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L3_105_000G1_scaffold_62

Search features with annotation key words

Displaying items 1-30 of 137 in total
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
L3_105_000G1_scaffold_62_1
[Ruminococcus] gnavus, Blautia, Clostridiales, Clostridia, Firmicutes, Bacteria

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648..2138
DNA (1491bp) protein (497aa)
TIGR02677 family protein n=1 Tax=Ruminococcus gnavus ATCC 29149 RepID=A7B1U3_RUMGN
TIGR02677 family protein {ECO:0000313|EMBL:EDN78215.1}; TaxID=411470 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Blautia.;" source="Ruminococcus gnavus ATCC 29149.;"
conserved hypothetical protein TIGR02677
L3_105_000G1_scaffold_62_2
Lachnospiraceae bacterium 2_1_58FAA, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

2135..3280
DNA (1146bp) protein (382aa)
TIGR02678 family protein n=3 Tax=Lachnospiraceae RepID=A7B1U4_RUMGN
Uncharacterized protein {ECO:0000313|EMBL:EGN46562.1}; TaxID=658082 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae.;" source="Lachnospiraceae bacterium 2_1_58FAA.;"
conserved hypothetical protein TIGR02678
L3_105_000G1_scaffold_62_3
[Ruminococcus] gnavus, Blautia, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

3273..7364
DNA (4092bp) protein (1364aa)
TIGR02680 family protein n=1 Tax=Ruminococcus gnavus ATCC 29149 RepID=A7B1U5_RUMGN
TIGR02680 family protein {ECO:0000313|EMBL:EDN78217.1}; TaxID=411470 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Blautia.;" source="Ruminococcus gnavus ATCC 29149.;"
conserved hypothetical protein TIGR02680
L3_105_000G1_scaffold_62_4
[Ruminococcus] gnavus, Blautia, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

7361..8656
DNA (1296bp) protein (432aa)
TIGR02679 family protein n=2 Tax=Lachnospiraceae RepID=V8BY62_RUMGN
TIGR02679 family protein {ECO:0000313|EMBL:ETD19426.1}; TaxID=1073375 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Blautia.;" source="Ruminococcus gnavus CC55_001C.;"
hypothetical protein
L3_105_000G1_scaffold_62_5
[Ruminococcus] gnavus, Blautia, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

8683..9915
DNA (1233bp) protein (411aa)
Uncharacterized protein n=2 Tax=Clostridiales RepID=A7B1U7_RUMGN
Uncharacterized protein {ECO:0000313|EMBL:EDN78219.1}; TaxID=411470 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Blautia.;" source="Ruminococcus gnavus ATCC 29149.;"
hypothetical protein
L3_105_000G1_scaffold_62_6
[Ruminococcus] gnavus, Blautia, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

10010..10315
DNA (306bp) protein (102aa)
Uncharacterized protein n=1 Tax=Ruminococcus gnavus CAG:126 RepID=R5TY66_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:EDN78220.1}; TaxID=411470 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Blautia.;" source="Ruminococcus gnavus ATCC 29149.;"
hypothetical protein
L3_105_000G1_scaffold_62_7
[Ruminococcus] gnavus, Blautia, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

10551..12089
DNA (1539bp) protein (513aa)
Asparagine synthase (glutamine-hydrolyzing) (EC:6.3.5.4)
Asparagine synthetase n=1 Tax=Ruminococcus gnavus ATCC 29149 RepID=A7B1U9_RUMGN
Putative asparagine synthase (Glutamine-hydrolyzing) {ECO:0000313|EMBL:EDN78221.1}; TaxID=411470 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Blautia.;" source="Ruminococcus gnavus ATCC 29149.;"
L3_105_000G1_scaffold_62_8
Lachnospiraceae bacterium 2_1_58FAA, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(12143..13576)
DNA (1434bp) protein (478aa)
Uncharacterized protein n=2 Tax=Lachnospiraceae RepID=V8BX89_RUMGN
Uncharacterized protein {ECO:0000313|EMBL:EGN46556.1}; TaxID=658082 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae.;" source="Lachnospiraceae bacterium 2_1_58FAA.;"
pyridoxal-dependent decarboxylase
L3_105_000G1_scaffold_62_9
Lachnospiraceae bacterium 2_1_58FAA, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

13701..14615
DNA (915bp) protein (305aa)
LysR substrate binding domain protein n=3 Tax=Lachnospiraceae RepID=A7B1V1_RUMGN
Uncharacterized protein {ECO:0000313|EMBL:EGN46555.1}; TaxID=658082 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae.;" source="Lachnospiraceae bacterium 2_1_58FAA.;"
LysR family transcriptional regulator
L3_105_000G1_scaffold_62_10
Lachnospiraceae bacterium 2_1_58FAA, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(14618..15700)
DNA (1083bp) protein (361aa)
Dihydrodipicolinate reductase domain protein n=3 Tax=Lachnospiraceae RepID=A7B1V2_RUMGN
Uncharacterized protein {ECO:0000313|EMBL:EGN46554.1}; TaxID=658082 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae.;" source="Lachnospiraceae bacterium 2_1_58FAA.;"
hypothetical protein
L3_105_000G1_scaffold_62_11
[Ruminococcus] gnavus, Blautia, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

15931..17271
DNA (1341bp) protein (447aa)
Uncharacterized protein n=1 Tax=Ruminococcus gnavus ATCC 29149 RepID=A7B1V3_RUMGN
Uncharacterized protein {ECO:0000313|EMBL:EDN78225.1}; TaxID=411470 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Blautia.;" source="Ruminococcus gnavus ATCC 29149.;"
hypothetical protein
L3_105_000G1_scaffold_62_12
[Ruminococcus] gnavus, Blautia, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

17288..18244
DNA (957bp) protein (319aa)
Peptidase, U32 family n=3 Tax=Lachnospiraceae RepID=A7B1V4_RUMGN
Uncharacterized protein {ECO:0000313|EMBL:ETD19418.1}; TaxID=1073375 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Blautia.;" source="Ruminococcus gnavus CC55_001C.;"
Collagenase and related proteases
L3_105_000G1_scaffold_62_13
Lachnospiraceae bacterium 2_1_58FAA, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(18238..19053)
DNA (816bp) protein (272aa)
Uncharacterized protein n=3 Tax=Lachnospiraceae RepID=A7B1V5_RUMGN
Uncharacterized protein {ECO:0000313|EMBL:EGN46551.1}; TaxID=658082 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae.;" source="Lachnospiraceae bacterium 2_1_58FAA.;"
hypothetical protein
L3_105_000G1_scaffold_62_14
Lachnospiraceae bacterium 2_1_58FAA, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

19386..19811
DNA (426bp) protein (142aa)
Uncharacterized protein n=2 Tax=Lachnospiraceae RepID=V8BY51_RUMGN
Uncharacterized protein {ECO:0000313|EMBL:EGN46550.1}; TaxID=658082 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae.;" source="Lachnospiraceae bacterium 2_1_58FAA.;"
phosphotransferase system, mannose/fructose-specific component IIA
L3_105_000G1_scaffold_62_15
[Ruminococcus] gnavus, Blautia, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

20088..20573
DNA (486bp) protein (162aa)
Phosphotransferase system, mannose/fructose/N-acetylgalactosamine-specific component IIB (EC:2.7.1.69)
PTS system sorbose subfamily IIB component n=3 Tax=Lachnospiraceae RepID=A7B1V8_RUMGN
Uncharacterized protein {ECO:0000313|EMBL:ETD19415.1}; TaxID=1073375 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Blautia.;" source="Ruminococcus gnavus CC55_001C.;"
L3_105_000G1_scaffold_62_16
Lachnospiraceae bacterium 2_1_58FAA, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

20602..21399
DNA (798bp) protein (266aa)
PTS system sorbose-specific iic component n=3 Tax=Lachnospiraceae RepID=A7B1V9_RUMGN
Uncharacterized protein {ECO:0000313|EMBL:EGN46548.1}; TaxID=658082 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae.;" source="Lachnospiraceae bacterium 2_1_58FAA.;"
Phosphotransferase system, mannose/fructose/N-acetylgalactosamine-specific component IIC
L3_105_000G1_scaffold_62_17
[Ruminococcus] gnavus, Blautia, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

21396..22220
DNA (825bp) protein (275aa)
PTS system mannose/fructose/sorbose family IID component n=3 Tax=Lachnospiraceae RepID=A7B1W0_RUMGN
Uncharacterized protein {ECO:0000313|EMBL:ETD19413.1}; TaxID=1073375 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Blautia.;" source="Ruminococcus gnavus CC55_001C.;"
PTS system IID component, Man family (TC 4.A.6)
L3_105_000G1_scaffold_62_18
Lachnospiraceae bacterium 2_1_58FAA, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

22237..24411
DNA (2175bp) protein (725aa)
Uncharacterized protein n=3 Tax=Lachnospiraceae RepID=A7B1W1_RUMGN
Uncharacterized protein {ECO:0000313|EMBL:EGN46546.1}; TaxID=658082 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae.;" source="Lachnospiraceae bacterium 2_1_58FAA.;"
hypothetical protein
L3_105_000G1_scaffold_62_19
[Ruminococcus] gnavus, Blautia, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

24395..25513
DNA (1119bp) protein (373aa)
Uncharacterized protein n=3 Tax=Lachnospiraceae RepID=A7B1W2_RUMGN
Uncharacterized protein {ECO:0000313|EMBL:ETD19411.1}; TaxID=1073375 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Blautia.;" source="Ruminococcus gnavus CC55_001C.;"
Protein of unknown function (DUF2961).
L3_105_000G1_scaffold_62_20
[Ruminococcus] gnavus, Blautia, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

25937..26176
DNA (240bp) protein (80aa)
Uncharacterized protein n=1 Tax=Ruminococcus gnavus ATCC 29149 RepID=A7B1W4_RUMGN
Uncharacterized protein {ECO:0000313|EMBL:EDN78236.1}; TaxID=411470 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Blautia.;" source="Ruminococcus gnavus ATCC 29149.;"
L3_105_000G1_scaffold_62_21
Firmicutes bacterium CAG:424, Firmicutes, Bacteria

Not on your lists

comp(26340..26606)
DNA (267bp) protein (89aa)
Transposase IS4 family protein n=1 Tax=Firmicutes bacterium CAG:424 RepID=R6RJ02_9FIRM
Transposase IS4 family protein {ECO:0000313|EMBL:CDC47750.1}; TaxID=1263022 species="Bacteria; Firmicutes; environmental samples.;" source="Firmicutes bacterium CAG:424.;"
hypothetical protein
L3_105_000G1_scaffold_62_22
[Ruminococcus] gnavus, Blautia, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

26848..29508
DNA (2661bp) protein (887aa)
levR2; transcriptional regulatory protein LevR (EC:2.7.1.-)
Sigma-54 interaction domain protein n=2 Tax=Ruminococcus gnavus RepID=A7B1W7_RUMGN
Uncharacterized protein {ECO:0000313|EMBL:ETD19410.1}; TaxID=1073375 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Blautia.;" source="Ruminococcus gnavus CC55_001C.;"
L3_105_000G1_scaffold_62_23
Lachnospiraceae bacterium 2_1_58FAA, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

29524..30852
DNA (1329bp) protein (443aa)
RNA polymerase sigma-54 factor n=3 Tax=Lachnospiraceae RepID=A7B1W8_RUMGN
RNA polymerase sigma-54 factor {ECO:0000313|EMBL:EGN46543.1}; TaxID=658082 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae.;" source="Lachnospiraceae bacterium 2_1_58FAA.;"
RNA polymerase sigma-54 factor
L3_105_000G1_scaffold_62_24
Lachnospiraceae bacterium 2_1_58FAA, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

31263..31667
DNA (405bp) protein (135aa)
Uncharacterized protein n=3 Tax=Lachnospiraceae RepID=A7B1X0_RUMGN
Uncharacterized protein {ECO:0000313|EMBL:EGN46542.1}; TaxID=658082 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae.;" source="Lachnospiraceae bacterium 2_1_58FAA.;"
Transposase and inactivated derivatives
L3_105_000G1_scaffold_62_25
Lachnospiraceae bacterium 2_1_58FAA, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

31627..31824
DNA (198bp) protein (66aa)
Uncharacterized protein n=2 Tax=Lachnospiraceae RepID=V8BX74_RUMGN
Uncharacterized protein {ECO:0000313|EMBL:EGN46541.1}; TaxID=658082 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae.;" source="Lachnospiraceae bacterium 2_1_58FAA.;"
L3_105_000G1_scaffold_62_26
Lachnospiraceae bacterium 2_1_58FAA, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

31805..32194
DNA (390bp) protein (130aa)
Uncharacterized protein n=3 Tax=Lachnospiraceae RepID=V8BY40_RUMGN
Uncharacterized protein {ECO:0000313|EMBL:EGN46540.1}; TaxID=658082 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae.;" source="Lachnospiraceae bacterium 2_1_58FAA.;"
transposase TRm2011
L3_105_000G1_scaffold_62_27
[Ruminococcus] gnavus, Blautia, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

32544..33089
DNA (546bp) protein (182aa)
BioY family protein n=2 Tax=Clostridiales RepID=A7B1X3_RUMGN
BioY family protein {ECO:0000313|EMBL:EDN78245.1}; TaxID=411470 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Blautia.;" source="Ruminococcus gnavus ATCC 29149.;"
hypothetical protein
L3_105_000G1_scaffold_62_28
[Ruminococcus] gnavus, Blautia, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

33159..33590
DNA (432bp) protein (144aa)
Uncharacterized protein n=4 Tax=Clostridiales RepID=A7B1X4_RUMGN
Uncharacterized protein {ECO:0000313|EMBL:ETD19404.1}; TaxID=1073375 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Blautia.;" source="Ruminococcus gnavus CC55_001C.;"
hypothetical protein
L3_105_000G1_scaffold_62_29
Lachnospiraceae bacterium 2_1_58FAA, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

33711..34805
DNA (1095bp) protein (365aa)
DNA-binding helix-turn-helix protein n=3 Tax=Lachnospiraceae RepID=A7B1X5_RUMGN
Uncharacterized protein {ECO:0000313|EMBL:EGN46537.1}; TaxID=658082 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae.;" source="Lachnospiraceae bacterium 2_1_58FAA.;"
XRE family transcriptional regulator
L3_105_000G1_scaffold_62_30
[Ruminococcus] gnavus, Blautia, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(34856..35905)
DNA (1050bp) protein (350aa)
Uncharacterized protein n=1 Tax=Ruminococcus gnavus ATCC 29149 RepID=A7B1X6_RUMGN
Uncharacterized protein {ECO:0000313|EMBL:EDN78248.1}; TaxID=411470 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Blautia.;" source="Ruminococcus gnavus ATCC 29149.;"
hypothetical protein
Displaying items 1-30 of 137 in total

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