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L3_105_000G1_scaffold_16

Search features with annotation key words

Displaying items 1-30 of 254 in total
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
L3_105_000G1_scaffold_16_1
Streptococcus uberis, Streptococcus, Lactobacillales, Bacilli, Firmicutes, Bacteria

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143..2107
DNA (1965bp) protein (655aa)
Putative type III site-specific deoxyribonuclease n=1 Tax=Streptococcus uberis (strain ATCC BAA-854 / 0140J) RepID=B9DSK4_STRU0
Putative type III site-specific deoxyribonuclease {ECO:0000313|EMBL:CAR42607.1}; TaxID=218495 species="Bacteria; Firmicutes; Bacilli; Lactobacillales; Streptococcaceae; Streptococcus.;" source="Streptococcus uberis (strain ATCC BAA-854 / 0140J).;"
type III site-specific deoxyribonuclease
L3_105_000G1_scaffold_16_2
Clostridium sp. ASF502, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(2664..3029)
DNA (366bp) protein (122aa)
Uncharacterized protein n=1 Tax=Clostridium sp. ASF502 RepID=N1ZWC8_9CLOT
Uncharacterized protein {ECO:0000313|EMBL:EMZ21327.1}; TaxID=97139 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium sp. ASF502.;"
site-specific recombinase, DNA invertase Pin
L3_105_000G1_scaffold_16_3
Fervidobacterium pennivorans, Fervidobacterium, Thermotogales, Thermotogae, Thermotogae, Bacteria

Not on your lists

comp(3072..3587)
DNA (516bp) protein (172aa)
Site-specific recombinase, DNA invertase Pin n=1 Tax=Fervidobacterium pennivorans (strain DSM 9078 / Ven5) RepID=H9UBH6_FERPD
site-specific recombinase, DNA invertase Pin
Site-specific recombinase, DNA invertase Pin {ECO:0000313|EMBL:AFG34869.1}; TaxID=771875 species="Bacteria; Thermotogae; Thermotogales; Fervidobacteriaceae; Fervidobacterium.;" source="Fervidobacterium pennivorans (strain DSM 9078 / Ven5).;"
L3_105_000G1_scaffold_16_4
unknown

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3680..4045
DNA (366bp) protein (122aa)

This feature has no annotations

L3_105_000G1_scaffold_16_5
Phascolarctobacterium sp. CAG:207, Phascolarctobacterium, Selenomonadales, Negativicutes, Firmicutes, Bacteria

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comp(4279..5655)
DNA (1377bp) protein (459aa)
23S rRNA (Uracil-5-)-methyltransferase RumA n=1 Tax=Phascolarctobacterium sp. CAG:207 RepID=R6I8I5_9FIRM
23S rRNA (Uracil-5-)-methyltransferase RumA {ECO:0000313|EMBL:CDB45620.1}; TaxID=1262914 species="Bacteria; Firmicutes; Negativicutes; Selenomonadales; Acidaminococcaceae; Phascolarctobacterium.;" source="Phascolarctobacterium sp. CAG:207.;"
23S rRNA (uracil-5-)-methyltransferase RumA
L3_105_000G1_scaffold_16_6
Phascolarctobacterium sp. CAG:207, Phascolarctobacterium, Selenomonadales, Negativicutes, Firmicutes, Bacteria

Not on your lists

comp(5784..6275)
DNA (492bp) protein (164aa)
YbaK/prolyl-tRNA synthetase associated region n=1 Tax=Phascolarctobacterium sp. CAG:207 RepID=R6IGE4_9FIRM
YbaK/prolyl-tRNA synthetase associated region {ECO:0000313|EMBL:CDB45619.1}; TaxID=1262914 species="Bacteria; Firmicutes; Negativicutes; Selenomonadales; Acidaminococcaceae; Phascolarctobacterium.;" source="Phascolarctobacterium sp. CAG:207.;"
YbaK/prolyl-tRNA synthetase associated region
L3_105_000G1_scaffold_16_7
Phascolarctobacterium sp. CAG:207, Phascolarctobacterium, Selenomonadales, Negativicutes, Firmicutes, Bacteria

Not on your lists

6445..6651
DNA (207bp) protein (69aa)
Hydrid cluster protein-associated redox disulfide domain protein n=1 Tax=Phascolarctobacterium sp. CAG:207 RepID=R6I620_9FIRM
Hydrid cluster protein-associated redox disulfide domain protein {ECO:0000313|EMBL:CDB45618.1}; TaxID=1262914 species="Bacteria; Firmicutes; Negativicutes; Selenomonadales; Acidaminococcaceae; Phascolarctobacterium.;" source="Phascolarctobacterium sp. CAG:207.;"
hypothetical protein
L3_105_000G1_scaffold_16_8
Phascolarctobacterium sp. CAG:207, Phascolarctobacterium, Selenomonadales, Negativicutes, Firmicutes, Bacteria

Not on your lists

comp(6701..7534)
DNA (834bp) protein (278aa)
Probable endonuclease 4 {ECO:0000256|HAMAP-Rule:MF_00152}; EC=3.1.21.2 {ECO:0000256|HAMAP-Rule:MF_00152};; Endodeoxyribonuclease IV {ECO:0000256|HAMAP-Rule:MF_00152}; Endonuclease IV {ECO:0000256|HAMAP-Rule:MF_00152}; TaxID=1262914 species="Bacteria; Firmicutes; Negativicutes; Selenomonadales; Acidaminococcaceae; Phascolarctobacterium.;" source="Phascolarctobacterium sp. CAG:207.;"
endonuclease 4 (EC:3.1.21.2)
Probable endonuclease 4 n=1 Tax=Phascolarctobacterium sp. CAG:207 RepID=R6J5L2_9FIRM
L3_105_000G1_scaffold_16_9
Phascolarctobacterium sp. CAG:207, Phascolarctobacterium, Selenomonadales, Negativicutes, Firmicutes, Bacteria

Not on your lists

7616..8308
DNA (693bp) protein (231aa)
Uncharacterized protein n=1 Tax=Phascolarctobacterium sp. CAG:207 RepID=R6IJT3_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:CDB45616.1}; TaxID=1262914 species="Bacteria; Firmicutes; Negativicutes; Selenomonadales; Acidaminococcaceae; Phascolarctobacterium.;" source="Phascolarctobacterium sp. CAG:207.;"
putative DNA alkylation repair enzyme
L3_105_000G1_scaffold_16_10
Phascolarctobacterium sp. CAG:207, Phascolarctobacterium, Selenomonadales, Negativicutes, Firmicutes, Bacteria

Not on your lists

comp(8654..9877)
DNA (1224bp) protein (408aa)
Peptidase T {ECO:0000256|SAAS:SAAS00064331}; EC=3.-.-.- {ECO:0000256|SAAS:SAAS00279025};; EC=3.4.11.- {ECO:0000256|SAAS:SAAS00275860};; EC=3.4.11.4 {ECO:0000256|SAAS:SAAS00064282};; TaxID=1262914 species="Bacteria; Firmicutes; Negativicutes; Selenomonadales; Acidaminococcaceae; Phascolarctobacterium.;" source="Phascolarctobacterium sp. CAG:207.;"
Peptidase T (EC:3.4.11.4)
Peptidase T n=1 Tax=Phascolarctobacterium sp. CAG:207 RepID=R6I8I2_9FIRM
L3_105_000G1_scaffold_16_11
Phascolarctobacterium sp. CAG:207, Phascolarctobacterium, Selenomonadales, Negativicutes, Firmicutes, Bacteria

Not on your lists

comp(9890..11113)
DNA (1224bp) protein (408aa)
Uncharacterized protein n=1 Tax=Phascolarctobacterium sp. CAG:207 RepID=R6IGE0_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:CDB45614.1}; TaxID=1262914 species="Bacteria; Firmicutes; Negativicutes; Selenomonadales; Acidaminococcaceae; Phascolarctobacterium.;" source="Phascolarctobacterium sp. CAG:207.;"
protein of unknown function DUF815
L3_105_000G1_scaffold_16_12
Phascolarctobacterium sp. CAG:207, Phascolarctobacterium, Selenomonadales, Negativicutes, Firmicutes, Bacteria

Not on your lists

comp(11115..11582)
DNA (468bp) protein (156aa)
2-amino-4-hydroxy-6-hydroxymethyldihydropteridine diphosphokinase n=1 Tax=Phascolarctobacterium sp. CAG:207 RepID=R6I616_9FIRM
2-amino-4-hydroxy-6-hydroxymethyldihydropteridine diphosphokinase {ECO:0000313|EMBL:CDB45613.1}; TaxID=1262914 species="Bacteria; Firmicutes; Negativicutes; Selenomonadales; Acidaminococcaceae; Phascolarctobacterium.;" source="Phascolarctobacterium sp. CAG:207.;"
2-amino-4-hydroxy-6-hydroxymethyldihydropteridine pyrophosphokinase
L3_105_000G1_scaffold_16_13
Phascolarctobacterium sp. CAG:207, Phascolarctobacterium, Selenomonadales, Negativicutes, Firmicutes, Bacteria

Not on your lists

comp(11564..12757)
DNA (1194bp) protein (398aa)
dihydropteroate synthase (EC:2.5.1.15)
Dihydropteroate synthase n=1 Tax=Phascolarctobacterium sp. CAG:207 RepID=R6J5K8_9FIRM
Dihydropteroate synthase {ECO:0000313|EMBL:CDB45612.1}; TaxID=1262914 species="Bacteria; Firmicutes; Negativicutes; Selenomonadales; Acidaminococcaceae; Phascolarctobacterium.;" source="Phascolarctobacterium sp. CAG:207.;"
L3_105_000G1_scaffold_16_14
Phascolarctobacterium sp. CAG:207, Phascolarctobacterium, Selenomonadales, Negativicutes, Firmicutes, Bacteria

Not on your lists

comp(12754..13533)
DNA (780bp) protein (260aa)
GTP cyclohydrolase FolE2 {ECO:0000256|HAMAP-Rule:MF_01527}; EC=3.5.4.16 {ECO:0000256|HAMAP-Rule:MF_01527};; TaxID=1262914 species="Bacteria; Firmicutes; Negativicutes; Selenomonadales; Acidaminococcaceae; Phascolarctobacterium.;" source="Phascolarctobacterium sp. CAG:207.;"
GTP cyclohydrolase FolE2 n=1 Tax=Phascolarctobacterium sp. CAG:207 RepID=R6IJS9_9FIRM
hypothetical protein
L3_105_000G1_scaffold_16_15
Phascolarctobacterium sp. CAG:207, Phascolarctobacterium, Selenomonadales, Negativicutes, Firmicutes, Bacteria

Not on your lists

comp(13533..13892)
DNA (360bp) protein (120aa)
6-carboxy-5,6,7,8-tetrahydropterin synthase {ECO:0000256|PIRNR:PIRNR006113}; EC=4.-.-.- {ECO:0000256|PIRNR:PIRNR006113};; TaxID=1262914 species="Bacteria; Firmicutes; Negativicutes; Selenomonadales; Acidaminococcaceae; Phascolarctobacterium.;" source="Phascolarctobacterium sp. CAG:207.;"
ptpS; queuosine biosynthesis protein queD (EC:4.2.3.12)
6-carboxy-5,6,7,8-tetrahydropterin synthase n=1 Tax=Phascolarctobacterium sp. CAG:207 RepID=R6I8H8_9FIRM
L3_105_000G1_scaffold_16_16
Phascolarctobacterium sp. CAG:207, Phascolarctobacterium, Selenomonadales, Negativicutes, Firmicutes, Bacteria

Not on your lists

comp(13911..14375)
DNA (465bp) protein (155aa)
Putative tRNA (cytidine(34)-2'-O)-methyltransferase {ECO:0000256|HAMAP-Rule:MF_01885}; EC=2.1.1.207 {ECO:0000256|HAMAP-Rule:MF_01885};; tRNA (cytidine/uridine-2'-O-)-methyltransferase {ECO:0000256|HAMAP-Rule:MF_01885}; TaxID=1262914 species="Bacteria; Firmicutes; Negativicutes; Selenomonadales; Acidaminococcaceae; Phascolarctobacterium.;" source="Phascolarctobacterium sp. CAG:207.;"
Putative tRNA (cytidine(34)-2'-O)-methyltransferase n=1 Tax=Phascolarctobacterium sp. CAG:207 RepID=R6IGD4_9FIRM
RNA methyltransferase
L3_105_000G1_scaffold_16_17
Phascolarctobacterium sp. CAG:207, Phascolarctobacterium, Selenomonadales, Negativicutes, Firmicutes, Bacteria

Not on your lists

comp(14440..15534)
DNA (1095bp) protein (365aa)
Tapetum specific protein TAP35/TAP44 n=1 Tax=Phascolarctobacterium sp. CAG:207 RepID=R6I614_9FIRM
Tapetum specific protein TAP35/TAP44 {ECO:0000313|EMBL:CDB45608.1}; TaxID=1262914 species="Bacteria; Firmicutes; Negativicutes; Selenomonadales; Acidaminococcaceae; Phascolarctobacterium.;" source="Phascolarctobacterium sp. CAG:207.;"
hypothetical protein
L3_105_000G1_scaffold_16_18
Phascolarctobacterium sp. CAG:207, Phascolarctobacterium, Selenomonadales, Negativicutes, Firmicutes, Bacteria

Not on your lists

15682..16347
DNA (666bp) protein (222aa)
UPF0173 metal-dependent hydrolase BN533_00733 n=1 Tax=Phascolarctobacterium sp. CAG:207 RepID=R6J5K5_9FIRM
UPF0173 metal-dependent hydrolase BN533_00733 {ECO:0000256|HAMAP-Rule:MF_00457}; TaxID=1262914 species="Bacteria; Firmicutes; Negativicutes; Selenomonadales; Acidaminococcaceae; Phascolarctobacterium.;" source="Phascolarctobacterium sp. CAG:207.;"
beta-lactamase
L3_105_000G1_scaffold_16_19
Phascolarctobacterium sp. CAG:207, Phascolarctobacterium, Selenomonadales, Negativicutes, Firmicutes, Bacteria

Not on your lists

comp(16404..17324)
DNA (921bp) protein (307aa)
Uncharacterized protein n=1 Tax=Phascolarctobacterium sp. CAG:207 RepID=R6IJS5_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:CDB45606.1}; TaxID=1262914 species="Bacteria; Firmicutes; Negativicutes; Selenomonadales; Acidaminococcaceae; Phascolarctobacterium.;" source="Phascolarctobacterium sp. CAG:207.;"
L3_105_000G1_scaffold_16_20
Phascolarctobacterium sp. CAG:207, Phascolarctobacterium, Selenomonadales, Negativicutes, Firmicutes, Bacteria

Not on your lists

comp(17321..17824)
DNA (504bp) protein (168aa)
Uncharacterized protein n=1 Tax=Phascolarctobacterium sp. CAG:207 RepID=R6I8H4_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:CDB45605.1}; TaxID=1262914 species="Bacteria; Firmicutes; Negativicutes; Selenomonadales; Acidaminococcaceae; Phascolarctobacterium.;" source="Phascolarctobacterium sp. CAG:207.;"
L3_105_000G1_scaffold_16_21
Phascolarctobacterium sp. CAG:207, Phascolarctobacterium, Selenomonadales, Negativicutes, Firmicutes, Bacteria

Not on your lists

comp(17808..18107)
DNA (300bp) protein (100aa)
Uncharacterized protein n=1 Tax=Phascolarctobacterium sp. CAG:207 RepID=R6IGD0_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:CDB45604.1}; TaxID=1262914 species="Bacteria; Firmicutes; Negativicutes; Selenomonadales; Acidaminococcaceae; Phascolarctobacterium.;" source="Phascolarctobacterium sp. CAG:207.;"
L3_105_000G1_scaffold_16_22
Phascolarctobacterium sp. CAG:207, Phascolarctobacterium, Selenomonadales, Negativicutes, Firmicutes, Bacteria

Not on your lists

comp(18118..18621)
DNA (504bp) protein (168aa)
Uncharacterized protein n=1 Tax=Phascolarctobacterium sp. CAG:207 RepID=R6I609_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:CDB45603.1}; TaxID=1262914 species="Bacteria; Firmicutes; Negativicutes; Selenomonadales; Acidaminococcaceae; Phascolarctobacterium.;" source="Phascolarctobacterium sp. CAG:207.;"
L3_105_000G1_scaffold_16_23
Phascolarctobacterium sp. CAG:207, Phascolarctobacterium, Selenomonadales, Negativicutes, Firmicutes, Bacteria

Not on your lists

comp(18575..18958)
DNA (384bp) protein (128aa)
Prepilin-type cleavage/methylation protein n=1 Tax=Phascolarctobacterium sp. CAG:207 RepID=R6J5K1_9FIRM
Prepilin-type cleavage/methylation protein {ECO:0000313|EMBL:CDB45602.1}; TaxID=1262914 species="Bacteria; Firmicutes; Negativicutes; Selenomonadales; Acidaminococcaceae; Phascolarctobacterium.;" source="Phascolarctobacterium sp. CAG:207.;"
hypothetical protein
L3_105_000G1_scaffold_16_24
Phascolarctobacterium sp. CAG:207, Phascolarctobacterium, Selenomonadales, Negativicutes, Firmicutes, Bacteria

Not on your lists

comp(18969..20171)
DNA (1203bp) protein (401aa)
Type II secretion system F domain protein n=1 Tax=Phascolarctobacterium sp. CAG:207 RepID=R6IJS2_9FIRM
Type II secretion system F domain protein {ECO:0000313|EMBL:CDB45601.1}; TaxID=1262914 species="Bacteria; Firmicutes; Negativicutes; Selenomonadales; Acidaminococcaceae; Phascolarctobacterium.;" source="Phascolarctobacterium sp. CAG:207.;"
type II secretion system F domain-containing protein
L3_105_000G1_scaffold_16_25
Phascolarctobacterium sp. CAG:207, Phascolarctobacterium, Selenomonadales, Negativicutes, Firmicutes, Bacteria

Not on your lists

comp(20338..21702)
DNA (1365bp) protein (455aa)
Uncharacterized protein n=1 Tax=Phascolarctobacterium sp. CAG:207 RepID=R6I8G9_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:CDB45600.1}; TaxID=1262914 species="Bacteria; Firmicutes; Negativicutes; Selenomonadales; Acidaminococcaceae; Phascolarctobacterium.;" source="Phascolarctobacterium sp. CAG:207.;"
L3_105_000G1_scaffold_16_26
Phascolarctobacterium succinatutens, Phascolarctobacterium, Selenomonadales, Negativicutes, Firmicutes, Bacteria

Not on your lists

comp(21721..23469)
DNA (1749bp) protein (583aa)
Pyruvate kinase {ECO:0000256|RuleBase:RU000504}; EC=2.7.1.40 {ECO:0000256|RuleBase:RU000504};; TaxID=1263101 species="Bacteria; Firmicutes; Negativicutes; Selenomonadales; Acidaminococcaceae; Phascolarctobacterium.;" source="Phascolarctobacterium succinatutens CAG:287.;"
Pyruvate kinase n=1 Tax=Phascolarctobacterium succinatutens CAG:287 RepID=R6WLM4_9FIRM
pyruvate kinase
L3_105_000G1_scaffold_16_27
Phascolarctobacterium sp. CAG:207, Phascolarctobacterium, Selenomonadales, Negativicutes, Firmicutes, Bacteria

Not on your lists

comp(23488..23682)
DNA (195bp) protein (65aa)
Uncharacterized protein n=1 Tax=Phascolarctobacterium sp. CAG:207 RepID=R6I605_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:CDB45598.1}; TaxID=1262914 species="Bacteria; Firmicutes; Negativicutes; Selenomonadales; Acidaminococcaceae; Phascolarctobacterium.;" source="Phascolarctobacterium sp. CAG:207.;"
L3_105_000G1_scaffold_16_28
Phascolarctobacterium sp. CAG:207, Phascolarctobacterium, Selenomonadales, Negativicutes, Firmicutes, Bacteria

Not on your lists

comp(23707..24897)
DNA (1191bp) protein (397aa)
Electron transfer flavoprotein subunit alpha n=1 Tax=Phascolarctobacterium sp. CAG:207 RepID=R6J5J7_9FIRM
Electron transfer flavoprotein subunit alpha {ECO:0000313|EMBL:CDB45597.1}; TaxID=1262914 species="Bacteria; Firmicutes; Negativicutes; Selenomonadales; Acidaminococcaceae; Phascolarctobacterium.;" source="Phascolarctobacterium sp. CAG:207.;"
Electron transfer flavoprotein alpha/beta-subunit
L3_105_000G1_scaffold_16_29
Phascolarctobacterium sp. CAG:207, Phascolarctobacterium, Selenomonadales, Negativicutes, Firmicutes, Bacteria

Not on your lists

comp(24909..25706)
DNA (798bp) protein (266aa)
Electron transfer flavoprotein subunit beta n=1 Tax=Phascolarctobacterium sp. CAG:207 RepID=R6IJR9_9FIRM
Electron transfer flavoprotein subunit beta {ECO:0000313|EMBL:CDB45596.1}; TaxID=1262914 species="Bacteria; Firmicutes; Negativicutes; Selenomonadales; Acidaminococcaceae; Phascolarctobacterium.;" source="Phascolarctobacterium sp. CAG:207.;"
Electron transfer flavoprotein alpha/beta-subunit
L3_105_000G1_scaffold_16_30
Phascolarctobacterium sp. CAG:207, Phascolarctobacterium, Selenomonadales, Negativicutes, Firmicutes, Bacteria

Not on your lists

comp(25812..29216)
DNA (3405bp) protein (1135aa)
DNA-directed DNA polymerase {ECO:0000256|SAAS:SAAS00057170}; EC=2.7.7.7 {ECO:0000256|SAAS:SAAS00057170};; TaxID=1262914 species="Bacteria; Firmicutes; Negativicutes; Selenomonadales; Acidaminococcaceae; Phascolarctobacterium.;" source="Phascolarctobacterium sp. CAG:207.;"
DNA polymerase III alpha subunit n=1 Tax=Phascolarctobacterium sp. CAG:207 RepID=R6I8G6_9FIRM
DNA polymerase III subunit alpha
Displaying items 1-30 of 254 in total

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