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L3_102_363G1_scaffold_332

Search features with annotation key words

Displaying items 1-30 of 35 in total
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
L3_102_363G1_scaffold_332_1
[Eubacterium] hallii, Eubacterium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(57..647)
DNA (591bp) protein (197aa)
Uncharacterized protein n=1 Tax=Eubacterium hallii DSM 3353 RepID=C0ESN4_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:EEG37626.1}; TaxID=411469 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Eubacteriaceae; Eubacterium.;" source="[Eubacterium] hallii DSM 3353.;"
hypothetical protein
L3_102_363G1_scaffold_332_2
[Eubacterium] hallii, Eubacterium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(647..847)
DNA (201bp) protein (67aa)
Uncharacterized protein n=1 Tax=Eubacterium hallii DSM 3353 RepID=C0ESN3_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:EEG37625.1}; TaxID=411469 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Eubacteriaceae; Eubacterium.;" source="[Eubacterium] hallii DSM 3353.;"
L3_102_363G1_scaffold_332_3
Lachnospiraceae bacterium 10-1, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

1041..1496
DNA (456bp) protein (152aa)
Uncharacterized protein n=1 Tax=Lachnospiraceae bacterium 10-1 RepID=R9MXY3_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:EOS75919.1}; TaxID=1235800 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae.;" source="Lachnospiraceae bacterium 10-1.;"
Helix-turn-helix.
L3_102_363G1_scaffold_332_4
[Clostridium] innocuum, Erysipelatoclostridium, Erysipelotrichales, Erysipelotrichia, Firmicutes, Bacteria

Not on your lists

1644..2678
DNA (1035bp) protein (345aa)
Uncharacterized protein n=2 Tax=unclassified Erysipelotrichaceae RepID=G1VL20_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:ENY85986.1}; TaxID=999413 species="Bacteria; Firmicutes; Erysipelotrichia; Erysipelotrichales; Erysipelotrichaceae; Erysipelatoclostridium.;" source="[Clostridium] innocuum 2959.;"
hypothetical protein
L3_102_363G1_scaffold_332_5
unknown

Not on your lists

2792..3547
DNA (756bp) protein (252aa)

This feature has no annotations

L3_102_363G1_scaffold_332_6
Eubacterium sp. CAG:86, Eubacterium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(3844..4341)
DNA (498bp) protein (166aa)
Lincosamide resistance protein n=5 Tax=root RepID=I3WHJ5_BIFBI
linA; lincosamide resistance protein
Lincosamide resistance protein {ECO:0000313|EMBL:CCX82131.1}; TaxID=1262895 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Eubacteriaceae; Eubacterium; environmental samples.;" source="Eubacterium sp. CAG:86.;"
L3_102_363G1_scaffold_332_7
Bifidobacterium bifidum, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(4426..5970)
DNA (1545bp) protein (515aa)
Uncharacterized protein n=4 Tax=Bacteria RepID=S2Y105_9FIRM
yheS; ABC transporter ATP-binding protein
Putative ABC transporter ATP-binding protein {ECO:0000313|EMBL:AFL04359.1}; TaxID=484020 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium bifidum BGN4.;"
L3_102_363G1_scaffold_332_8
Eubacterium sp. CAG:86, Eubacterium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(6424..6801)
DNA (378bp) protein (126aa)
Uncharacterized protein n=3 Tax=Clostridiales RepID=R5E177_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:CCX84954.1}; TaxID=1262895 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Eubacteriaceae; Eubacterium; environmental samples.;" source="Eubacterium sp. CAG:86.;"
hypothetical protein
L3_102_363G1_scaffold_332_9
Eubacterium sp. CAG:86, Eubacterium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(6828..7988)
DNA (1161bp) protein (387aa)
Uncharacterized protein n=3 Tax=Clostridiales RepID=R5DXG9_9FIRM
mob; Mob
Uncharacterized protein {ECO:0000313|EMBL:CCX84955.1}; TaxID=1262895 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Eubacteriaceae; Eubacterium; environmental samples.;" source="Eubacterium sp. CAG:86.;"
L3_102_363G1_scaffold_332_10
Coprococcus sp. HPP0074, Coprococcus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(8323..9477)
DNA (1155bp) protein (385aa)
Uncharacterized protein n=5 Tax=Bacteria RepID=I3WHJ8_BIFBI
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:EPD55992.1}; TaxID=1078090 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Coprococcus.;" source="Coprococcus sp. HPP0074.;"
L3_102_363G1_scaffold_332_11
Bifidobacterium bifidum, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(9467..9802)
DNA (336bp) protein (112aa)
Uncharacterized protein n=5 Tax=Bacteria RepID=I3WHJ9_BIFBI
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:AFL04362.1}; TaxID=484020 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium bifidum BGN4.;"
L3_102_363G1_scaffold_332_12
Eubacterium sp. CAG:86, Eubacterium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(9792..10883)
DNA (1092bp) protein (364aa)
Uncharacterized protein n=1 Tax=Clostridium sp. CAG:127 RepID=R5PAR1_9CLOT
Uncharacterized protein {ECO:0000313|EMBL:CCX84958.1}; TaxID=1262895 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Eubacteriaceae; Eubacterium; environmental samples.;" source="Eubacterium sp. CAG:86.;"
Site-specific recombinase XerD
L3_102_363G1_scaffold_332_13
Lachnospiraceae bacterium CAG:215, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(10884..11072)
DNA (189bp) protein (63aa)
Uncharacterized protein n=5 Tax=Clostridiales RepID=R5E182_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:CDB01243.1}; TaxID=1262985 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; environmental samples.;" source="Lachnospiraceae bacterium CAG:215.;"
hypothetical protein
L3_102_363G1_scaffold_332_14
Coprococcus sp. HPP0074, Coprococcus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

11521..12051
DNA (531bp) protein (177aa)
Uncharacterized protein n=5 Tax=Clostridiales RepID=R5DXH5_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:EPD55988.1}; TaxID=1078090 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Coprococcus.;" source="Coprococcus sp. HPP0074.;"
Helix-turn-helix.
L3_102_363G1_scaffold_332_15
[Ruminococcus] gnavus, Blautia, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(12344..13891)
DNA (1548bp) protein (516aa)
GMP synthase [glutamine-hydrolyzing] {ECO:0000256|HAMAP-Rule:MF_00344, ECO:0000256|SAAS:SAAS00008788}; EC=6.3.5.2 {ECO:0000256|HAMAP-Rule:MF_00344, ECO:0000256|SAAS:SAAS00008728};; GMP synthetase {ECO:0000256|HAMAP-Rule:MF_00344}; Glutamine amidotransferase {ECO:0000256|HAMAP-Rule:MF_00344}; TaxID=1073375 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Blautia.;" source="Ruminococcus gnavus CC55_001C.;"
GMP synthase (glutamine-hydrolyzing), C-terminal domain or B subunit/GMP synthase (glutamine-hydrolyzing), N-terminal domain or A subunit (EC:6.3.5.2)
GMP synthase [glutamine-hydrolyzing] n=4 Tax=Clostridiales RepID=A7B1E4_RUMGN
L3_102_363G1_scaffold_332_16
Lachnospiraceae bacterium 2_1_58FAA, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(14017..15240)
DNA (1224bp) protein (408aa)
Uncharacterized protein n=3 Tax=Lachnospiraceae RepID=A7B1E3_RUMGN
Uncharacterized protein {ECO:0000313|EMBL:EGN43618.1}; TaxID=658082 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae.;" source="Lachnospiraceae bacterium 2_1_58FAA.;"
hypothetical protein
L3_102_363G1_scaffold_332_17
Lachnospiraceae bacterium 2_1_58FAA, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(15233..15703)
DNA (471bp) protein (157aa)
Sigma-70 region 2 n=3 Tax=Lachnospiraceae RepID=A7B1E2_RUMGN
Uncharacterized protein {ECO:0000313|EMBL:EGN43619.1}; TaxID=658082 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae.;" source="Lachnospiraceae bacterium 2_1_58FAA.;"
RNA polymerase sigma factor
L3_102_363G1_scaffold_332_18
Lachnospiraceae bacterium 2_1_58FAA, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(15931..16161)
DNA (231bp) protein (77aa)
Uncharacterized protein n=4 Tax=Clostridiales RepID=A7B1E0_RUMGN
Uncharacterized protein {ECO:0000313|EMBL:EGN43620.1}; TaxID=658082 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae.;" source="Lachnospiraceae bacterium 2_1_58FAA.;"
PTS HPr component phosphorylation site.
L3_102_363G1_scaffold_332_19
Lachnospiraceae bacterium 2_1_58FAA, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(16283..17809)
DNA (1527bp) protein (509aa)
Uncharacterized protein n=2 Tax=Lachnospiraceae RepID=V8BRT9_RUMGN
Uncharacterized protein {ECO:0000313|EMBL:EGN43621.1}; TaxID=658082 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae.;" source="Lachnospiraceae bacterium 2_1_58FAA.;"
AraC family transcriptional regulator
L3_102_363G1_scaffold_332_20
Lachnospiraceae bacterium 2_1_58FAA, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(17797..19515)
DNA (1719bp) protein (573aa)
Uncharacterized protein n=3 Tax=Lachnospiraceae RepID=V8BS16_RUMGN
Uncharacterized protein {ECO:0000313|EMBL:EGN43622.1}; TaxID=658082 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae.;" source="Lachnospiraceae bacterium 2_1_58FAA.;"
integral membrane sensor signal transduction histidine kinase
L3_102_363G1_scaffold_332_21
[Ruminococcus] torques, Blautia, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(19610..21328)
DNA (1719bp) protein (573aa)
Resolvase, N-terminal domain protein n=1 Tax=Ruminococcus torques ATCC 27756 RepID=A5KPH0_9FIRM
Resolvase, N-terminal domain protein {ECO:0000313|EMBL:EDK23646.1}; TaxID=411460 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Blautia.;" source="Ruminococcus torques ATCC 27756.;"
Site-specific recombinases, DNA invertase Pin homologs
L3_102_363G1_scaffold_332_22
[Ruminococcus] torques, Blautia, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(21458..22540)
DNA (1083bp) protein (361aa)
RES domain protein n=1 Tax=Ruminococcus torques ATCC 27756 RepID=A5KPG9_9FIRM
RES domain protein {ECO:0000313|EMBL:EDK23645.1}; TaxID=411460 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Blautia.;" source="Ruminococcus torques ATCC 27756.;"
RES domain-containing protein
L3_102_363G1_scaffold_332_23
[Ruminococcus] torques, Blautia, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(22543..23475)
DNA (933bp) protein (311aa)
Uncharacterized protein n=1 Tax=Ruminococcus torques ATCC 27756 RepID=A5KPG8_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:EDK23644.1}; TaxID=411460 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Blautia.;" source="Ruminococcus torques ATCC 27756.;"
hypothetical protein
L3_102_363G1_scaffold_332_24
[Ruminococcus] torques, Blautia, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(23477..24337)
DNA (861bp) protein (287aa)
Uncharacterized protein n=1 Tax=Ruminococcus torques ATCC 27756 RepID=A5KPG7_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:EDK23643.1}; TaxID=411460 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Blautia.;" source="Ruminococcus torques ATCC 27756.;"
hypothetical protein
L3_102_363G1_scaffold_332_25
Ruminococcus obeum CAG:39, Ruminococcus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(24449..24625)
DNA (177bp) protein (59aa)
Uncharacterized protein n=1 Tax=Ruminococcus obeum CAG:39 RepID=R7D9Y2_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:CDD87046.1}; TaxID=1263107 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminococcus; environmental samples.;" source="Ruminococcus obeum CAG:39.;"
hypothetical protein
L3_102_363G1_scaffold_332_26
Ruminococcus sp. 5_1_39BFAA, Ruminococcus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(25090..26241)
DNA (1152bp) protein (384aa)
Predicted P-loop ATPase and inactivated derivatives n=2 Tax=Clostridiales RepID=D4LQ26_9FIRM
Predicted P-loop ATPase and inactivated derivatives
Uncharacterized protein {ECO:0000313|EMBL:EES76234.2}; TaxID=457412 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminococcus.;" source="Ruminococcus sp. 5_1_39BFAA.;"
L3_102_363G1_scaffold_332_27
Roseburia hominis, Roseburia, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(26195..26905)
DNA (711bp) protein (237aa)
CHC2 zinc finger family protein n=2 Tax=root RepID=T4EFU8_CLODI
DNA primase
DNA primase {ECO:0000313|EMBL:AEN96416.1}; TaxID=585394 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Roseburia.;" source="Roseburia hominis (strain DSM 16839 / NCIMB 14029 / A2-183).;"
L3_102_363G1_scaffold_332_28
Lachnospiraceae bacterium 3_1_46FAA, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(26908..28161)
DNA (1254bp) protein (418aa)
Putative serine/arginine repetitive matrix protein 2 n=2 Tax=Clostridium difficile RepID=T4Q3G3_CLODI
Uncharacterized protein {ECO:0000313|EMBL:EGG88537.1}; TaxID=665950 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae.;" source="Lachnospiraceae bacterium 3_1_46FAA.;"
hypothetical protein
L3_102_363G1_scaffold_332_29
Lachnospiraceae bacterium 5_1_57FAA, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(28398..28607)
DNA (210bp) protein (70aa)
Putative uncharacterized protein n=1 Tax=Lachnospiraceae bacterium 5_1_57FAA RepID=F7KVW5_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:EGN33698.1}; TaxID=658085 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae.;" source="Lachnospiraceae bacterium 5_1_57FAA.;"
hypothetical protein
L3_102_363G1_scaffold_332_30
Lachnospiraceae bacterium A2, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

29075..29884
DNA (810bp) protein (270aa)
Uncharacterized protein n=1 Tax=Lachnospiraceae bacterium A2 RepID=R9KND5_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:EOS47940.1}; TaxID=397290 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae.;" source="Lachnospiraceae bacterium A2.;"
hypothetical protein
Displaying items 1-30 of 35 in total

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