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L3_102_363G1_scaffold_281

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Displaying items 1-30 of 36 in total
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
L3_102_363G1_scaffold_281_1
[Ruminococcus] gnavus, Blautia, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

370..936
DNA (567bp) protein (189aa)
Putative manganese efflux pump MntP n=1 Tax=Ruminococcus gnavus ATCC 29149 RepID=A7B023_RUMGN
Putative manganese efflux pump MntP {ECO:0000256|HAMAP-Rule:MF_01521}; TaxID=411470 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Blautia.;" source="Ruminococcus gnavus ATCC 29149.;"
hypothetical protein
L3_102_363G1_scaffold_281_2
[Ruminococcus] gnavus, Blautia, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(1007..3337)
DNA (2331bp) protein (777aa)
Ferrous iron transporter B n=3 Tax=Clostridiales RepID=F7K0Z0_9FIRM
Ferrous iron transporter B {ECO:0000313|EMBL:ETD15876.1}; TaxID=1073375 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Blautia.;" source="Ruminococcus gnavus CC55_001C.;"
ferrous iron transporter FeoB
L3_102_363G1_scaffold_281_3
Lachnospiraceae bacterium 2_1_58FAA, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(3456..5213)
DNA (1758bp) protein (586aa)
1-deoxy-D-xylulose-5-phosphate synthase {ECO:0000256|SAAS:SAAS00085897}; EC=2.2.1.7 {ECO:0000256|SAAS:SAAS00085897};; TaxID=658082 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae.;" source="Lachnospiraceae bacterium 2_1_58FAA.;"
1-deoxy-D-xylulose-5-phosphate synthase n=3 Tax=Lachnospiraceae RepID=V8BM78_RUMGN
1-deoxy-D-xylulose-5-phosphate synthase
L3_102_363G1_scaffold_281_4
[Ruminococcus] gnavus, Blautia, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(5435..5887)
DNA (453bp) protein (151aa)
Uncharacterized protein n=4 Tax=Clostridiales RepID=A7B020_RUMGN
Uncharacterized protein {ECO:0000313|EMBL:ETD15878.1}; TaxID=1073375 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Blautia.;" source="Ruminococcus gnavus CC55_001C.;"
Protein of unknown function (DUF1653).
L3_102_363G1_scaffold_281_5
[Ruminococcus] gnavus, Blautia, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(5905..6150)
DNA (246bp) protein (82aa)
Uncharacterized protein n=1 Tax=Ruminococcus gnavus ATCC 29149 RepID=A7B019_RUMGN
Uncharacterized protein {ECO:0000313|EMBL:EDN78732.1}; TaxID=411470 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Blautia.;" source="Ruminococcus gnavus ATCC 29149.;"
L3_102_363G1_scaffold_281_6
[Ruminococcus] gnavus, Blautia, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(6163..6435)
DNA (273bp) protein (91aa)
Uncharacterized protein n=1 Tax=Ruminococcus gnavus ATCC 29149 RepID=A7B018_RUMGN
Uncharacterized protein {ECO:0000313|EMBL:EDN78731.1}; TaxID=411470 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Blautia.;" source="Ruminococcus gnavus ATCC 29149.;"
hypothetical protein
L3_102_363G1_scaffold_281_7
Lachnospiraceae bacterium 2_1_58FAA, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(6565..6759)
DNA (195bp) protein (65aa)
Uncharacterized protein n=3 Tax=Clostridiales RepID=R5TLK4_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:EGN44362.1}; TaxID=658082 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae.;" source="Lachnospiraceae bacterium 2_1_58FAA.;"
PAS/PAC sensor-containing diguanylate cyclase/phosphodiesterase
L3_102_363G1_scaffold_281_8
[Ruminococcus] gnavus, Blautia, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(6893..7543)
DNA (651bp) protein (217aa)
Ribulose-phosphate 3-epimerase (EC:5.1.3.1)
Putative ribulose-phosphate 3-epimerase n=1 Tax=Ruminococcus gnavus ATCC 29149 RepID=A7B016_RUMGN
Putative ribulose-phosphate 3-epimerase {ECO:0000313|EMBL:EDN78729.1}; TaxID=411470 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Blautia.;" source="Ruminococcus gnavus ATCC 29149.;"
L3_102_363G1_scaffold_281_9
[Ruminococcus] gnavus, Blautia, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(7557..8729)
DNA (1173bp) protein (391aa)
TRAP transporter, DctM subunit n=1 Tax=Ruminococcus gnavus ATCC 29149 RepID=A7B015_RUMGN
TRAP transporter, DctM subunit {ECO:0000313|EMBL:EDN78728.1}; TaxID=411470 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Blautia.;" source="Ruminococcus gnavus ATCC 29149.;"
permease large protein, C4-dicarboxylate transport system
L3_102_363G1_scaffold_281_10
[Ruminococcus] gnavus, Blautia, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(9035..9910)
DNA (876bp) protein (292aa)
Uncharacterized protein n=1 Tax=Ruminococcus gnavus ATCC 29149 RepID=A7B013_RUMGN
Uncharacterized protein {ECO:0000313|EMBL:EDN78726.1}; TaxID=411470 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Blautia.;" source="Ruminococcus gnavus ATCC 29149.;"
hypothetical protein
L3_102_363G1_scaffold_281_11
[Ruminococcus] gnavus, Blautia, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(9919..11205)
DNA (1287bp) protein (429aa)
Serine--tRNA ligase {ECO:0000313|EMBL:EDN78725.1}; EC=6.1.1.11 {ECO:0000313|EMBL:EDN78725.1};; TaxID=411470 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Blautia.;" source="Ruminococcus gnavus ATCC 29149.;"
seryl-tRNA synthetase (EC:6.1.1.11)
Serine--tRNA ligase n=1 Tax=Ruminococcus gnavus ATCC 29149 RepID=A7B012_RUMGN
L3_102_363G1_scaffold_281_12
Lachnospiraceae bacterium 2_1_58FAA, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(11231..11710)
DNA (480bp) protein (160aa)
Uncharacterized protein n=3 Tax=Lachnospiraceae RepID=A7B011_RUMGN
Uncharacterized protein {ECO:0000313|EMBL:EGN44368.1}; TaxID=658082 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae.;" source="Lachnospiraceae bacterium 2_1_58FAA.;"
hypothetical protein
L3_102_363G1_scaffold_281_13
[Ruminococcus] gnavus, Blautia, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(11746..12654)
DNA (909bp) protein (303aa)
ParB-like protein n=2 Tax=Clostridiales RepID=A7B010_RUMGN
ParB-like protein {ECO:0000313|EMBL:EDN78723.1}; TaxID=411470 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Blautia.;" source="Ruminococcus gnavus ATCC 29149.;"
ParB-like partition proteins
L3_102_363G1_scaffold_281_14
Lachnospiraceae bacterium 2_1_58FAA, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(12656..13423)
DNA (768bp) protein (256aa)
CobQ/CobB/MinD/ParA nucleotide binding domain protein n=4 Tax=Clostridiales RepID=A7B009_RUMGN
Uncharacterized protein {ECO:0000313|EMBL:EGN44370.1}; TaxID=658082 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae.;" source="Lachnospiraceae bacterium 2_1_58FAA.;"
ATPases involved in chromosome partitioning
L3_102_363G1_scaffold_281_15
Lachnospiraceae bacterium 2_1_58FAA, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

13702..14685
DNA (984bp) protein (328aa)
Uncharacterized protein n=2 Tax=Lachnospiraceae RepID=V8BL84_RUMGN
Uncharacterized protein {ECO:0000313|EMBL:EGN44371.1}; TaxID=658082 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae.;" source="Lachnospiraceae bacterium 2_1_58FAA.;"
alpha/beta fold family hydrolase
L3_102_363G1_scaffold_281_16
Lachnospiraceae bacterium 2_1_58FAA, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(14836..15549)
DNA (714bp) protein (238aa)
Ribosomal RNA small subunit methyltransferase G {ECO:0000256|HAMAP-Rule:MF_00074, ECO:0000256|SAAS:SAAS00095882}; EC=2.1.1.- {ECO:0000256|HAMAP-Rule:MF_00074, ECO:0000256|SAAS:SAAS00277524};; 16S rRNA 7-methylguanosine methyltransferase {ECO:0000256|HAMAP-Rule:MF_00074}; TaxID=658082 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae.;" source="Lachnospiraceae bacterium 2_1_58FAA.;"
16S rRNA m(7)G-527 methyltransferase (EC:2.1.1.- 2.1.-.-)
Ribosomal RNA small subunit methyltransferase G n=4 Tax=Clostridiales RepID=A7B006_RUMGN
L3_102_363G1_scaffold_281_17
Lachnospiraceae bacterium 2_1_58FAA, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(15566..17473)
DNA (1908bp) protein (636aa)
tRNA uridine 5-carboxymethylaminomethyl modification enzyme MnmG n=3 Tax=Lachnospiraceae RepID=A7B005_RUMGN
tRNA uridine 5-carboxymethylaminomethyl modification enzyme MnmG {ECO:0000256|HAMAP-Rule:MF_00129}; Glucose-inhibited division protein A {ECO:0000256|HAMAP-Rule:MF_00129}; TaxID=658082 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae.;" source="Lachnospiraceae bacterium 2_1_58FAA.;"
glucose-inhibited division protein A
L3_102_363G1_scaffold_281_18
[Ruminococcus] gnavus, Blautia, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(17439..18815)
DNA (1377bp) protein (459aa)
tRNA modification GTPase MnmE {ECO:0000256|HAMAP-Rule:MF_00379}; EC=3.6.-.- {ECO:0000256|HAMAP-Rule:MF_00379};; TaxID=411470 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Blautia.;" source="Ruminococcus gnavus ATCC 29149.;"
tRNA modification GTPase MnmE n=1 Tax=Ruminococcus gnavus CAG:126 RepID=R5TLU2_9FIRM
tRNA modification GTPase trmE
L3_102_363G1_scaffold_281_19
[Ruminococcus] gnavus, Blautia, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(18921..19706)
DNA (786bp) protein (262aa)
R3H domain protein n=4 Tax=Clostridiales RepID=A7B003_RUMGN
Uncharacterized protein {ECO:0000313|EMBL:ETD15893.1}; TaxID=1073375 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Blautia.;" source="Ruminococcus gnavus CC55_001C.;"
Predicted RNA-binding protein
L3_102_363G1_scaffold_281_20
[Ruminococcus] gnavus, Blautia, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(19733..21031)
DNA (1299bp) protein (433aa)
Membrane protein insertase, YidC/Oxa1 family n=4 Tax=Clostridiales RepID=A7B002_RUMGN
Uncharacterized protein {ECO:0000313|EMBL:ETD15894.1}; TaxID=1073375 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Blautia.;" source="Ruminococcus gnavus CC55_001C.;"
membrane protein insertase, YidC/Oxa1 family, C-terminal domain
L3_102_363G1_scaffold_281_21
Lachnospiraceae bacterium 2_1_58FAA, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(21044..21280)
DNA (237bp) protein (79aa)
Uncharacterized protein n=4 Tax=Clostridiales RepID=V8BM77_RUMGN
Putative membrane protein insertion efficiency factor {ECO:0000256|HAMAP-Rule:MF_00386, ECO:0000256|SAAS:SAAS00100919}; TaxID=658082 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae.;" source="Lachnospiraceae bacterium 2_1_58FAA.;"
conserved hypothetical protein TIGR00278
L3_102_363G1_scaffold_281_22
[Ruminococcus] gnavus, Blautia, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(21277..21612)
DNA (336bp) protein (112aa)
Ribonuclease P protein component {ECO:0000256|HAMAP-Rule:MF_00227, ECO:0000256|SAAS:SAAS00143752}; Short=RNase P protein {ECO:0000256|HAMAP-Rule:MF_00227};; Short=RNaseP protein {ECO:0000256|HAMAP-Rule:MF_00227};; EC=3.1.26.5 {ECO:0000256|HAMAP-Rule:MF_00227, ECO:0000256|SAAS:SAAS00143815};; Protein C5 {ECO:0000256|HAMAP-Rule:MF_00227}; TaxID=1073375 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Blautia.;" source="Ruminococcus gnavus CC55_001C.;"
ribonuclease P protein component (EC:3.1.26.5)
Ribonuclease P protein component n=4 Tax=Clostridiales RepID=A7B000_RUMGN
L3_102_363G1_scaffold_281_23
[Ruminococcus] gnavus, Blautia, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

22582..23952
DNA (1371bp) protein (457aa)
Chromosomal replication initiator protein DnaA n=4 Tax=Clostridiales RepID=A7AZZ7_RUMGN
Chromosomal replication initiator protein DnaA {ECO:0000256|HAMAP-Rule:MF_00377, ECO:0000256|SAAS:SAAS00009621}; TaxID=411470 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Blautia.;" source="Ruminococcus gnavus ATCC 29149.;"
chromosomal replication initiator protein DnaA
L3_102_363G1_scaffold_281_24
[Ruminococcus] gnavus, Blautia, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

24326..25435
DNA (1110bp) protein (370aa)
DNA polymerase III subunit beta {ECO:0000256|PIRNR:PIRNR000804, ECO:0000256|SAAS:SAAS00018186}; EC=2.7.7.7 {ECO:0000256|PIRNR:PIRNR000804, ECO:0000256|SAAS:SAAS00018259};; TaxID=411470 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Blautia.;" source="Ruminococcus gnavus ATCC 29149.;"
DNA polymerase III, beta subunit (EC:2.7.7.7)
DNA polymerase III subunit beta n=4 Tax=Clostridiales RepID=A7AZZ6_RUMGN
L3_102_363G1_scaffold_281_25
Lachnospiraceae bacterium 2_1_58FAA, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

25450..25665
DNA (216bp) protein (72aa)
Uncharacterized protein n=4 Tax=Clostridiales RepID=A7AZZ5_RUMGN
Uncharacterized protein {ECO:0000313|EMBL:EGN44384.1}; TaxID=658082 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae.;" source="Lachnospiraceae bacterium 2_1_58FAA.;"
hypothetical protein
L3_102_363G1_scaffold_281_26
[Ruminococcus] gnavus, Blautia, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

25707..26792
DNA (1086bp) protein (362aa)
Uncharacterized protein n=1 Tax=Ruminococcus gnavus CC55_001C RepID=V8BN50_RUMGN
DNA replication and repair protein RecF {ECO:0000256|HAMAP-Rule:MF_00365, ECO:0000256|RuleBase:RU000578}; TaxID=1073375 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Blautia.;" source="Ruminococcus gnavus CC55_001C.;"
recF protein
L3_102_363G1_scaffold_281_27
[Ruminococcus] gnavus, Blautia, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

26804..28741
DNA (1938bp) protein (646aa)
DNA gyrase subunit B {ECO:0000256|HAMAP-Rule:MF_01898, ECO:0000256|RuleBase:RU003363}; EC=5.99.1.3 {ECO:0000256|HAMAP-Rule:MF_01898, ECO:0000256|RuleBase:RU003363};; TaxID=1073375 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Blautia.;" source="Ruminococcus gnavus CC55_001C.;"
DNA gyrase subunit B (EC:5.99.1.3)
DNA gyrase subunit B n=4 Tax=Clostridiales RepID=A7AZZ3_RUMGN
L3_102_363G1_scaffold_281_28
Ruminococcus gnavus CAG:126, Ruminococcus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists


28777..31290
DNA (2514bp) protein (838aa)
DNA gyrase subunit A {ECO:0000256|HAMAP-Rule:MF_01897}; EC=5.99.1.3 {ECO:0000256|HAMAP-Rule:MF_01897};; TaxID=1263106 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminococcus; environmental samples.;" source="Ruminococcus gnavus CAG:126.;"
DNA gyrase subunit A (EC:5.99.1.3)
DNA gyrase subunit A n=4 Tax=Clostridiales RepID=A7AZZ2_RUMGN
L3_102_363G1_scaffold_281_29
Lachnospiraceae bacterium 2_1_58FAA, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

31504..32511
DNA (1008bp) protein (336aa)
Uncharacterized protein n=2 Tax=Lachnospiraceae RepID=V8BL97_RUMGN
Uncharacterized protein {ECO:0000313|EMBL:EGN44390.1}; TaxID=658082 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae.;" source="Lachnospiraceae bacterium 2_1_58FAA.;"
IgA Peptidase M64./Fibronectin type III domain.
L3_102_363G1_scaffold_281_30
[Ruminococcus] gnavus, Blautia, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

32665..33510
DNA (846bp) protein (282aa)
hydro-lyases, Fe-S type, tartrate/fumarate subfamily, alpha region (EC:4.2.1.2)
Hydrolyase, tartrate alpha subunit/fumarate domain protein, Fe-S type n=4 Tax=Clostridiales RepID=A7AZZ0_RUMGN
Hydrolyase, tartrate alpha subunit/fumarate domain protein, Fe-S type {ECO:0000313|EMBL:EDN78703.1}; TaxID=411470 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Blautia.;" source="Ruminococcus gnavus ATCC 29149.;"
Displaying items 1-30 of 36 in total

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