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L3_105_000G1_scaffold_17

Search features with annotation key words

Displaying items 1-30 of 231 in total
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
L3_105_000G1_scaffold_17_1
unknown

Not on your lists

3..107
DNA (105bp) protein (35aa)

This feature has no annotations

L3_105_000G1_scaffold_17_2
Peptoclostridium difficile, Peptoclostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

94..660
DNA (567bp) protein (189aa)
Uncharacterized protein n=48 Tax=Clostridium difficile RepID=T2VFS2_CLODI
conserved hypothetical protein
Uncharacterised protein {ECO:0000313|EMBL:CKG97110.1}; Uncharacterized protein {ECO:0000313|EMBL:CEJ97781.1}; TaxID=1496 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Peptostreptococcaceae; Peptoclostridium.;" source="Peptoclostridium difficile (Clostridium difficile).;"
L3_105_000G1_scaffold_17_3
Peptoclostridium difficile, Peptoclostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(753..1244)
DNA (492bp) protein (164aa)
Acetyltransferase family protein n=183 Tax=Clostridium difficile RepID=T3HVC8_CLODC
Acetyltransferase family protein {ECO:0000313|EMBL:EQI87107.1}; TaxID=1151391 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Peptostreptococcaceae; Peptoclostridium.;" source="Peptoclostridium difficile Y384.;"
putative N-acetyltransferase
L3_105_000G1_scaffold_17_4
Peptoclostridium difficile, Peptoclostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(1305..1763)
DNA (459bp) protein (153aa)
Spermine/spermidine acetyltransferase n=5 Tax=Clostridium difficile RepID=T2YFL8_CLODI
Putative diamine N-acetyltransferase {ECO:0000313|EMBL:EHJ26122.1}; TaxID=997828 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Peptostreptococcaceae; Peptoclostridium.;" source="Peptoclostridium difficile 050-P50-2011.;"
bltD; spermine/spermidine acetyltransferase
L3_105_000G1_scaffold_17_5
Peptoclostridium difficile, Peptoclostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

1906..2964
DNA (1059bp) protein (353aa)
spoIVB; Stage IV sporulation protein B, peptidase S55family (EC:3.4.21.116)
Stage IV sporulation protein B {ECO:0000313|EMBL:CKG97194.1}; EC=3.4.21.116 {ECO:0000313|EMBL:CKG97194.1};; Stage IV sporulation protein B, peptidase S55 family {ECO:0000313|EMBL:CDT47668.1}; EC=3.4.21.116 {ECO:0000313|EMBL:CDT47668.1};; Stage IV sporulation protein B, peptidase S55family {ECO:0000313|EMBL:CEJ97784.1}; EC=3.4.21.116 {ECO:0000313|EMBL:CEJ97784.1};; TaxID=1496 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Peptostreptococcaceae; Peptoclostridium.;" source="Peptoclostridium difficile (Clostridium difficile).;"
PDZ domain protein n=124 Tax=Clostridium difficile RepID=T3HSC5_CLODC
L3_105_000G1_scaffold_17_6
Peptoclostridium difficile, Peptoclostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

3106..3930
DNA (825bp) protein (275aa)
Stage 0 sporulation protein A n=122 Tax=Clostridium difficile RepID=C9XNU1_CLODC
spo0A; stage 0 sporulation protein A
Stage 0 sporulation protein A homolog {ECO:0000256|PIRNR:PIRNR002937}; TaxID=525258 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Peptostreptococcaceae; Peptoclostridium.;" source="Peptoclostridium difficile NAP07.;"
L3_105_000G1_scaffold_17_7
Peptoclostridium difficile, Peptoclostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

4343..5464
DNA (1122bp) protein (374aa)
Thiamin pyrophosphokinase, catalytic domain protein n=212 Tax=Clostridium difficile RepID=T2TM71_CLODI
pyrophosphokinase
Thiamin pyrophosphokinase, catalytic domain protein {ECO:0000313|EMBL:EQI87111.1}; TaxID=1151391 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Peptostreptococcaceae; Peptoclostridium.;" source="Peptoclostridium difficile Y384.;"
L3_105_000G1_scaffold_17_8
Peptoclostridium difficile, Peptoclostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

5482..6357
DNA (876bp) protein (292aa)
Uncharacterized protein n=8 Tax=Clostridium difficile RepID=G6BW43_CLODI
Uncharacterized protein {ECO:0000313|EMBL:CCL21324.1}; TaxID=1215067 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Peptostreptococcaceae; Peptoclostridium.;" source="Peptoclostridium difficile T15.;"
conserved hypothetical protein
L3_105_000G1_scaffold_17_9
Peptoclostridium difficile, Peptoclostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

6381..7073
DNA (693bp) protein (231aa)
Glycosyl transferase 2 family protein n=187 Tax=Clostridium difficile RepID=C9XNU4_CLODC
glycosyltransferase
Glycosyl transferase 2 family protein {ECO:0000313|EMBL:EQE67522.1}; TaxID=1151268 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Peptostreptococcaceae; Peptoclostridium.;" source="Peptoclostridium difficile CD45.;"
L3_105_000G1_scaffold_17_10
Peptoclostridium difficile, Peptoclostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

7081..7905
DNA (825bp) protein (275aa)
Glycosyl transferase 4 family protein n=172 Tax=Clostridium difficile RepID=C9XNU5_CLODC
glycosyltransferase
Glycosyl transferase 4 family protein {ECO:0000313|EMBL:EQE67514.1}; TaxID=1151268 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Peptostreptococcaceae; Peptoclostridium.;" source="Peptoclostridium difficile CD45.;"
L3_105_000G1_scaffold_17_11
Peptoclostridium difficile, Peptoclostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

7910..8977
DNA (1068bp) protein (356aa)
Uncharacterized protein n=82 Tax=Clostridium difficile RepID=G6BW46_CLODI
Uncharacterized protein {ECO:0000313|EMBL:EQG77970.1}; TaxID=1151334 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Peptostreptococcaceae; Peptoclostridium.;" source="Peptoclostridium difficile DA00165.;"
hypothetical protein
L3_105_000G1_scaffold_17_12
Peptoclostridium difficile, Peptoclostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

8979..9515
DNA (537bp) protein (179aa)
ADP-ribose pyrophosphatase n=211 Tax=Clostridium difficile RepID=C9XNU7_CLODC
ADP-ribose pyrophosphatase
Hydrolase, NUDIX family {ECO:0000313|EMBL:EHJ30568.1}; TaxID=997827 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Peptostreptococcaceae; Peptoclostridium.;" source="Peptoclostridium difficile 002-P50-2011.;"
L3_105_000G1_scaffold_17_13
Peptoclostridium difficile, Peptoclostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

9655..10188
DNA (534bp) protein (178aa)
Uncharacterized protein n=126 Tax=Clostridium difficile RepID=T2U2N5_CLODI
putative membrane protein
Putative membrane protein {ECO:0000313|EMBL:CCL21329.1}; TaxID=1215067 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Peptostreptococcaceae; Peptoclostridium.;" source="Peptoclostridium difficile T15.;"
L3_105_000G1_scaffold_17_14
Peptoclostridium difficile, Peptoclostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

10200..11114
DNA (915bp) protein (305aa)
Phage integrase family protein n=151 Tax=Clostridium difficile RepID=C9XNU9_CLODC
tyrosine recombinase
Phage integrase family protein {ECO:0000313|EMBL:EQG77545.1}; TaxID=1151334 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Peptostreptococcaceae; Peptoclostridium.;" source="Peptoclostridium difficile DA00165.;"
L3_105_000G1_scaffold_17_15
Peptoclostridium difficile, Peptoclostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

11156..12328
DNA (1173bp) protein (391aa)
Phosphopentomutase {ECO:0000256|HAMAP-Rule:MF_00740, ECO:0000256|SAAS:SAAS00010015}; EC=5.4.2.7 {ECO:0000256|HAMAP-Rule:MF_00740, ECO:0000256|SAAS:SAAS00009998};; Phosphodeoxyribomutase {ECO:0000256|HAMAP-Rule:MF_00740}; TaxID=1151268 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Peptostreptococcaceae; Peptoclostridium.;" source="Peptoclostridium difficile CD45.;"
Phosphopentomutase n=108 Tax=Clostridium difficile RepID=C9XNV0_CLODC
deoB; phosphopentomutase
L3_105_000G1_scaffold_17_16
Peptoclostridium difficile, Peptoclostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

12375..13187
DNA (813bp) protein (271aa)
Purine nucleoside phosphorylase {ECO:0000256|PIRNR:PIRNR000477, ECO:0000313|EMBL:CBE03327.1}; EC=2.4.2.1 {ECO:0000256|PIRNR:PIRNR000477};; Inosine-guanosine phosphorylase {ECO:0000256|PIRNR:PIRNR000477}; TaxID=645463 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Peptostreptococcaceae; Peptoclostridium.;" source="Peptoclostridium difficile (strain R20291) (Clostridium difficile).;"
Purine nucleoside phosphorylase n=49 Tax=Clostridium difficile RepID=G6BW51_CLODI
deoD; purine nucleoside phosphorylase
L3_105_000G1_scaffold_17_17
Peptoclostridium difficile, Peptoclostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

13391..14716
DNA (1326bp) protein (442aa)
pdp; Pyrimidine-nucleoside phosphorylase (EC:2.4.2.2)
Pyrimidine-nucleoside phosphorylase {ECO:0000313|EMBL:EQG77439.1}; EC=2.4.2.2 {ECO:0000313|EMBL:EQG77439.1};; TaxID=1151334 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Peptostreptococcaceae; Peptoclostridium.;" source="Peptoclostridium difficile DA00165.;"
Pyrimidine-nucleoside phosphorylase n=168 Tax=Clostridium difficile RepID=Q18B84_CLOD6
L3_105_000G1_scaffold_17_18
Peptoclostridium difficile, Peptoclostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

14929..16008
DNA (1080bp) protein (360aa)
YceG family protein n=141 Tax=Clostridium difficile RepID=G6BW53_CLODI
exported aminodeoxychorismate lyase
Putative aminodeoxychorismate lyase {ECO:0000313|EMBL:CAJ68080.1}; TaxID=272563 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Peptostreptococcaceae; Peptoclostridium.;" source="Peptoclostridium difficile (strain 630) (Clostridium difficile).;"
L3_105_000G1_scaffold_17_19
Peptoclostridium difficile, Peptoclostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

16180..16854
DNA (675bp) protein (225aa)
putative O-methyltransferase (EC:2.1.1.-)
Mycolic acid cyclopropane synthetase family protein n=177 Tax=Clostridium difficile RepID=T3HWG2_CLODC
Mycolic acid cyclopropane synthetase family protein {ECO:0000313|EMBL:EQG77646.1}; TaxID=1151334 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Peptostreptococcaceae; Peptoclostridium.;" source="Peptoclostridium difficile DA00165.;"
L3_105_000G1_scaffold_17_20
Peptoclostridium difficile, Peptoclostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

16841..18088
DNA (1248bp) protein (416aa)
Peptidase U32 family protein n=172 Tax=Clostridium difficile RepID=T3HXD8_CLODC
putative peptidase, U32 family
Peptidase U32 family protein {ECO:0000313|EMBL:EQI86918.1}; TaxID=1151391 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Peptostreptococcaceae; Peptoclostridium.;" source="Peptoclostridium difficile Y384.;"
L3_105_000G1_scaffold_17_21
Peptoclostridium difficile, Peptoclostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

18160..19824
DNA (1665bp) protein (555aa)
Putative peptidoglycan glycosyltransferase {ECO:0000313|EMBL:CAJ68083.1}; EC=2.4.1.129 {ECO:0000313|EMBL:CAJ68083.1};; TaxID=272563 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Peptostreptococcaceae; Peptoclostridium.;" source="Peptoclostridium difficile (strain 630) (Clostridium difficile).;"
peptidoglycan glycosyltransferase (EC:2.4.1.129)
Penicillin binding transpeptidase domain protein n=101 Tax=Clostridium difficile RepID=C9XNV6_CLODC
L3_105_000G1_scaffold_17_22
Peptoclostridium difficile, Peptoclostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(19921..20205)
DNA (285bp) protein (95aa)
RNA polymerase sigma factor n=141 Tax=Clostridium difficile RepID=T3HSU8_CLODC
FliA/WhiG family RNA polymerase sigma 28 subunit
RNA polymerase sigma factor {ECO:0000256|RuleBase:RU000715}; TaxID=525259 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Peptostreptococcaceae; Peptoclostridium.;" source="Peptoclostridium difficile NAP08.;"
L3_105_000G1_scaffold_17_23
Peptoclostridium difficile, Peptoclostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(20228..21745)
DNA (1518bp) protein (506aa)
Resolvase protein n=46 Tax=Clostridium difficile RepID=G6BW58_CLODI
Resolvase, N terminal domain protein {ECO:0000313|EMBL:EQE67486.1}; TaxID=1151268 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Peptostreptococcaceae; Peptoclostridium.;" source="Peptoclostridium difficile CD45.;"
putative site-specific recombinase
L3_105_000G1_scaffold_17_24
Peptoclostridium difficile, Peptoclostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(21870..22691)
DNA (822bp) protein (274aa)
Tetratricopeptide repeat protein n=19 Tax=Clostridium difficile RepID=G6BW59_CLODI
lipoprotein
Lipoprotein {ECO:0000313|EMBL:CKG97840.1}; Putative lipoprotein {ECO:0000313|EMBL:CEJ97803.1}; TaxID=1496 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Peptostreptococcaceae; Peptoclostridium.;" source="Peptoclostridium difficile (Clostridium difficile).;"
L3_105_000G1_scaffold_17_25
Peptoclostridium difficile, Peptoclostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

22882..24309
DNA (1428bp) protein (476aa)
Peptidase propeptide and YPEB domain protein n=9 Tax=Clostridium difficile RepID=T2WUK8_CLODI
Peptidase propeptide and YPEB domain protein {ECO:0000313|EMBL:EQE67540.1}; TaxID=1151268 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Peptostreptococcaceae; Peptoclostridium.;" source="Peptoclostridium difficile CD45.;"
cwp26; putative cell surface protein cwp26
L3_105_000G1_scaffold_17_26
Peptoclostridium difficile, Peptoclostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(25910..26134)
DNA (225bp) protein (75aa)
DNA-binding helix-turn-helix protein n=42 Tax=Clostridium difficile RepID=G6BW61_CLODI
Toxin-antitoxin system, antitoxin component, Xre domain protein {ECO:0000313|EMBL:EHJ26100.1}; TaxID=997828 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Peptostreptococcaceae; Peptoclostridium.;" source="Peptoclostridium difficile 050-P50-2011.;"
5; helix-turn-helix family protein
L3_105_000G1_scaffold_17_27
Peptoclostridium difficile, Peptoclostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

26845..27000
DNA (156bp) protein (52aa)
Uncharacterized protein n=52 Tax=Clostridium difficile RepID=T3HUA4_CLODC
putative phage regulator
Phage anti-repressor {ECO:0000313|EMBL:CKG97890.1}; Putative phage regulator {ECO:0000313|EMBL:CEJ97807.1}; TaxID=1496 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Peptostreptococcaceae; Peptoclostridium.;" source="Peptoclostridium difficile (Clostridium difficile).;"
L3_105_000G1_scaffold_17_28
Peptoclostridium difficile, Peptoclostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

27246..27497
DNA (252bp) protein (84aa)
Uncharacterized protein n=124 Tax=Clostridium difficile RepID=C9XNW2_CLODC
hypothetical protein
Putative phage protein {ECO:0000313|EMBL:CCK93387.1}; TaxID=1215060 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Peptostreptococcaceae; Peptoclostridium.;" source="Peptoclostridium difficile T20.;"
L3_105_000G1_scaffold_17_29
Peptoclostridium difficile, Peptoclostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

27817..27930
DNA (114bp) protein (38aa)
Uncharacterized protein n=31 Tax=Clostridium difficile RepID=G6BW64_CLODI
putative phage protein
Putative phage protein {ECO:0000313|EMBL:CDS86451.1}; Uncharacterised protein {ECO:0000313|EMBL:CKG97928.1}; TaxID=1496 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Peptostreptococcaceae; Peptoclostridium.;" source="Peptoclostridium difficile (Clostridium difficile).;"
L3_105_000G1_scaffold_17_30
Peptoclostridium difficile, Peptoclostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

28138..28347
DNA (210bp) protein (70aa)
Uncharacterized protein n=14 Tax=Clostridium difficile RepID=G6BW65_CLODI
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:EHJ26096.1}; TaxID=997828 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Peptostreptococcaceae; Peptoclostridium.;" source="Peptoclostridium difficile 050-P50-2011.;"
Displaying items 1-30 of 231 in total

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