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L3_105_000G1_scaffold_40

Search features with annotation key words

Displaying items 1-30 of 170 in total
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
L3_105_000G1_scaffold_40_1

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588..1535
DNA (948bp) protein (316aa)
Polysaccharide deacetylase family protein n=2 Tax=Clostridium butyricum RepID=B1R2E1_CLOBU
Polysaccharide deacetylase family protein {ECO:0000313|EMBL:ETJ16417.1}; TaxID=408170 species="unclassified sequences; metagenomes; organismal metagenomes.;" source="human gut metagenome.;"
polysaccharide deacetylase
L3_105_000G1_scaffold_40_2

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1852..2337
DNA (486bp) protein (162aa)
RNA polymerase sigma factor n=3 Tax=Clostridium butyricum RepID=B1R2E2_CLOBU
RNA polymerase sigma factor {ECO:0000313|EMBL:ETJ16418.1}; TaxID=408170 species="unclassified sequences; metagenomes; organismal metagenomes.;" source="human gut metagenome.;"
RNA polymerase sigma factor
L3_105_000G1_scaffold_40_3

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2342..3175
DNA (834bp) protein (278aa)
YrhM n=1 Tax=Clostridium butyricum DKU-01 RepID=M8J6R9_CLOBU
YrhM {ECO:0000313|EMBL:ETJ16419.1}; TaxID=408170 species="unclassified sequences; metagenomes; organismal metagenomes.;" source="human gut metagenome.;"
hypothetical protein
L3_105_000G1_scaffold_40_4

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3541..4920
DNA (1380bp) protein (460aa)
TldD protein n=4 Tax=Clostridium butyricum RepID=B1R2E4_CLOBU
TldD protein {ECO:0000313|EMBL:ETJ16420.1}; TaxID=408170 species="unclassified sequences; metagenomes; organismal metagenomes.;" source="human gut metagenome.;"
TldD protein
L3_105_000G1_scaffold_40_5
Clostridium butyricum, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

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4923..6266
DNA (1344bp) protein (448aa)
Peptidase U62, modulator of DNA gyrase n=2 Tax=Clostridium butyricum RepID=M8JFN9_CLOBU
Uncharacterized protein {ECO:0000313|EMBL:ENZ31261.1}; TaxID=997898 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium butyricum 60E.3.;"
pmbA; protein PmbA
L3_105_000G1_scaffold_40_6
Clostridium sp. IBUN13A, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

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comp(6356..7147)
DNA (792bp) protein (264aa)
Uncharacterized protein n=1 Tax=Clostridium butyricum 60E.3 RepID=N9YV05_CLOBU
Uncharacterized protein {ECO:0000313|EMBL:KJZ85474.1}; TaxID=1523156 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium sp. IBUN13A.;"
hypothetical protein
L3_105_000G1_scaffold_40_7
Clostridium butyricum, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

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7270..8229
DNA (960bp) protein (320aa)
Oxidoreductase, pyridine nucleotide-disulphide family n=2 Tax=Clostridium butyricum RepID=B1R2E7_CLOBU
FAD-dependent pyridine nucleotide-disulphide oxidoreductase {ECO:0000313|EMBL:EEP55148.1}; TaxID=632245 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium butyricum E4 str. BoNT E BL5262.;"
fumarate reductase/succinate dehydrogenase flavoprotein domain protein
L3_105_000G1_scaffold_40_8
Clostridium butyricum, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

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comp(8269..8832)
DNA (564bp) protein (188aa)
Lipolytic enzyme, G-D-S-L n=2 Tax=Clostridium butyricum RepID=B1R2E8_CLOBU
Lipolytic protein, G-D-S-L family {ECO:0000313|EMBL:EEP55683.1}; TaxID=632245 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium butyricum E4 str. BoNT E BL5262.;"
lipolytic protein, G-D-S-L family
L3_105_000G1_scaffold_40_9
Clostridium butyricum, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

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comp(8850..9482)
DNA (633bp) protein (211aa)
Endodeoxyribonuclease, RusA family protein n=2 Tax=Clostridium butyricum RepID=B1R2E9_CLOBU
Endodeoxyribonuclease RusA {ECO:0000313|EMBL:EEP55631.1}; TaxID=632245 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium butyricum E4 str. BoNT E BL5262.;"
holliday junction resolvase
L3_105_000G1_scaffold_40_10
Clostridium sp. IBUN13A, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

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9852..10871
DNA (1020bp) protein (340aa)
tRNA N6-adenosine threonylcarbamoyltransferase {ECO:0000256|HAMAP-Rule:MF_01445, ECO:0000256|SAAS:SAAS00018957}; EC=2.3.1.234 {ECO:0000256|HAMAP-Rule:MF_01445, ECO:0000256|SAAS:SAAS00182339};; N6-L-threonylcarbamoyladenine synthase {ECO:0000256|HAMAP-Rule:MF_01445}; t(6)A37 threonylcarbamoyladenosine biosynthesis protein TsaD {ECO:0000256|HAMAP-Rule:MF_01445}; tRNA threonylcarbamoyladenosine biosynthesis protein TsaD {ECO:0000256|HAMAP-Rule:MF_01445}; TaxID=1523156 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium sp. IBUN13A.;"
tRNA N6-adenosine threonylcarbamoyltransferase n=3 Tax=Clostridium butyricum RepID=B1R2F0_CLOBU
gcp; tRNA threonylcarbamoyladenosine biosynthesis protein Gcp
L3_105_000G1_scaffold_40_11
Clostridium butyricum, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

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10880..11884
DNA (1005bp) protein (335aa)
Hydrolase, alpha/beta fold family n=2 Tax=Clostridium butyricum RepID=B1R2F1_CLOBU
Alpha/beta hydrolase {ECO:0000313|EMBL:KHD13691.1}; TaxID=1492 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium butyricum.;"
hypothetical protein
L3_105_000G1_scaffold_40_12
Clostridium sp. IBUN125C, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

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11999..13225
DNA (1227bp) protein (409aa)
Serine protease {ECO:0000313|EMBL:KJZ84957.1}; EC=3.4.21.- {ECO:0000313|EMBL:KJZ84957.1};; TaxID=1523154 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium sp. IBUN125C.;"
htrB; serine protease Do-like HtrB (EC:3.4.21.107)
Peptidase, S1B family n=1 Tax=Clostridium butyricum DKU-01 RepID=M8KAJ2_CLOBU
L3_105_000G1_scaffold_40_13
Clostridium butyricum, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

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13362..13679
DNA (318bp) protein (106aa)
Lichenan-specific phosphotransferase enzyme iia component n=2 Tax=Clostridium butyricum RepID=B1R2F4_CLOBU
PTS cellobiose transporter subunit IIA {ECO:0000313|EMBL:KHD13688.1}; TaxID=1492 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium butyricum.;"
PTS system lactose/cellobiose-specific transporter subunit IIA
L3_105_000G1_scaffold_40_14
Clostridium sp. IBUN13A, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

13759..14118
DNA (360bp) protein (120aa)
Uncharacterized protein n=4 Tax=Clostridium butyricum RepID=B1R2F5_CLOBU
Uncharacterized protein {ECO:0000313|EMBL:KJZ85526.1}; TaxID=1523156 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium sp. IBUN13A.;"
hypothetical protein
L3_105_000G1_scaffold_40_15

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14240..15382
DNA (1143bp) protein (381aa)
Uncharacterized protein n=2 Tax=Clostridium butyricum RepID=B1R2F6_CLOBU
Uncharacterized protein {ECO:0000313|EMBL:ETJ16431.1}; TaxID=408170 species="unclassified sequences; metagenomes; organismal metagenomes.;" source="human gut metagenome.;"
ABC-type sugar transport system periplasmic component-like protein
L3_105_000G1_scaffold_40_16
Clostridium butyricum, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

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comp(15452..16576)
DNA (1125bp) protein (375aa)
Glycosyltransferase n=2 Tax=Clostridium butyricum RepID=B1R2F7_CLOBU
Putative mannosyltransferase {ECO:0000313|EMBL:EEP55608.1}; TaxID=632245 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium butyricum E4 str. BoNT E BL5262.;"
group 1 glycosyl transferase
L3_105_000G1_scaffold_40_17
Clostridium butyricum, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

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16724..17740
DNA (1017bp) protein (339aa)
Spore coat protein S n=2 Tax=Clostridium butyricum RepID=B1R2F8_CLOBU
Spore coat protein CotS {ECO:0000313|EMBL:EEP55489.1}; TaxID=632245 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium butyricum E4 str. BoNT E BL5262.;"
cotS; spore coat protein CotS
L3_105_000G1_scaffold_40_18

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17712..18575
DNA (864bp) protein (288aa)
Putative spore coat protein n=2 Tax=Clostridium butyricum RepID=B1R2F9_CLOBU
Uncharacterized protein {ECO:0000313|EMBL:ETJ16434.1}; TaxID=408170 species="unclassified sequences; metagenomes; organismal metagenomes.;" source="human gut metagenome.;"
hypothetical protein
L3_105_000G1_scaffold_40_19

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18668..19711
DNA (1044bp) protein (348aa)
Spore coat protein CotS n=1 Tax=Clostridium butyricum DKU-01 RepID=M8JGY4_CLOBU
Spore coat protein S {ECO:0000313|EMBL:ETJ16435.1}; TaxID=408170 species="unclassified sequences; metagenomes; organismal metagenomes.;" source="human gut metagenome.;"
spore coat protein, CotS family
L3_105_000G1_scaffold_40_20

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comp(19862..20983)
DNA (1122bp) protein (374aa)
Glycosyl transferase, group 1 n=2 Tax=Clostridium butyricum RepID=M8JFM7_CLOBU
Mannosyltransferase B {ECO:0000313|EMBL:ETJ16436.1}; TaxID=408170 species="unclassified sequences; metagenomes; organismal metagenomes.;" source="human gut metagenome.;"
glycosyl transferase, group 1
L3_105_000G1_scaffold_40_21

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21092..22159
DNA (1068bp) protein (356aa)
Spore coat protein CotS n=4 Tax=Clostridium butyricum RepID=B1R2G2_CLOBU
Spore coat protein CotS {ECO:0000313|EMBL:ETJ16437.1}; TaxID=408170 species="unclassified sequences; metagenomes; organismal metagenomes.;" source="human gut metagenome.;"
spore coat protein CotS
L3_105_000G1_scaffold_40_22
Clostridium butyricum, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

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22236..23099
DNA (864bp) protein (288aa)
yabG; sporulation-specific protease YabG (EC:3.4.-.-)
Sporulation peptidase YabG n=4 Tax=Clostridium butyricum RepID=B1R2G3_CLOBU
Peptidase {ECO:0000313|EMBL:KHD13681.1}; TaxID=1492 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium butyricum.;"
L3_105_000G1_scaffold_40_23
Clostridium sp. IBUN13A, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

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23388..23630
DNA (243bp) protein (81aa)
4-diphosphocytidyl-2-C-methyl-D-erythritol kinase {ECO:0000313|EMBL:KJZ85527.1}; EC=2.7.1.148 {ECO:0000313|EMBL:KJZ85527.1};; TaxID=1523156 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium sp. IBUN13A.;"
Protein veg n=4 Tax=Clostridium butyricum RepID=B1R2G4_CLOBU
hypothetical protein
L3_105_000G1_scaffold_40_24

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24121..25683
DNA (1563bp) protein (521aa)
Uncharacterized protein n=1 Tax=Clostridium butyricum 60E.3 RepID=R0AGK2_CLOBU
LysM protein {ECO:0000313|EMBL:ETJ16440.1}; TaxID=408170 species="unclassified sequences; metagenomes; organismal metagenomes.;" source="human gut metagenome.;"
putative glycosyl hydrolase
L3_105_000G1_scaffold_40_25
Clostridium sp. IBUN125C, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

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25792..26628
DNA (837bp) protein (279aa)
cyanophycinase (EC:3.-.-.-)
Cyanophycinase n=3 Tax=Clostridium butyricum RepID=B1R2G6_CLOBU
Uncharacterized protein {ECO:0000313|EMBL:KJZ84978.1}; TaxID=1523154 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium sp. IBUN125C.;"
L3_105_000G1_scaffold_40_26

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26631..29240
DNA (2610bp) protein (870aa)
cphA: cyanophycin synthetase (EC:6.3.2.29 6.3.2.30)
Cyanophycin synthetase n=1 Tax=Clostridium butyricum 60E.3 RepID=N9YUY6_CLOBU
Cyanophycin synthetase {ECO:0000313|EMBL:ETJ16442.1}; TaxID=408170 species="unclassified sequences; metagenomes; organismal metagenomes.;" source="human gut metagenome.;"
L3_105_000G1_scaffold_40_27

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29329..30171
DNA (843bp) protein (281aa)
4-diphosphocytidyl-2-C-methyl-D-erythritol kinase n=4 Tax=Clostridium butyricum RepID=B1R2G8_CLOBU
4-diphosphocytidyl-2-C-methyl-D-erythritol kinase {ECO:0000313|EMBL:ETJ16443.1}; TaxID=408170 species="unclassified sequences; metagenomes; organismal metagenomes.;" source="human gut metagenome.;"
ipk; 4-diphosphocytidyl-2-C-methyl-D-erythritol kinase
L3_105_000G1_scaffold_40_28
Clostridium butyricum, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

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30247..30930
DNA (684bp) protein (228aa)
Stage II sporulation protein R n=1 Tax=Clostridium butyricum 60E.3 RepID=R0A466_CLOBU
Stage II sporulation protein R {ECO:0000313|EMBL:ENZ31238.1}; TaxID=997898 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium butyricum 60E.3.;"
sporulation stage II, protein R
L3_105_000G1_scaffold_40_29

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30945..31934
DNA (990bp) protein (330aa)
tRNA methyl transferase n=3 Tax=Clostridium butyricum RepID=B1R2H0_CLOBU
tRNA methyl transferase {ECO:0000313|EMBL:ETJ16445.1}; TaxID=408170 species="unclassified sequences; metagenomes; organismal metagenomes.;" source="human gut metagenome.;"
tRNA(5-methylaminomethyl-2-thiouridylate) methyltransferase, contains the PP-loop ATPase domain
L3_105_000G1_scaffold_40_30

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31982..32392
DNA (411bp) protein (137aa)
Uncharacterized protein n=4 Tax=Clostridium butyricum RepID=B1R2H1_CLOBU
Uncharacterized protein {ECO:0000313|EMBL:ETJ16446.1}; TaxID=408170 species="unclassified sequences; metagenomes; organismal metagenomes.;" source="human gut metagenome.;"
hypothetical protein
Displaying items 1-30 of 170 in total

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