_scaffold_244_6
Roseburia intestinalis, Roseburia, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(3547..5337)
DNA (1791bp) protein (597aa)
TraG/TraD family protein n=1 Tax=Roseburia intestinalis L1-82 RepID=C7GGP2_9FIRM
TraG/TraD family protein {ECO:0000313|EMBL:EEU98976.1}; TaxID=536231 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Roseburia.;" source="Roseburia intestinalis L1-82.;"
Type IV secretory pathway, VirD4 components
L3_102_363G1_scaffold_244_7
Roseburia inulinivorans, Roseburia, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(5322..6872)
DNA (1551bp) protein (517aa)
Uncharacterized protein n=1 Tax=Roseburia inulinivorans DSM 16841 RepID=C0FRA4_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:EEG94844.1}; TaxID=622312 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Roseburia.;" source="Roseburia inulinivorans DSM 16841.;"
CDGSH-type zinc finger protein
L3_102_363G1_scaffold_244_8
Roseburia intestinalis, Roseburia, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(6912..9722)
DNA (2811bp) protein (937aa)
Sel1 repeat n=1 Tax=Roseburia intestinalis XB6B4 RepID=D4KXV9_9FIRM
Sel1 repeat {ECO:0000313|EMBL:CBL12199.1}; TaxID=718255 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Roseburia.;" source="Roseburia intestinalis XB6B4.;"
Sel1 repeat.
L3_102_363G1_scaffold_244_9
Roseburia intestinalis, Roseburia, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(9733..11223)
DNA (1491bp) protein (497aa)
Uncharacterized protein n=1 Tax=Roseburia intestinalis L1-82 RepID=C7GBD9_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:EEV00888.1}; TaxID=536231 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Roseburia.;" source="Roseburia intestinalis L1-82.;"
hypothetical protein
L3_102_363G1_scaffold_244_10
Roseburia intestinalis, Roseburia, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(11311..11730)
DNA (420bp) protein (140aa)
Toxin-antitoxin system, toxin component, PIN family n=1 Tax=Roseburia intestinalis L1-82 RepID=C7GBD8_9FIRM
Toxin-antitoxin system, toxin component, PIN family {ECO:0000313|EMBL:EEV00887.1}; TaxID=536231 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Roseburia.;" source="Roseburia intestinalis L1-82.;"
hypothetical protein
L3_102_363G1_scaffold_244_11
Roseburia intestinalis, Roseburia, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(11714..11959)
DNA (246bp) protein (82aa)
Uncharacterized protein n=3 Tax=Clostridiales RepID=C7GBD7_9FIRM
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:CBL12201.1}; TaxID=718255 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Roseburia.;" source="Roseburia intestinalis XB6B4.;"
L3_102_363G1_scaffold_244_12
Roseburia intestinalis, Roseburia, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(12023..12427)
DNA (405bp) protein (135aa)
Putative uncharacterized protein n=1 Tax=Roseburia intestinalis XB6B4 RepID=D4KXW2_9FIRM
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:CBL12202.1}; TaxID=718255 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Roseburia.;" source="Roseburia intestinalis XB6B4.;"
L3_102_363G1_scaffold_244_13
Roseburia intestinalis, Roseburia, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(12442..13020)
DNA (579bp) protein (193aa)
Uncharacterized protein n=1 Tax=Roseburia intestinalis L1-82 RepID=C7GBD5_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:EEV00884.1}; TaxID=536231 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Roseburia.;" source="Roseburia intestinalis L1-82.;"
hypothetical protein
L3_102_363G1_scaffold_244_14
Roseburia intestinalis, Roseburia, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(13022..13651)
DNA (630bp) protein (210aa)
Site-specific DNA methylase (EC:2.1.1.37)
Uncharacterized protein n=1 Tax=Roseburia intestinalis L1-82 RepID=C7GBD4_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:EEV00883.1}; TaxID=536231 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Roseburia.;" source="Roseburia intestinalis L1-82.;"
L3_102_363G1_scaffold_244_15
Roseburia intestinalis, Roseburia, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(14162..14524)
DNA (363bp) protein (121aa)
Uncharacterized protein n=2 Tax=Roseburia RepID=C0FRB2_9FIRM
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:CBL10987.1}; TaxID=718255 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Roseburia.;" source="Roseburia intestinalis XB6B4.;"
L3_102_363G1_scaffold_244_16
Roseburia inulinivorans, Roseburia, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(14539..14793)
DNA (255bp) protein (85aa)
Uncharacterized protein n=2 Tax=Roseburia RepID=C0FRB3_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:EEG94853.1}; TaxID=622312 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Roseburia.;" source="Roseburia inulinivorans DSM 16841.;"
hypothetical protein
L3_102_363G1_scaffold_244_17
Roseburia inulinivorans, Roseburia, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(14850..15224)
DNA (375bp) protein (125aa)
Uncharacterized protein n=1 Tax=Roseburia inulinivorans DSM 16841 RepID=C0FRB4_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:EEG94854.1}; TaxID=622312 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Roseburia.;" source="Roseburia inulinivorans DSM 16841.;"
hypothetical protein
L3_102_363G1_scaffold_244_18
Roseburia inulinivorans, Roseburia, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(15278..15946)
DNA (669bp) protein (223aa)
Uncharacterized protein n=1 Tax=Roseburia inulinivorans DSM 16841 RepID=C0FRB5_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:EEG94855.1}; TaxID=622312 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Roseburia.;" source="Roseburia inulinivorans DSM 16841.;"
hypothetical protein
L3_102_363G1_scaffold_244_19
Roseburia intestinalis, Roseburia, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(15956..16309)
DNA (354bp) protein (118aa)
Putative uncharacterized protein n=1 Tax=Roseburia intestinalis XB6B4 RepID=D4KUE9_9FIRM
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:CBL10989.1}; TaxID=718255 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Roseburia.;" source="Roseburia intestinalis XB6B4.;"
L3_102_363G1_scaffold_244_20
Roseburia intestinalis, Roseburia, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(16371..17456)
DNA (1086bp) protein (362aa)
NlpC/P60 family protein n=1 Tax=Roseburia intestinalis L1-82 RepID=C7GBC7_9FIRM
NlpC/P60 family protein {ECO:0000313|EMBL:EEV00876.1}; TaxID=536231 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Roseburia.;" source="Roseburia intestinalis L1-82.;"
Cell wall-associated hydrolases (invasion-associated proteins)
L3_102_363G1_scaffold_244_21
Roseburia intestinalis, Roseburia, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(17432..17941)
DNA (510bp) protein (170aa)
AIG2-like family n=2 Tax=Roseburia RepID=D4KUF2_9FIRM
AIG2-like family.
AIG2-like family {ECO:0000313|EMBL:CBL10992.1}; TaxID=718255 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Roseburia.;" source="Roseburia intestinalis XB6B4.;"
L3_102_363G1_scaffold_244_22
Roseburia intestinalis, Roseburia, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(17972..18991)
DNA (1020bp) protein (340aa)
Uncharacterized protein n=1 Tax=Roseburia intestinalis L1-82 RepID=C7GBC5_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:EEV00874.1}; TaxID=536231 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Roseburia.;" source="Roseburia intestinalis L1-82.;"
Putative amidoligase enzyme.
L3_102_363G1_scaffold_244_23
Roseburia intestinalis, Roseburia, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(19024..20859)
DNA (1836bp) protein (612aa)
Uncharacterized protein n=1 Tax=Roseburia intestinalis L1-82 RepID=C7GBC4_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:EEV00873.1}; TaxID=536231 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Roseburia.;" source="Roseburia intestinalis L1-82.;"
Domain of unknown function DUF87.
L3_102_363G1_scaffold_244_24
Roseburia intestinalis, Roseburia, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(20852..21424)
DNA (573bp) protein (191aa)
Uncharacterized protein n=2 Tax=Roseburia RepID=C0FRC2_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:EEV00872.1}; TaxID=536231 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Roseburia.;" source="Roseburia intestinalis L1-82.;"
hypothetical protein
L3_102_363G1_scaffold_244_25
Roseburia intestinalis, Roseburia, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(21408..21686)
DNA (279bp) protein (93aa)
Uncharacterized protein n=1 Tax=Roseburia intestinalis L1-82 RepID=C7GBC2_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:EEV00871.1}; TaxID=536231 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Roseburia.;" source="Roseburia intestinalis L1-82.;"
hypothetical protein
L3_102_363G1_scaffold_244_26
Roseburia intestinalis, Roseburia, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(21667..23181)
DNA (1515bp) protein (505aa)
DNA (Cytosine-5-)-methyltransferase {ECO:0000313|EMBL:EEV00870.1}; EC=2.1.1.37 {ECO:0000313|EMBL:EEV00870.1};; TaxID=536231 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Roseburia.;" source="Roseburia intestinalis L1-82.;"
Cytosine-specific methyltransferase n=1 Tax=Roseburia intestinalis L1-82 RepID=C7GBC1_9FIRM
DNA-methyltransferase (dcm)
L3_102_363G1_scaffold_244_27
Roseburia intestinalis, Roseburia, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(23194..24054)
DNA (861bp) protein (287aa)
Uncharacterized protein n=1 Tax=Roseburia intestinalis L1-82 RepID=C7GBC0_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:EEV00869.1}; TaxID=536231 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Roseburia.;" source="Roseburia intestinalis L1-82.;"
hypothetical protein
L3_102_363G1_scaffold_244_28
Roseburia inulinivorans, Roseburia, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(24080..24418)
DNA (339bp) protein (113aa)
Uncharacterized protein n=3 Tax=root RepID=C0FRC6_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:EEG94866.1}; TaxID=622312 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Roseburia.;" source="Roseburia inulinivorans DSM 16841.;"
hypothetical protein
L3_102_363G1_scaffold_244_29
Roseburia intestinalis, Roseburia, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(24448..24915)
DNA (468bp) protein (156aa)
Uncharacterized protein n=1 Tax=Roseburia intestinalis L1-82 RepID=C7GBB8_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:EEV00867.1}; TaxID=536231 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Roseburia.;" source="Roseburia intestinalis L1-82.;"
hypothetical protein
L3_102_363G1_scaffold_244_30
Roseburia inulinivorans, Roseburia, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(24923..26692)
DNA (1770bp) protein (590aa)
Uncharacterized protein n=1 Tax=Roseburia inulinivorans DSM 16841 RepID=C0FRC8_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:EEG94868.1}; TaxID=622312 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Roseburia.;" source="Roseburia inulinivorans DSM 16841.;"
hypothetical protein
Displaying items 1-30 of 54 in total

View Taxonomy