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L3_105_000G1_scaffold_20

Search features with annotation key words

Displaying items 1-30 of 203 in total
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
L3_105_000G1_scaffold_20_1
Clostridium butyricum, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(536..1921)
DNA (1386bp) protein (462aa)
UPI0003D672A0 related cluster n=1 Tax=unknown RepID=UPI0003D672A0
ErfK/YbiS/YcfS/YnhG family {ECO:0000313|EMBL:ETI89021.1}; TaxID=1403941 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium butyricum DORA_1.;"
ErfK family protein
L3_105_000G1_scaffold_20_2
Clostridium butyricum, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(2230..2949)
DNA (720bp) protein (240aa)
UPI0003D67FDF related cluster n=1 Tax=unknown RepID=UPI0003D67FDF
Phosphohistidinol phosphatase {ECO:0000313|EMBL:ETI89022.1}; TaxID=1403941 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium butyricum DORA_1.;"
hydrolase
L3_105_000G1_scaffold_20_3
Clostridium butyricum, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(2988..3944)
DNA (957bp) protein (319aa)
hprA; glycerate dehydrogenase HprA (EC:1.1.1.29)
UPI0003D64B69 related cluster n=1 Tax=unknown RepID=UPI0003D64B69
Glycerate dehydrogenase {ECO:0000313|EMBL:ETI89023.1}; TaxID=1403941 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium butyricum DORA_1.;"
L3_105_000G1_scaffold_20_4
Clostridium butyricum, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(4226..6589)
DNA (2364bp) protein (788aa)
Alpha-1,4 glucan phosphorylase {ECO:0000256|RuleBase:RU000587}; EC=2.4.1.1 {ECO:0000256|RuleBase:RU000587};; TaxID=1492 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium butyricum.;"
glgP1; glycogen phosphorylase GlgP (EC:2.4.1.1)
UPI0003D5EF19 related cluster n=1 Tax=unknown RepID=UPI0003D5EF19
L3_105_000G1_scaffold_20_5
Clostridium butyricum, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(6589..8082)
DNA (1494bp) protein (498aa)
4-alpha-glucanotransferase {ECO:0000256|RuleBase:RU361207}; EC=2.4.1.25 {ECO:0000256|RuleBase:RU361207};; Amylomaltase {ECO:0000256|RuleBase:RU361207}; Disproportionating enzyme {ECO:0000256|RuleBase:RU361207}; TaxID=1403941 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium butyricum DORA_1.;"
UPI0003D64E3C related cluster n=1 Tax=unknown RepID=UPI0003D64E3C
4-alpha-glucanotransferase
L3_105_000G1_scaffold_20_6
Clostridium butyricum, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(8114..9124)
DNA (1011bp) protein (337aa)
UPI0003D5F7C6 related cluster n=1 Tax=unknown RepID=UPI0003D5F7C6
LacI family transcriptional regulator {ECO:0000313|EMBL:KHD15696.1}; TaxID=1492 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium butyricum.;"
HTH-type transcriptional regulator MalR
L3_105_000G1_scaffold_20_7
Clostridium sp. IBUN125C, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(9513..10457)
DNA (945bp) protein (315aa)
Uncharacterized protein n=1 Tax=Clostridium butyricum 60E.3 RepID=N9YUW7_CLOBU
Regulator of polyketide synthase expression {ECO:0000313|EMBL:KJZ87700.1}; TaxID=1523154 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium sp. IBUN125C.;"
PucR family transcriptional regulator
L3_105_000G1_scaffold_20_8
Clostridium butyricum, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(10507..11616)
DNA (1110bp) protein (370aa)
Multiple sugar-binding transport ATP-binding protein MsmK n=3 Tax=Clostridium butyricum RepID=B1QWY4_CLOBU
Multiple sugar-binding transport ATP-binding protein MsmK {ECO:0000313|EMBL:EEP55572.1}; TaxID=632245 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium butyricum E4 str. BoNT E BL5262.;"
ABC transporter
L3_105_000G1_scaffold_20_9
Clostridium butyricum, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(11946..12704)
DNA (759bp) protein (253aa)
UPI0003D64696 related cluster n=1 Tax=unknown RepID=UPI0003D64696
Transglutaminase protein {ECO:0000313|EMBL:ETI89029.1}; TaxID=1403941 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium butyricum DORA_1.;"
transglutaminase domain protein
L3_105_000G1_scaffold_20_10
Clostridium sp. IBUN125C, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(13361..13696)
DNA (336bp) protein (112aa)
UPI0003D66173 related cluster n=1 Tax=unknown RepID=UPI0003D66173
Uncharacterized protein {ECO:0000313|EMBL:KJZ87696.1}; TaxID=1523154 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium sp. IBUN125C.;"
hypothetical protein
L3_105_000G1_scaffold_20_11
Clostridium butyricum, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(13771..14562)
DNA (792bp) protein (264aa)
Putative GTP cyclohydrolase 1 type 2 {ECO:0000256|RuleBase:RU004385}; EC=3.5.4.16 {ECO:0000256|RuleBase:RU004385};; GTP cyclohydrolase I {ECO:0000256|RuleBase:RU004385}; TaxID=1492 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium butyricum.;"
UPI0003D6859D related cluster n=1 Tax=unknown RepID=UPI0003D6859D
hypothetical protein
L3_105_000G1_scaffold_20_12
Clostridium sp. IBUN125C, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(14575..15267)
DNA (693bp) protein (231aa)
trmK; tRNA (adenine(22)-N(1))-methyltransferase TrmK (EC:2.1.1.217)
UPI0003D5B821 related cluster n=1 Tax=unknown RepID=UPI0003D5B821
Putative tRNA-m1A22 methylase {ECO:0000313|EMBL:KJZ87641.1}; TaxID=1523154 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium sp. IBUN125C.;"
L3_105_000G1_scaffold_20_13
Clostridium butyricum, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(15376..16485)
DNA (1110bp) protein (370aa)
RNA polymerase sigma factor SigA n=1 Tax=Clostridium butyricum DKU-01 RepID=M8K2D3_CLOBU
RNA polymerase sigma factor SigA {ECO:0000256|HAMAP-Rule:MF_00963}; TaxID=1492 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium butyricum.;"
RNA polymerase sigma factor RpoD
L3_105_000G1_scaffold_20_14
Clostridium butyricum, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(16522..18297)
DNA (1776bp) protein (592aa)
DNA primase {ECO:0000256|HAMAP-Rule:MF_00974, ECO:0000256|PIRNR:PIRNR002811}; EC=2.7.7.- {ECO:0000256|HAMAP-Rule:MF_00974, ECO:0000256|PIRNR:PIRNR002811};; TaxID=1492 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium butyricum.;"
dnaG; DNA primase DnaG (EC:2.7.7.-)
DNA primase n=3 Tax=Clostridium butyricum RepID=B1QWZ0_CLOBU
L3_105_000G1_scaffold_20_15
Clostridium butyricum, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(18507..19532)
DNA (1026bp) protein (342aa)
UPI0003D62CC0 related cluster n=1 Tax=unknown RepID=UPI0003D62CC0
Deoxyguanosinetriphosphate triphosphohydrolase {ECO:0000313|EMBL:KHD15712.1}; TaxID=1492 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium butyricum.;"
deoxyguanosinetriphosphate triphosphohydrolase-like protein
L3_105_000G1_scaffold_20_16
Clostridium butyricum, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

19860..20906
DNA (1047bp) protein (349aa)
Spore coat protein S n=4 Tax=Clostridium butyricum RepID=B1QWZ2_CLOBU
Spore coat protein, CotS family {ECO:0000313|EMBL:KHD15713.1}; TaxID=1492 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium butyricum.;"
spore coat protein CotS
L3_105_000G1_scaffold_20_17
Clostridium butyricum, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(21142..23769)
DNA (2628bp) protein (876aa)
Pyruvate phosphate dikinase {ECO:0000313|EMBL:KHD15714.1}; EC=2.7.9.1 {ECO:0000313|EMBL:KHD15714.1};; TaxID=1492 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium butyricum.;"
ppdK; pyruvate, phosphate dikinase PpdK (EC:2.7.9.1)
Pyruvate phosphate dikinase n=2 Tax=Clostridium butyricum RepID=B1QWZ3_CLOBU
L3_105_000G1_scaffold_20_18
Clostridium sp. IBUN125C, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(23877..24563)
DNA (687bp) protein (229aa)
UPI00016BA2A8 related cluster n=1 Tax=unknown RepID=UPI00016BA2A8
Uncharacterized protein {ECO:0000313|EMBL:KJZ87652.1}; TaxID=1523154 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium sp. IBUN125C.;"
ccpN; transcriptional repressor CcpN
L3_105_000G1_scaffold_20_19
Clostridium butyricum, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(24700..25332)
DNA (633bp) protein (211aa)
UPI0003D59AC0 related cluster n=1 Tax=unknown RepID=UPI0003D59AC0
Ubiquitin {ECO:0000313|EMBL:KHD15715.1}; TaxID=1492 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium butyricum.;"
ubiquitin-associated domain-containing protein
L3_105_000G1_scaffold_20_20
Clostridium sp. IBUN125C, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(25339..26088)
DNA (750bp) protein (250aa)
DNA repair protein RecO n=1 Tax=Clostridium butyricum DKU-01 RepID=M8JH28_CLOBU
DNA repair protein RecO {ECO:0000256|HAMAP-Rule:MF_00201, ECO:0000256|SAAS:SAAS00018750}; Recombination protein O {ECO:0000256|HAMAP-Rule:MF_00201}; TaxID=1523154 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium sp. IBUN125C.;"
recO; DNA repair protein RecO
L3_105_000G1_scaffold_20_21
Clostridium butyricum, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(26092..26982)
DNA (891bp) protein (297aa)
GTPase Era n=2 Tax=Clostridium butyricum RepID=M8J6U1_CLOBU
GTPase Era {ECO:0000256|HAMAP-Rule:MF_00367, ECO:0000256|SAAS:SAAS00085723}; TaxID=997898 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium butyricum 60E.3.;"
era; GTPase Era
L3_105_000G1_scaffold_20_22
Clostridium butyricum, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(27348..28049)
DNA (702bp) protein (234aa)
Diacylglycerol kinase/PAP2 family protein n=4 Tax=Clostridium butyricum RepID=B1QWZ8_CLOBU
Diacylglycerol kinase {ECO:0000313|EMBL:EEP55502.1}; TaxID=632245 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium butyricum E4 str. BoNT E BL5262.;"
diacylglycerol kinase/PAP2 family protein
L3_105_000G1_scaffold_20_23
Clostridium butyricum, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(28134..28640)
DNA (507bp) protein (169aa)
Endoribonuclease YbeY {ECO:0000256|HAMAP-Rule:MF_00009, ECO:0000256|SAAS:SAAS00023089}; EC=3.1.-.- {ECO:0000256|HAMAP-Rule:MF_00009, ECO:0000256|SAAS:SAAS00023108};; TaxID=1492 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium butyricum.;"
ybeY; endoribonuclease YbeY (EC:3.1.-.-)
Endoribonuclease YbeY n=4 Tax=Clostridium butyricum RepID=B1QWZ9_CLOBU
L3_105_000G1_scaffold_20_24
Clostridium butyricum, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(28637..30769)
DNA (2133bp) protein (711aa)
Membrane protein containing HD superfamily hydrolase domain n=2 Tax=Clostridium butyricum RepID=B1QX00_CLOBU
Phosphohydrolase {ECO:0000313|EMBL:KHD15720.1}; TaxID=1492 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium butyricum.;"
putative domain HDIG-containing protein
L3_105_000G1_scaffold_20_25
Clostridium butyricum, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(30800..31930)
DNA (1131bp) protein (377aa)
Sporulation protein YqfD n=2 Tax=Clostridium butyricum RepID=B1QX01_CLOBU
Stage IV sporulation protein {ECO:0000313|EMBL:KHD15721.1}; TaxID=1492 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium butyricum.;"
yqfD; sporulation protein YqfD
L3_105_000G1_scaffold_20_26
Clostridium butyricum, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(31927..32214)
DNA (288bp) protein (96aa)
UPI0003D63980 related cluster n=1 Tax=unknown RepID=UPI0003D63980
Sporulation protein {ECO:0000313|EMBL:KHD15722.1}; TaxID=1492 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium butyricum.;"
yqfC; sporulation protein YqfC
L3_105_000G1_scaffold_20_27
Clostridium butyricum, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(32410..32862)
DNA (453bp) protein (151aa)
UPI0003D5AE46 related cluster n=1 Tax=unknown RepID=UPI0003D5AE46
Aspartyl-tRNA amidotransferase {ECO:0000313|EMBL:KHD15723.1}; TaxID=1492 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium butyricum.;"
hypothetical protein
L3_105_000G1_scaffold_20_28
Clostridium butyricum, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(32895..33071)
DNA (177bp) protein (59aa)
Ribosomal protein S21 n=5 Tax=Clostridium RepID=U5MND2_CLOSA
ribosomal protein S21
30S ribosomal protein S21 {ECO:0000256|HAMAP-Rule:MF_00358, ECO:0000256|RuleBase:RU000667}; TaxID=632245 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium butyricum E4 str. BoNT E BL5262.;"
L3_105_000G1_scaffold_20_29
Clostridium butyricum, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(33207..33551)
DNA (345bp) protein (115aa)
Histidine triad nucleotide-binding protein 2 n=4 Tax=Clostridium butyricum RepID=B1QX05_CLOBU
HIT family hydrolase {ECO:0000313|EMBL:KHD15725.1}; TaxID=1492 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium butyricum.;"
HIT-like protein
L3_105_000G1_scaffold_20_30
Clostridium butyricum, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(33713..35113)
DNA (1401bp) protein (467aa)
mtaB; threonylcarbamoyladenosine tRNA methylthiotransferase MtaB (EC:2.-.-.-)
MiaB-like tRNA modifying enzyme n=1 Tax=Clostridium butyricum 60E.3 RepID=R0AF33_CLOBU
RNA modification enzyme MiaB {ECO:0000313|EMBL:KHD15726.1}; TaxID=1492 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium butyricum.;"
Displaying items 1-30 of 203 in total

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