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L3_102_363G1_scaffold_259

Search features with annotation key words

Displaying items 1-30 of 43 in total
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
L3_102_363G1_scaffold_259_1
Bifidobacterium scardovii, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(554..1828)
DNA (1275bp) protein (425aa)
Bifidobacterium scardovii JCM 12489 = DSM 13734 DNA, complete genome {ECO:0000313|EMBL:BAQ32357.1}; TaxID=1150461 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium scardovii JCM 12489 = DSM 13734.;"
L3_102_363G1_scaffold_259_2
Bifidobacterium scardovii, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(1881..2438)
DNA (558bp) protein (186aa)
Bifidobacterium scardovii JCM 12489 = DSM 13734 DNA, complete genome {ECO:0000313|EMBL:BAQ32358.1}; TaxID=1150461 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium scardovii JCM 12489 = DSM 13734.;"
L3_102_363G1_scaffold_259_3
Bifidobacterium scardovii, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(2438..3547)
DNA (1110bp) protein (370aa)
Bifidobacterium scardovii JCM 12489 = DSM 13734 DNA, complete genome {ECO:0000313|EMBL:BAQ32359.1}; TaxID=1150461 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium scardovii JCM 12489 = DSM 13734.;"
L3_102_363G1_scaffold_259_4
Bifidobacterium stellenboschense, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(3547..4026)
DNA (480bp) protein (160aa)
Uncharacterized protein {ECO:0000313|EMBL:KFI97054.1}; TaxID=762211 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium stellenboschense.;"
L3_102_363G1_scaffold_259_5
Bifidobacterium scardovii, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(4026..4436)
DNA (411bp) protein (137aa)
Bifidobacterium scardovii JCM 12489 = DSM 13734 DNA, complete genome {ECO:0000313|EMBL:BAQ32361.1}; TaxID=1150461 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium scardovii JCM 12489 = DSM 13734.;"
L3_102_363G1_scaffold_259_6
Bifidobacterium scardovii, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(4605..6104)
DNA (1500bp) protein (500aa)
SPFH domain/Band 7 family protein n=1 Tax=Streptococcus mitis SK575 RepID=I0SXH9_STRMT
Bifidobacterium scardovii JCM 12489 = DSM 13734 DNA, complete genome {ECO:0000313|EMBL:BAQ32362.1}; TaxID=1150461 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium scardovii JCM 12489 = DSM 13734.;"
antifreeze protein type I
L3_102_363G1_scaffold_259_7
Bifidobacterium bifidum CAG:234, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(6483..6959)
DNA (477bp) protein (159aa)
Acetyltransferase (GNAT) family n=2 Tax=Bifidobacterium RepID=E3ELG6_BIFBS
GNAT family acetyltransferase
Acetyltransferase (GNAT) family {ECO:0000313|EMBL:CDB23022.1}; TaxID=1263058 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium; environmental samples.;" source="Bifidobacterium bifidum CAG:234.;"
L3_102_363G1_scaffold_259_8
Bifidobacterium bifidum, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(6977..7612)
DNA (636bp) protein (212aa)
bloH; carboxylesterase (EC:3.1.1.1)
Carboxylesterase n=1 Tax=Bifidobacterium bifidum LMG 13195 RepID=K2I7X6_BIFBI
Carboxylesterase {ECO:0000313|EMBL:EKE51014.1}; TaxID=1207542 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium bifidum LMG 13195.;"
L3_102_363G1_scaffold_259_9
Bifidobacterium bifidum, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(7847..8179)
DNA (333bp) protein (111aa)
UPF0145 protein B216_02942 n=1 Tax=Bifidobacterium bifidum LMG 13195 RepID=K2IQG1_BIFBI
UPF0145 protein B216_02942 {ECO:0000256|HAMAP-Rule:MF_00338}; TaxID=1207542 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium bifidum LMG 13195.;"
hypothetical protein
L3_102_363G1_scaffold_259_10
unknown

Not on your lists

comp(8176..8379)
DNA (204bp) protein (68aa)

This feature has no annotations

L3_102_363G1_scaffold_259_11
Bifidobacterium bifidum, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

8531..8929
DNA (399bp) protein (133aa)
DivIVA domain protein n=2 Tax=Bifidobacterium bifidum RepID=E4VAQ5_BIFBI
DivIVA domain protein {ECO:0000313|EMBL:EFR49493.1}; TaxID=398513 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium bifidum NCIMB 41171.;"
hypothetical protein
L3_102_363G1_scaffold_259_12
Bifidobacterium bifidum, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

9146..9595
DNA (450bp) protein (150aa)
Mutator mutT protein n=3 Tax=Bifidobacterium bifidum RepID=U2CJV5_BIFBI
MutT/nudix family protein {ECO:0000313|EMBL:EKF14909.1}; TaxID=1207543 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium bifidum IPLA 20015.;"
MutT/nudix family protein
L3_102_363G1_scaffold_259_13
Bifidobacterium bifidum, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

9592..12777
DNA (3186bp) protein (1062aa)
Putative ATP-dependent helicase n=1 Tax=Bifidobacterium bifidum BGN4 RepID=I3WFN6_BIFBI
putative ATP-dependent helicase
Putative ATP-dependent helicase {ECO:0000313|EMBL:AFL03699.1}; TaxID=484020 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium bifidum BGN4.;"
L3_102_363G1_scaffold_259_14
Bifidobacterium bifidum, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

13127..13627
DNA (501bp) protein (167aa)
Uncharacterized protein n=4 Tax=Bifidobacterium bifidum RepID=I3WFN5_BIFBI
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:KFI42229.1}; TaxID=1681 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium bifidum.;"
L3_102_363G1_scaffold_259_15
Bifidobacterium bifidum, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(13632..14636)
DNA (1005bp) protein (335aa)
msrAB; peptide methionine sulfoxide reductase (EC:1.8.4.12)
Peptide methionine sulfoxide reductase n=4 Tax=Bifidobacterium RepID=I3WFN4_BIFBI
Bifunctional methionine sulfoxide reductase {ECO:0000313|EMBL:BAQ97318.1}; TaxID=500634 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium bifidum ATCC 29521 = JCM 1255 = DSM 20456.;"
L3_102_363G1_scaffold_259_16
Bifidobacterium bifidum, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(14738..15265)
DNA (528bp) protein (176aa)
Uncharacterized protein n=2 Tax=Bifidobacterium bifidum RepID=E4VAQ0_BIFBI
Uncharacterized protein {ECO:0000313|EMBL:EFR49488.1}; TaxID=398513 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium bifidum NCIMB 41171.;"
hypothetical protein
L3_102_363G1_scaffold_259_17
Bifidobacterium bifidum, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(15317..16072)
DNA (756bp) protein (252aa)
Uncharacterized protein n=1 Tax=Bifidobacterium bifidum IPLA 20015 RepID=K2LAD3_BIFBI
Uncharacterized protein {ECO:0000313|EMBL:EKF14904.1}; TaxID=1207543 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium bifidum IPLA 20015.;"
hypothetical protein
L3_102_363G1_scaffold_259_18
Bifidobacterium bifidum, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(16336..17310)
DNA (975bp) protein (325aa)
Permease n=1 Tax=Bifidobacterium bifidum LMG 13195 RepID=K2HU27_BIFBI
Permease {ECO:0000313|EMBL:EKE51023.1}; TaxID=1207542 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium bifidum LMG 13195.;"
permease
L3_102_363G1_scaffold_259_19
Bifidobacterium bifidum, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(17346..18395)
DNA (1050bp) protein (350aa)
PldB Lysophospholipase L2 {ECO:0000313|EMBL:KFI42224.1}; EC=3.1.1.5 {ECO:0000313|EMBL:KFI42224.1};; TaxID=1681 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium bifidum.;"
PldB Lysophospholipase n=1 Tax=Bifidobacterium bifidum (strain S17) RepID=E3ELF5_BIFBS
pldB Lysophospholipase
L3_102_363G1_scaffold_259_20
Bifidobacterium bifidum, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(18555..20882)
DNA (2328bp) protein (776aa)
ABC transporter n=1 Tax=Bifidobacterium bifidum LMG 13195 RepID=K2IQH2_BIFBI
pip; pip4 phage infection protein
ABC transporter {ECO:0000313|EMBL:EKE51025.1}; TaxID=1207542 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium bifidum LMG 13195.;"
L3_102_363G1_scaffold_259_21
Bifidobacterium bifidum, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(20879..23689)
DNA (2811bp) protein (937aa)
Pip3 Phage infection protein n=1 Tax=Bifidobacterium bifidum (strain PRL2010) RepID=E4NY71_BIFBP
pip; pip3 phage infection protein
Uncharacterized protein {ECO:0000313|EMBL:BAQ97310.1}; YhgE/Pip domain protein {ECO:0000313|EMBL:ERI84350.1}; TaxID=500634 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium bifidum ATCC 29521 = JCM 1255 = DSM 20456.;"
L3_102_363G1_scaffold_259_22
Bifidobacterium bifidum CAG:234, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(23953..26484)
DNA (2532bp) protein (844aa)
pepX; Xaa-Pro dipeptidase (EC:3.4.14.5)
PepX Xaa-Pro dipeptidyl-peptidase n=5 Tax=Bifidobacterium RepID=E4NY70_BIFBP
PepX Xaa-Pro dipeptidyl-peptidase {ECO:0000313|EMBL:CDB23517.1}; TaxID=1263058 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium; environmental samples.;" source="Bifidobacterium bifidum CAG:234.;"
L3_102_363G1_scaffold_259_23
Bifidobacterium bifidum, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

26724..27425
DNA (702bp) protein (234aa)
FHA domain containing protein n=8 Tax=Bifidobacterium RepID=E3ELF1_BIFBS
FHA domain-containing protein
FHA domain-containing protein {ECO:0000313|EMBL:EKF14860.1}; TaxID=1207543 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium bifidum IPLA 20015.;"
L3_102_363G1_scaffold_259_24
Bifidobacterium bifidum, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

27453..27995
DNA (543bp) protein (181aa)
FHA domain protein n=7 Tax=Bifidobacterium RepID=E4VAP2_BIFBI
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:EKE51029.1}; TaxID=1207542 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium bifidum LMG 13195.;"
L3_102_363G1_scaffold_259_25
Bifidobacterium bifidum, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

28002..29660
DNA (1659bp) protein (553aa)
pp2c; protein phosphatase 2C (EC:3.1.3.16)
Protein phosphatase 2C n=1 Tax=Bifidobacterium bifidum NCIMB 41171 RepID=E4VAP1_BIFBI
Protein phosphatase 2C {ECO:0000313|EMBL:EFR49479.1}; TaxID=398513 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium bifidum NCIMB 41171.;"
L3_102_363G1_scaffold_259_26
Bifidobacterium bifidum, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

29657..31135
DNA (1479bp) protein (493aa)
Protein involved in cell wall formation and stabilization of the FtsZ ring during cell division n=8 Tax=Bifidobacterium RepID=E3EPL6_BIFBS
ftsW; putative cell division protein
FtsW Cell division protein {ECO:0000313|EMBL:KFI42218.1}; TaxID=1681 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium bifidum.;"
L3_102_363G1_scaffold_259_27
Bifidobacterium bifidum, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

31132..32598
DNA (1467bp) protein (489aa)
Penicillin binding transpeptidase n=2 Tax=Bifidobacterium bifidum RepID=E3EPL5_BIFBS
mrdA; penicillin-binding protein
Penicillin binding transpeptidase {ECO:0000313|EMBL:ADO52342.1}; TaxID=883062 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium bifidum (strain S17).;"
L3_102_363G1_scaffold_259_28
Bifidobacterium bifidum, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

32595..33578
DNA (984bp) protein (328aa)
PknA Serine/threonine protein kinase {ECO:0000313|EMBL:KFI42216.1}; EC=2.7.11.1 {ECO:0000313|EMBL:KFI42216.1};; TaxID=1681 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium bifidum.;"
Serine/threonine protein kinase n=6 Tax=Bifidobacterium RepID=E3EPL4_BIFBS
Serine/threonine protein kinase
L3_102_363G1_scaffold_259_29
Bifidobacterium bifidum, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

33581..35638
DNA (2058bp) protein (686aa)
PknB Serine/threonine protein kinase {ECO:0000313|EMBL:KFI42215.1}; EC=2.7.11.1 {ECO:0000313|EMBL:KFI42215.1};; TaxID=1681 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium bifidum.;"
pknB; putative serine/threonine-protein kinase (EC:2.7.11.1)
Kinase domain protein n=3 Tax=Bifidobacterium bifidum RepID=E4VAN7_BIFBI
L3_102_363G1_scaffold_259_30
Bifidobacterium bifidum, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(35866..36510)
DNA (645bp) protein (215aa)
Para-aminobenzoate synthase glutamine amidotransferase component II n=7 Tax=Bifidobacterium bifidum RepID=E3EPL2_BIFBS
pabA; Para-aminobenzoate synthase glutamine amidotransferase component II
Para-aminobenzoate synthase glutamine amidotransferase component II {ECO:0000313|EMBL:ADO52339.1}; TaxID=883062 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium bifidum (strain S17).;"
Displaying items 1-30 of 43 in total

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