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L3_105_000G1_scaffold_33

Search features with annotation key words

Displaying items 1-30 of 147 in total
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
L3_105_000G1_scaffold_33_1
[Clostridium] clostridioforme, Lachnoclostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

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comp(2..568)
DNA (567bp) protein (189aa)
Uncharacterized protein n=7 Tax=Clostridium RepID=A8RJM4_9CLOT
LysR family transcriptional regulator {ECO:0000313|EMBL:ENZ14749.1}; TaxID=999407 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae.;" source="[Clostridium] clostridioforme 90A7.;"
Transcriptional regulator
L3_105_000G1_scaffold_33_2
Ruminococcus sp. CAG:17, Ruminococcus, Clostridiales, Clostridia, Firmicutes, Bacteria

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813..2027
DNA (1215bp) protein (405aa)
Sodium:dicarboxylate symporter n=2 Tax=Clostridiales RepID=R5NQD5_9FIRM
Sodium:dicarboxylate symporter {ECO:0000313|EMBL:CCY99162.1}; TaxID=1262951 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminococcus; environmental samples.;" source="Ruminococcus sp. CAG:17.;"
Na+/H+-dicarboxylate symporters
L3_105_000G1_scaffold_33_3
Lachnospiraceae bacterium 8_1_57FAA, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

2042..2710
DNA (669bp) protein (223aa)
L-serine ammonia-lyase (EC:4.3.1.17)
L-serine dehydratase, iron-sulfur-dependent, beta subunit n=5 Tax=Clostridiales RepID=A5KJD4_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:EFV20682.1}; TaxID=665951 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae.;" source="Lachnospiraceae bacterium 8_1_57FAA.;"
L3_105_000G1_scaffold_33_4
Faecalibacterium prausnitzii, Faecalibacterium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

2759..3646
DNA (888bp) protein (296aa)
L-serine dehydratase, iron-sulfur-dependent, alpha subunit {ECO:0000313|EMBL:EFQ08451.1}; EC=4.3.1.17 {ECO:0000313|EMBL:EFQ08451.1};; TaxID=748224 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Faecalibacterium.;" source="Faecalibacterium cf. prausnitzii KLE1255.;"
L-serine dehydratase, iron-sulfur-dependent, alpha subunit (EC:4.3.1.17)
L-serine dehydratase, iron-sulfur-dependent, alpha subunit n=1 Tax=Faecalibacterium cf. prausnitzii KLE1255 RepID=E2ZED3_9FIRM
L3_105_000G1_scaffold_33_5
Lachnospiraceae bacterium A4, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(3795..5045)
DNA (1251bp) protein (417aa)
Uncharacterized protein n=1 Tax=Lachnospiraceae bacterium A4 RepID=R9IEL9_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:EOS19310.1}; TaxID=397291 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae.;" source="Lachnospiraceae bacterium A4.;"
hypothetical protein
L3_105_000G1_scaffold_33_6
[Clostridium] asparagiforme, Lachnoclostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(5134..5895)
DNA (762bp) protein (254aa)
Uncharacterized protein (Fragment) n=1 Tax=Clostridium asparagiforme DSM 15981 RepID=C0D9T1_9CLOT
Uncharacterized protein {ECO:0000313|EMBL:EEG51924.1}; Flags: Fragment;; TaxID=518636 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae.;" source="[Clostridium asparagiforme] DSM 15981.;"
Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase.
L3_105_000G1_scaffold_33_7
Clostridium bolteae CAG:59, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(5892..6767)
DNA (876bp) protein (292aa)
Uncharacterized protein n=1 Tax=Clostridium clostridioforme 90A7 RepID=N9XH16_9CLOT
Uncharacterized protein {ECO:0000313|EMBL:CCX99373.1}; TaxID=1263064 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium; environmental samples.;" source="Clostridium bolteae CAG:59.;"
L3_105_000G1_scaffold_33_8
[Clostridium] asparagiforme, Lachnoclostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(6769..7482)
DNA (714bp) protein (238aa)
LytTr DNA-binding domain protein n=1 Tax=Clostridium asparagiforme DSM 15981 RepID=C0D9U2_9CLOT
LytTr DNA-binding domain protein {ECO:0000313|EMBL:EEG51887.1}; TaxID=518636 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae.;" source="[Clostridium asparagiforme] DSM 15981.;"
Two-component system transcriptional regulator
L3_105_000G1_scaffold_33_9
Clostridium sp. FS41, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

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7708..9102
DNA (1395bp) protein (465aa)
Probable 2-(5''-triphosphoribosyl)-3'-dephosphocoenzyme-A synthase {ECO:0000256|HAMAP-Rule:MF_00397}; Short=2-(5''-triphosphoribosyl)-3'-dephospho-CoA synthase {ECO:0000256|HAMAP-Rule:MF_00397};; EC=2.4.2.52 {ECO:0000256|HAMAP-Rule:MF_00397};; TaxID=1609975 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium sp. FS41.;"
holo-ACP synthase CitX/triphosphoribosyl-dephospho-CoA synthase CitG (EC:2.7.8.25)
Putative uncharacterized protein n=1 Tax=Clostridium citroniae WAL-17108 RepID=G5HDU0_9CLOT
L3_105_000G1_scaffold_33_10
[Clostridium] asparagiforme, Lachnoclostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(9097..9642)
DNA (546bp) protein (182aa)
Uncharacterized protein n=1 Tax=Clostridium asparagiforme DSM 15981 RepID=C0CTV3_9CLOT
Uncharacterized protein {ECO:0000313|EMBL:EEG57598.1}; TaxID=518636 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae.;" source="[Clostridium asparagiforme] DSM 15981.;"
hypothetical protein
L3_105_000G1_scaffold_33_11
Marvinbryantia formatexigens, Marvinbryantia, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(9639..11174)
DNA (1536bp) protein (512aa)
ImpB/MucB/SamB family protein n=1 Tax=Marvinbryantia formatexigens DSM 14469 RepID=C6LEH6_9FIRM
ImpB/MucB/SamB family protein {ECO:0000313|EMBL:EET60959.1}; TaxID=478749 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Marvinbryantia.;" source="Marvinbryantia formatexigens DSM 14469.;"
Nucleotidyltransferase/DNA polymerase involved in DNA repair
L3_105_000G1_scaffold_33_12
Clostridium clostridioforme CAG:511, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(11222..11731)
DNA (510bp) protein (170aa)
ADP-ribose pyrophosphatase (EC:3.6.1.-)
Uncharacterized protein n=6 Tax=Clostridium clostridioforme RepID=N9W1C4_9CLOT
Uncharacterized protein {ECO:0000313|EMBL:CDF25524.1}; TaxID=1263066 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium; environmental samples.;" source="Clostridium clostridioforme CAG:511.;"
L3_105_000G1_scaffold_33_13
Faecalibacterium sp. CAG:1138, Faecalibacterium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

12526..13992
DNA (1467bp) protein (489aa)
ABC superfamily ATP binding cassette transporter n=1 Tax=Faecalibacterium sp. CAG:1138 RepID=R5FLH3_9FIRM
ABC superfamily ATP binding cassette transporter {ECO:0000313|EMBL:CCY04484.1}; TaxID=1262896 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Faecalibacterium; environmental samples.;" source="Faecalibacterium sp. CAG:1138.;"
ABC transporter ATP-binding protein
L3_105_000G1_scaffold_33_14
[Clostridium] clostridioforme, Lachnoclostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

14080..14370
DNA (291bp) protein (97aa)
Putative uncharacterized protein n=1 Tax=Clostridium clostridioforme 2_1_49FAA RepID=G5HUK0_9CLOT
Uncharacterized protein {ECO:0000313|EMBL:ENZ66794.1}; TaxID=999406 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae.;" source="[Clostridium] clostridioforme 90A6.;"
L3_105_000G1_scaffold_33_15
unknown

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14503..14652
DNA (150bp) protein (50aa)

This feature has no annotations

L3_105_000G1_scaffold_33_16
Clostridium sp. CAG:7, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(14965..15975)
DNA (1011bp) protein (337aa)
Uncharacterized protein n=1 Tax=Clostridium sp. CAG:7 RepID=R5ID34_9CLOT
Uncharacterized protein {ECO:0000313|EMBL:CCY39988.1}; TaxID=1262832 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium; environmental samples.;" source="Clostridium sp. CAG:7.;"
hypothetical protein
L3_105_000G1_scaffold_33_17
Clostridiales bacterium 1_7_47FAA, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(16003..16695)
DNA (693bp) protein (231aa)
Uncharacterized protein n=1 Tax=Clostridiales bacterium 1_7_47FAA RepID=C5ENM3_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:EEQ59753.1}; TaxID=457421 species="Bacteria; Firmicutes; Clostridia; Clostridiales.;" source="Clostridiales bacterium 1_7_47FAA.;"
hypothetical protein
L3_105_000G1_scaffold_33_18
[Clostridium] clostridioforme, Lachnoclostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(16827..29087)
DNA (12261bp) protein (4087aa)
SrtB family sortase n=6 Tax=Clostridium clostridioforme RepID=N9WSN1_9CLOT
SrtB family sortase {ECO:0000313|EMBL:ENZ63208.1}; TaxID=999406 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae.;" source="[Clostridium] clostridioforme 90A6.;"
LPXTG-motif cell wall anchor domain-containing protein
L3_105_000G1_scaffold_33_19
[Clostridium] citroniae, Lachnoclostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(29526..30791)
DNA (1266bp) protein (422aa)
Putative uncharacterized protein n=1 Tax=Clostridium citroniae WAL-17108 RepID=G5HG59_9CLOT
Uncharacterized protein {ECO:0000313|EMBL:EHE99438.1}; TaxID=742733 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae.;" source="[Clostridium] citroniae WAL-17108.;"
hypothetical protein
L3_105_000G1_scaffold_33_20
Clostridium bolteae CAG:59, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(30755..32017)
DNA (1263bp) protein (421aa)
Uncharacterized protein n=1 Tax=Clostridium bolteae CAG:59 RepID=R5F6F7_9CLOT
Uncharacterized protein {ECO:0000313|EMBL:CCY00615.1}; TaxID=1263064 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium; environmental samples.;" source="Clostridium bolteae CAG:59.;"
hypothetical protein
L3_105_000G1_scaffold_33_21
Clostridiales bacterium 1_7_47FAA, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(32111..33322)
DNA (1212bp) protein (404aa)
Efflux ABC transporter, permease protein n=1 Tax=Clostridiales bacterium 1_7_47FAA RepID=C5EPW2_9FIRM
Efflux ABC transporter, permease protein {ECO:0000313|EMBL:EEQ59504.1}; TaxID=457421 species="Bacteria; Firmicutes; Clostridia; Clostridiales.;" source="Clostridiales bacterium 1_7_47FAA.;"
ABC-type antimicrobial peptide transport system, permease component
L3_105_000G1_scaffold_33_22
Clostridiales bacterium 1_7_47FAA, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(33316..34098)
DNA (783bp) protein (261aa)
Macrolide export ATP-binding/permease protein MacB {ECO:0000256|HAMAP-Rule:MF_01720}; EC=3.6.3.- {ECO:0000256|HAMAP-Rule:MF_01720};; TaxID=457421 species="Bacteria; Firmicutes; Clostridia; Clostridiales.;" source="Clostridiales bacterium 1_7_47FAA.;"
ABC transporter, ATP-binding protein n=1 Tax=Clostridiales bacterium 1_7_47FAA RepID=C5EPW1_9FIRM
ABC transporter
L3_105_000G1_scaffold_33_23
[Clostridium] clostridioforme, Lachnoclostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(34110..35540)
DNA (1431bp) protein (477aa)
Efflux transporter, RND family, MFP subunit n=9 Tax=Clostridium RepID=N9Y0L0_9CLOT
Efflux transporter, RND family, MFP subunit {ECO:0000313|EMBL:ENZ13567.1}; TaxID=999408 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae.;" source="[Clostridium] clostridioforme 90A8.;"
RND family efflux transporter, MFP subunit
L3_105_000G1_scaffold_33_24
Clostridium sp. CAG:7, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(35740..37329)
DNA (1590bp) protein (530aa)
Potassium/proton antiporter n=1 Tax=Clostridium sp. CAG:7 RepID=R5J514_9CLOT
Potassium/proton antiporter {ECO:0000313|EMBL:CCY44121.1}; TaxID=1262832 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium; environmental samples.;" source="Clostridium sp. CAG:7.;"
sodium/hydrogen exchanger
L3_105_000G1_scaffold_33_25
Anaerotruncus sp. G3(2012), Anaerotruncus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(37530..38348)
DNA (819bp) protein (273aa)
Uncharacterized protein n=1 Tax=Anaerotruncus sp. G3(2012) RepID=R9LZ48_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:EOS64085.1}; TaxID=1235835 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Anaerotruncus.;" source="Anaerotruncus sp. G3(2012).;"
fecC; ABC transporter
L3_105_000G1_scaffold_33_26
Anaerotruncus sp. G3(2012), Anaerotruncus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(38345..39229)
DNA (885bp) protein (295aa)
Uncharacterized protein n=1 Tax=Anaerotruncus sp. G3(2012) RepID=R9M082_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:EOS64086.1}; TaxID=1235835 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Anaerotruncus.;" source="Anaerotruncus sp. G3(2012).;"
ABC transporter permease
L3_105_000G1_scaffold_33_27
Anaerotruncus sp. G3(2012), Anaerotruncus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(39412..40434)
DNA (1023bp) protein (341aa)
Uncharacterized protein n=1 Tax=Anaerotruncus sp. G3(2012) RepID=R9M889_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:EOS64087.1}; TaxID=1235835 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Anaerotruncus.;" source="Anaerotruncus sp. G3(2012).;"
ABC-type Fe3+-hydroxamate transport system, periplasmic binding protein
L3_105_000G1_scaffold_33_28
Clostridium clostridioforme CAG:511, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(40783..41757)
DNA (975bp) protein (325aa)
Uncharacterized protein n=9 Tax=Clostridium RepID=N9VIP5_9CLOT
Uncharacterized protein {ECO:0000313|EMBL:CDF24069.1}; TaxID=1263066 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium; environmental samples.;" source="Clostridium clostridioforme CAG:511.;"
ROK family protein
L3_105_000G1_scaffold_33_29
Clostridium clostridioforme CAG:132, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(41870..43513)
DNA (1644bp) protein (548aa)
Uncharacterized protein n=1 Tax=Clostridium clostridioforme CAG:132 RepID=R6JIX3_9CLOT
Uncharacterized protein {ECO:0000313|EMBL:CDB62838.1}; TaxID=1263065 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium; environmental samples.;" source="Clostridium clostridioforme CAG:132.;"
hypothetical protein
L3_105_000G1_scaffold_33_30
Clostridium clostridioforme CAG:132, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(43529..44365)
DNA (837bp) protein (279aa)
Uncharacterized protein n=1 Tax=Clostridium clostridioforme CAG:132 RepID=R6KL31_9CLOT
Uncharacterized protein {ECO:0000313|EMBL:CDB62837.1}; TaxID=1263065 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium; environmental samples.;" source="Clostridium clostridioforme CAG:132.;"
binding-protein-dependent transport system inner membrane protein
Displaying items 1-30 of 147 in total

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