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L3_105_000G1_scaffold_22

Search features with annotation key words

Displaying items 1-30 of 174 in total
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
L3_105_000G1_scaffold_22_1
Bacteroides plebeius, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

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230..766
DNA (537bp) protein (179aa)
Uncharacterized protein n=2 Tax=Bacteroides RepID=R5W7D2_9BACE
Putative ACR, COG1399 {ECO:0000313|EMBL:EDY97044.1}; TaxID=484018 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides.;" source="Bacteroides plebeius (strain DSM 17135 / JCM 12973 / M2).;"
hypothetical protein
L3_105_000G1_scaffold_22_2
Bacteroides plebeius, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

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782..967
DNA (186bp) protein (62aa)
50S ribosomal protein L32 n=4 Tax=Bacteroides RepID=B5CUQ5_BACPM
50S ribosomal protein L32 {ECO:0000256|HAMAP-Rule:MF_00340}; TaxID=484018 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides.;" source="Bacteroides plebeius (strain DSM 17135 / JCM 12973 / M2).;"
50S ribosomal protein L32
L3_105_000G1_scaffold_22_3
Bacteroides coprocola, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

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1076..2077
DNA (1002bp) protein (334aa)
3-oxoacyl-[acyl-carrier-protein] synthase 3 {ECO:0000256|HAMAP-Rule:MF_01815}; EC=2.3.1.180 {ECO:0000256|HAMAP-Rule:MF_01815};; 3-oxoacyl-[acyl-carrier-protein] synthase III {ECO:0000256|HAMAP-Rule:MF_01815}; Beta-ketoacyl-ACP synthase III {ECO:0000256|HAMAP-Rule:MF_01815}; TaxID=470145 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides.;" source="Bacteroides coprocola DSM 17136.;"
3-oxoacyl-ACP synthase (EC:2.3.1.41)
3-oxoacyl-[acyl-carrier-protein] synthase 3 n=2 Tax=Bacteroides RepID=B3JLU9_9BACE
L3_105_000G1_scaffold_22_4
Bacteroides sp. CAG:875, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

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2160..3041
DNA (882bp) protein (294aa)
GTPase Era n=1 Tax=Bacteroides sp. CAG:875 RepID=R6ZPL2_9BACE
GTPase Era {ECO:0000256|HAMAP-Rule:MF_00367, ECO:0000256|SAAS:SAAS00085723}; TaxID=1262752 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides; environmental samples.;" source="Bacteroides sp. CAG:875.;"
era; GTP-binding protein Era
L3_105_000G1_scaffold_22_5
Bacteroides coprocola CAG:162, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

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3075..4388
DNA (1314bp) protein (438aa)
GTPase Der n=2 Tax=Bacteroides RepID=B3JLV1_9BACE
GTPase Der {ECO:0000256|HAMAP-Rule:MF_00195, ECO:0000256|RuleBase:RU004481}; GTP-binding protein EngA {ECO:0000256|HAMAP-Rule:MF_00195}; TaxID=1263040 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides; environmental samples.;" source="Bacteroides coprocola CAG:162.;"
GTP-binding protein engA
L3_105_000G1_scaffold_22_6
Bacteroides coprocola CAG:162, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

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comp(4503..6518)
DNA (2016bp) protein (672aa)
Xylan alpha-1,2-glucuronidase {ECO:0000256|RuleBase:RU361198}; EC=3.2.1.131 {ECO:0000256|RuleBase:RU361198};; TaxID=1263040 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides; environmental samples.;" source="Bacteroides coprocola CAG:162.;"
Uncharacterized protein n=1 Tax=Bacteroides coprocola CAG:162 RepID=R6CDT5_9BACE
alpha-glycosidase
L3_105_000G1_scaffold_22_7
Bacteroides coprocola CAG:162, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

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comp(6515..7489)
DNA (975bp) protein (325aa)
Uncharacterized protein n=1 Tax=Bacteroides coprocola CAG:162 RepID=R6CQL0_9BACE
Uncharacterized protein {ECO:0000313|EMBL:CDA73796.1}; TaxID=1263040 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides; environmental samples.;" source="Bacteroides coprocola CAG:162.;"
alpha-N-arabinofuranosidase
L3_105_000G1_scaffold_22_8
Bacteroides sp. CAG:702, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

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comp(7498..8625)
DNA (1128bp) protein (376aa)
Beta-xylanase {ECO:0000256|RuleBase:RU361174}; EC=3.2.1.8 {ECO:0000256|RuleBase:RU361174};; TaxID=1262747 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides; environmental samples.;" source="Bacteroides sp. CAG:702.;"
endo-1,4-beta-xylanase (EC:3.2.1.8)
Beta-1 4-xylanase n=1 Tax=Bacteroides sp. CAG:702 RepID=R5TWH7_9BACE
L3_105_000G1_scaffold_22_9
Bacteroides coprocola CAG:162, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

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comp(8646..10142)
DNA (1497bp) protein (499aa)
Transport protein n=1 Tax=Bacteroides coprocola CAG:162 RepID=R6CB11_9BACE
Transport protein {ECO:0000313|EMBL:CDA73798.1}; TaxID=1263040 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides; environmental samples.;" source="Bacteroides coprocola CAG:162.;"
sugar transporter
L3_105_000G1_scaffold_22_10
Bacteroides sp. CAG:702, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

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comp(10155..11789)
DNA (1635bp) protein (545aa)
Domain of unknown function (DUF303). (EC:3.1.1.53)
Uncharacterized protein n=1 Tax=Bacteroides sp. CAG:702 RepID=R5TWM6_9BACE
Uncharacterized protein {ECO:0000313|EMBL:CCZ70145.1}; TaxID=1262747 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides; environmental samples.;" source="Bacteroides sp. CAG:702.;"
L3_105_000G1_scaffold_22_11
Bacteroides coprocola, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

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comp(12004..12342)
DNA (339bp) protein (113aa)
Putative translation initiation factor SUI1 n=2 Tax=Bacteroides RepID=B3JJW8_9BACE
Putative translation initiation factor SUI1 {ECO:0000313|EMBL:EDV00724.1}; TaxID=470145 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides.;" source="Bacteroides coprocola DSM 17136.;"
translation initiation factor SUI1
L3_105_000G1_scaffold_22_12
Bacteroides sp. CAG:875, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

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12515..13195
DNA (681bp) protein (227aa)
Redox-sensing transcriptional repressor Rex n=1 Tax=Bacteroides sp. CAG:875 RepID=R7A2R6_9BACE
Redox-sensing transcriptional repressor Rex {ECO:0000256|HAMAP-Rule:MF_01131}; TaxID=1262752 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides; environmental samples.;" source="Bacteroides sp. CAG:875.;"
REX family transcriptional regulator
L3_105_000G1_scaffold_22_13
Bacteroides coprocola CAG:162, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

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13211..13828
DNA (618bp) protein (206aa)
FAH family protein n=1 Tax=Bacteroides coprocola CAG:162 RepID=R6C520_9BACE
FAH family protein {ECO:0000313|EMBL:CDA70570.1}; TaxID=1263040 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides; environmental samples.;" source="Bacteroides coprocola CAG:162.;"
fumarylacetoacetate (FAA) hydrolase
L3_105_000G1_scaffold_22_14
Bacteroides coprophilus CAG:333, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

13825..14304
DNA (480bp) protein (160aa)
2-C-methyl-D-erythritol 2,4-cyclodiphosphate synthase {ECO:0000256|HAMAP-Rule:MF_00107, ECO:0000256|RuleBase:RU004395}; Short=MECDP-synthase {ECO:0000256|HAMAP-Rule:MF_00107};; Short=MECPP-synthase {ECO:0000256|HAMAP-Rule:MF_00107};; Short=MECPS {ECO:0000256|HAMAP-Rule:MF_00107};; EC=4.6.1.12 {ECO:0000256|HAMAP-Rule:MF_00107, ECO:0000256|RuleBase:RU004395};; TaxID=1263041 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides; environmental samples.;" source="Bacteroides coprophilus CAG:333.;"
2-C-methyl-D-erythritol 2,4-cyclodiphosphate synthase n=2 Tax=Bacteroides RepID=R6S8K8_9BACE
2-C-methyl-D-erythritol 2,4-cyclodiphosphate synthase
L3_105_000G1_scaffold_22_15
Bacteroides plebeius, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(14796..15860)
DNA (1065bp) protein (355aa)
Peptidase dimerization domain protein n=1 Tax=Bacteroides plebeius (strain DSM 17135 / JCM 12973 / M2) RepID=B5CUU3_BACPM
Peptidase dimerization domain protein {ECO:0000313|EMBL:EDY97083.1}; TaxID=484018 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides.;" source="Bacteroides plebeius (strain DSM 17135 / JCM 12973 / M2).;"
peptidase/deacetylase
L3_105_000G1_scaffold_22_16
Bacteroides sp. CAG:875, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

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16072..17877
DNA (1806bp) protein (602aa)
long-chain-fatty-acid--CoA ligase (EC:6.2.1.3)
Uncharacterized protein n=1 Tax=Bacteroides sp. CAG:875 RepID=R7A4B8_9BACE
Uncharacterized protein {ECO:0000313|EMBL:CDD50339.1}; TaxID=1262752 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides; environmental samples.;" source="Bacteroides sp. CAG:875.;"
L3_105_000G1_scaffold_22_17
Bacteroides sp. CAG:714, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

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17938..19053
DNA (1116bp) protein (372aa)
Peptidyl-tRNA hydrolase domain protein n=1 Tax=Bacteroides sp. CAG:714 RepID=R6ZT10_9BACE
Peptidyl-tRNA hydrolase domain protein {ECO:0000313|EMBL:CDD33597.1}; TaxID=1262749 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides; environmental samples.;" source="Bacteroides sp. CAG:714.;"
class I peptide chain release factor
L3_105_000G1_scaffold_22_18
Bacteroides plebeius CAG:211, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

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19130..19273
DNA (144bp) protein (48aa)
Uncharacterized protein n=2 Tax=Bacteroides RepID=B5CUU6_BACPM
Uncharacterized protein {ECO:0000313|EMBL:CCZ86560.1}; TaxID=1263052 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides; environmental samples.;" source="Bacteroides plebeius CAG:211.;"
L3_105_000G1_scaffold_22_19
Bacteroides sp. CAG:1076, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

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19430..19945
DNA (516bp) protein (172aa)
Adenylate cyclase n=1 Tax=Bacteroides sp. CAG:1076 RepID=R5MKD6_9BACE
Adenylate cyclase {ECO:0000313|EMBL:CCY92205.1}; TaxID=1262735 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides; environmental samples.;" source="Bacteroides sp. CAG:1076.;"
hypothetical protein
L3_105_000G1_scaffold_22_20
Bacteroides coprocola CAG:162, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

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20080..20583
DNA (504bp) protein (168aa)
Sigma-70 region 2 n=2 Tax=Bacteroides RepID=B3JFG2_9BACE
Sigma-70 region 2 {ECO:0000313|EMBL:CDA72903.1}; TaxID=1263040 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides; environmental samples.;" source="Bacteroides coprocola CAG:162.;"
RNA polymerase sigma factor
L3_105_000G1_scaffold_22_21
unknown

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20649..20750
DNA (102bp) protein (34aa)

This feature has no annotations

L3_105_000G1_scaffold_22_22
Bacteroides coprophilus CAG:333, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(20739..21140)
DNA (402bp) protein (134aa)
Uncharacterized protein n=1 Tax=Bacteroides coprophilus CAG:333 RepID=R6SK22_9BACE
Uncharacterized protein {ECO:0000313|EMBL:CDC55771.1}; TaxID=1263041 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides; environmental samples.;" source="Bacteroides coprophilus CAG:333.;"
membrane protein
L3_105_000G1_scaffold_22_23
Bacteroides coprophilus CAG:333, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

21232..22605
DNA (1374bp) protein (458aa)
Transporter n=2 Tax=Bacteroides RepID=R6S3L2_9BACE
Transporter {ECO:0000256|RuleBase:RU003732}; TaxID=1263041 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides; environmental samples.;" source="Bacteroides coprophilus CAG:333.;"
Na+-dependent transporter
L3_105_000G1_scaffold_22_24
Bacteroides sp. CAG:443, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

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22612..23520
DNA (909bp) protein (303aa)
Uncharacterized protein n=1 Tax=Bacteroides sp. CAG:443 RepID=R6MX50_9BACE
Uncharacterized protein {ECO:0000313|EMBL:CDC00444.1}; TaxID=1262739 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides; environmental samples.;" source="Bacteroides sp. CAG:443.;"
helix-hairpin-helix motif protein
L3_105_000G1_scaffold_22_25
Bacteroides sp. CAG:714, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(23522..24940)
DNA (1419bp) protein (473aa)
Uncharacterized protein n=1 Tax=Bacteroides sp. CAG:714 RepID=R6YI96_9BACE
Uncharacterized protein {ECO:0000313|EMBL:CDD33590.1}; TaxID=1262749 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides; environmental samples.;" source="Bacteroides sp. CAG:714.;"
alkaline phosphatase III
L3_105_000G1_scaffold_22_26
Bacteroides plebeius CAG:211, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

25097..26062
DNA (966bp) protein (322aa)
Uncharacterized protein n=1 Tax=Bacteroides plebeius CAG:211 RepID=R5VDV1_9BACE
Uncharacterized protein {ECO:0000313|EMBL:CCZ86104.1}; TaxID=1263052 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides; environmental samples.;" source="Bacteroides plebeius CAG:211.;"
hypothetical protein
L3_105_000G1_scaffold_22_27
Bacteroides coprophilus CAG:333, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

26313..26882
DNA (570bp) protein (190aa)
Xanthine phosphoribosyltransferase {ECO:0000256|HAMAP-Rule:MF_01184, ECO:0000256|SAAS:SAAS00064502}; Short=XPRTase {ECO:0000256|HAMAP-Rule:MF_01184};; EC=2.4.2.22 {ECO:0000256|HAMAP-Rule:MF_01184, ECO:0000256|SAAS:SAAS00064502};; TaxID=1263041 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides; environmental samples.;" source="Bacteroides coprophilus CAG:333.;"
Xanthine phosphoribosyltransferase (EC:2.4.2.22)
Xanthine phosphoribosyltransferase n=2 Tax=Bacteroides RepID=R6SK15_9BACE
L3_105_000G1_scaffold_22_28
Bacteroides sp. CAG:875, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

26893..28227
DNA (1335bp) protein (445aa)
Uncharacterized protein n=1 Tax=Bacteroides plebeius CAG:211 RepID=R5W022_9BACE
Uncharacterized protein {ECO:0000313|EMBL:CDD50311.1}; TaxID=1262752 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides; environmental samples.;" source="Bacteroides sp. CAG:875.;"
xanthine permease
L3_105_000G1_scaffold_22_29

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comp(28419..30452)
DNA (2034bp) protein (678aa)
Outer membrane protein probably involved in nutrient binding protein n=1 Tax=gut metagenome RepID=J9D8E6_9ZZZZ
Outer membrane protein probably involved in nutrient binding protein {ECO:0000313|EMBL:EJX09051.1}; TaxID=749906 species="unclassified sequences; metagenomes; organismal metagenomes.;" source="gut metagenome.;"
hypothetical protein
L3_105_000G1_scaffold_22_30

Not on your lists

comp(30465..33623)
DNA (3159bp) protein (1053aa)
TonB-dependent receptor plug domain protein n=1 Tax=gut metagenome RepID=J9GM83_9ZZZZ
TonB-dependent receptor plug domain protein {ECO:0000313|EMBL:EJX09052.1}; TaxID=749906 species="unclassified sequences; metagenomes; organismal metagenomes.;" source="gut metagenome.;"
membrane protein
Displaying items 1-30 of 174 in total

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