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L3_102_363G1_scaffold_834

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Displaying 12 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
L3_102_363G1_scaffold_834_1
Bifidobacterium bifidum, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

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268..1020
DNA (753bp) protein (251aa)
Sir2 (Silent information regulator)-like protein n=1 Tax=Bifidobacterium bifidum (strain S17) RepID=E3ERE9_BIFBS
Sir2 (silent information regulator)-like protein
Sir2 (Silent information regulator)-like protein {ECO:0000313|EMBL:ADO53953.1}; TaxID=883062 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium bifidum (strain S17).;"
L3_102_363G1_scaffold_834_2
Bifidobacterium bifidum, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

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comp(1183..2691)
DNA (1509bp) protein (503aa)
Threonine dehydratase n=1 Tax=Bifidobacterium bifidum (strain S17) RepID=E3ERF0_BIFBS
tdcB; threonine dehydratase
Threonine dehydratase {ECO:0000313|EMBL:ADO53954.1}; TaxID=883062 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium bifidum (strain S17).;"
L3_102_363G1_scaffold_834_3
Bifidobacterium bifidum CAG:234, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

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comp(2705..3157)
DNA (453bp) protein (151aa)
cytosine/adenosine deaminase (EC:3.5.4.1)
tRNA-specific adenosine deaminase {ECO:0000256|HAMAP-Rule:MF_00972}; EC=3.5.4.33 {ECO:0000256|HAMAP-Rule:MF_00972};; TaxID=1263058 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium; environmental samples.;" source="Bifidobacterium bifidum CAG:234.;"
Cytosine/adenosine deaminase n=1 Tax=Bifidobacterium bifidum (strain PRL2010) RepID=E4P0H4_BIFBP
L3_102_363G1_scaffold_834_4
Bifidobacterium bifidum, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

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3327..4073
DNA (747bp) protein (249aa)
Phospholipase/carboxylesterase n=5 Tax=Bifidobacterium bifidum RepID=E4VC81_BIFBI
putative phospholipase/carboxylesterase
Putative esterase {ECO:0000313|EMBL:BAQ99005.1}; TaxID=500634 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium bifidum ATCC 29521 = JCM 1255 = DSM 20456.;"
L3_102_363G1_scaffold_834_5
Bifidobacterium bifidum CAG:234, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

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comp(4107..6176)
DNA (2070bp) protein (690aa)
NaH/ antiporter n=1 Tax=Bifidobacterium bifidum CAG:234 RepID=R6GL67_9BIFI
NaH/ antiporter {ECO:0000313|EMBL:CDB22374.1}; TaxID=1263058 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium; environmental samples.;" source="Bifidobacterium bifidum CAG:234.;"
nhaP; Na+/H+ antiporter
L3_102_363G1_scaffold_834_6
Bifidobacterium bifidum, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

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6553..7134
DNA (582bp) protein (194aa)
Deoxycytidine triphosphate deaminase {ECO:0000256|HAMAP-Rule:MF_00146}; Short=dCTP deaminase {ECO:0000256|HAMAP-Rule:MF_00146};; EC=3.5.4.13 {ECO:0000256|HAMAP-Rule:MF_00146};; TaxID=398513 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium bifidum NCIMB 41171.;"
Deoxycytidine triphosphate deaminase n=6 Tax=Bifidobacterium bifidum RepID=E3ERF4_BIFBS
dcd Deoxycytidine triphosphate deaminase
L3_102_363G1_scaffold_834_7
Bifidobacterium bifidum, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

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comp(7226..9505)
DNA (2280bp) protein (760aa)
rafA; alpha-galactosidase (EC:3.2.1.22)
Alpha-galactosidase n=1 Tax=Bifidobacterium bifidum NCIMB 41171 RepID=Q1KTD9_BIFBI
Alpha-galactosidase {ECO:0000313|EMBL:EKE51200.1}; TaxID=1207542 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium bifidum LMG 13195.;"
L3_102_363G1_scaffold_834_8
Bifidobacterium bifidum, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

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comp(9672..12623)
DNA (2952bp) protein (984aa)
ATPase P (EC:3.6.3.8)
Putative calcium-translocating P-type ATPase, PMCA-type n=1 Tax=Bifidobacterium bifidum NCIMB 41171 RepID=E4VC85_BIFBI
Putative calcium-translocating P-type ATPase, PMCA-type {ECO:0000313|EMBL:EFR51200.1}; TaxID=398513 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium bifidum NCIMB 41171.;"
L3_102_363G1_scaffold_834_9
Bifidobacterium bifidum, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

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comp(12834..12950)
DNA (117bp) protein (39aa)
Uncharacterized protein n=1 Tax=Bifidobacterium bifidum ATCC 29521 = JCM 1255 RepID=U2CIE7_BIFBI
Uncharacterized protein {ECO:0000313|EMBL:KFI42100.1}; TaxID=1681 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium bifidum.;"
hypothetical protein
L3_102_363G1_scaffold_834_10
Bifidobacterium bifidum, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

13253..14251
DNA (999bp) protein (333aa)
RNA/rRNA methyltransferase protein (EC:2.1.1.66)
RNA/rRNA methyltransferase protein {ECO:0000313|EMBL:KFI42101.1}; EC=2.1.1.185 {ECO:0000313|EMBL:KFI42101.1};; TaxID=1681 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium bifidum.;"
SpoU rRNA methylase family protein n=7 Tax=Bifidobacterium RepID=E3ERF8_BIFBS
L3_102_363G1_scaffold_834_11
Bifidobacterium bifidum, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(14364..15248)
DNA (885bp) protein (295aa)
Uncharacterized protein n=1 Tax=Bifidobacterium bifidum ATCC 29521 = JCM 1255 RepID=U2CJS3_BIFBI
Lipopolysaccharide kinase (Kdo/WaaP) family protein
Uncharacterized protein {ECO:0000313|EMBL:BAQ99011.1}; TaxID=500634 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium bifidum ATCC 29521 = JCM 1255 = DSM 20456.;"
L3_102_363G1_scaffold_834_12
Bifidobacterium bifidum, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(15208..15588)
DNA (381bp) protein (127aa)
Lipopolysaccharide kinase (Kdo/WaaP) family protein n=4 Tax=Bifidobacterium bifidum RepID=E3ERF9_BIFBS
Lipopolysaccharide kinase (Kdo/WaaP) family protein
Uncharacterized protein {ECO:0000313|EMBL:BAQ99011.1}; TaxID=500634 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium bifidum ATCC 29521 = JCM 1255 = DSM 20456.;"
Displaying 12 items

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