ggKbase home page

L3_105_000G1_scaffold_69

Search features with annotation key words

Displaying items 1-30 of 108 in total
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
L3_105_000G1_scaffold_69_1
Bacteroides stercoris CAG:120, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

56..1075
DNA (1020bp) protein (340aa)
Uncharacterized protein n=1 Tax=Bacteroides stercoris CAG:120 RepID=R6AZ17_9BACE
Uncharacterized protein {ECO:0000313|EMBL:CDA46397.1}; TaxID=1263053 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides; environmental samples.;" source="Bacteroides stercoris CAG:120.;"
putative lipopolysaccharide core biosynthesis protein
L3_105_000G1_scaffold_69_2
Bacteroides stercoris CAG:120, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

1085..2005
DNA (921bp) protein (307aa)
Glycosyltransferase, family 8 n=3 Tax=Bacteroides RepID=B0NSM6_BACSE
Glycosyltransferase family 8 {ECO:0000313|EMBL:CDA46398.1}; TaxID=1263053 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides; environmental samples.;" source="Bacteroides stercoris CAG:120.;"
putative lipopolysaccharide 1,2-glucosyltransferase/general stress protein
L3_105_000G1_scaffold_69_3
Bacteroides stercoris, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

2061..2966
DNA (906bp) protein (302aa)
Glycosyltransferase, group 2 family protein {ECO:0000313|EMBL:EDS14803.1}; EC=2.4.-.- {ECO:0000313|EMBL:EDS14803.1};; TaxID=449673 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides.;" source="Bacteroides stercoris ATCC 43183.;"
Glycosyltransferase, group 2 family protein n=2 Tax=Bacteroides stercoris RepID=B0NSM7_BACSE
glycosyl transferase
L3_105_000G1_scaffold_69_4
Bacteroides stercoris CAG:120, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(2974..4083)
DNA (1110bp) protein (370aa)
UDP-galactopyranose mutase n=1 Tax=Bacteroides stercoris CAG:120 RepID=R6A5W1_9BACE
UDP-galactopyranose mutase {ECO:0000313|EMBL:CDA46400.1}; TaxID=1263053 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides; environmental samples.;" source="Bacteroides stercoris CAG:120.;"
UDP-galactopyranose mutase
L3_105_000G1_scaffold_69_5
Bacteroides stercoris CAG:120, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

4314..6152
DNA (1839bp) protein (613aa)
ABC transporter, ATP-binding protein n=3 Tax=Bacteroides RepID=B0NSN0_BACSE
ABC transporter ATP-binding protein {ECO:0000313|EMBL:CDA46401.1}; TaxID=1263053 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides; environmental samples.;" source="Bacteroides stercoris CAG:120.;"
putative transport ATP-binding protein
L3_105_000G1_scaffold_69_6
Bacteroides stercoris CAG:120, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(6679..7323)
DNA (645bp) protein (215aa)
Predicted double-stranded RNA/RNA-DNA hybrid binding protein (EC:3.1.26.4)
Uncharacterized protein n=1 Tax=Bacteroides stercoris CAG:120 RepID=R6AZ20_9BACE
Uncharacterized protein {ECO:0000313|EMBL:CDA46402.1}; TaxID=1263053 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides; environmental samples.;" source="Bacteroides stercoris CAG:120.;"
L3_105_000G1_scaffold_69_7
Bacteroides stercoris, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

7501..8103
DNA (603bp) protein (201aa)
Uncharacterized protein n=2 Tax=Bacteroides RepID=B0NSN2_BACSE
Uncharacterized protein {ECO:0000313|EMBL:EDS14808.1}; TaxID=449673 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides.;" source="Bacteroides stercoris ATCC 43183.;"
nitroreductase
L3_105_000G1_scaffold_69_8
Bacteroides stercoris CAG:120, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

8161..8688
DNA (528bp) protein (176aa)
Shikimate kinase {ECO:0000256|HAMAP-Rule:MF_00109}; Short=SK {ECO:0000256|HAMAP-Rule:MF_00109};; EC=2.7.1.71 {ECO:0000256|HAMAP-Rule:MF_00109};; TaxID=1263053 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides; environmental samples.;" source="Bacteroides stercoris CAG:120.;"
shikimate kinase (EC:2.7.1.71)
Shikimate kinase n=1 Tax=Bacteroides stercoris CAG:120 RepID=R6AC30_9BACE
L3_105_000G1_scaffold_69_9
Bacteroides stercoris CAG:120, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

8800..10692
DNA (1893bp) protein (631aa)
Biosynthetic arginine decarboxylase {ECO:0000256|HAMAP-Rule:MF_01417}; Short=ADC {ECO:0000256|HAMAP-Rule:MF_01417};; EC=4.1.1.19 {ECO:0000256|HAMAP-Rule:MF_01417, ECO:0000256|SAAS:SAAS00212226};; TaxID=1263053 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides; environmental samples.;" source="Bacteroides stercoris CAG:120.;"
Biosynthetic arginine decarboxylase n=2 Tax=Bacteroides RepID=R6A5W6_9BACE
putative arginine decarboxylase
L3_105_000G1_scaffold_69_10
Bacteroides stercoris CAG:120, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

10692..11465
DNA (774bp) protein (258aa)
Acetylglutamate kinase {ECO:0000256|HAMAP-Rule:MF_00082}; EC=2.7.2.8 {ECO:0000256|HAMAP-Rule:MF_00082};; N-acetyl-L-glutamate 5-phosphotransferase {ECO:0000256|HAMAP-Rule:MF_00082}; NAG kinase {ECO:0000256|HAMAP-Rule:MF_00082}; TaxID=1263053 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides; environmental samples.;" source="Bacteroides stercoris CAG:120.;"
N-acetylglutamate kinase (EC:2.7.2.8)
Acetylglutamate kinase n=1 Tax=Bacteroides stercoris CAG:120 RepID=R6AIN9_9BACE
L3_105_000G1_scaffold_69_11
Bacteroides stercoris, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

11527..12036
DNA (510bp) protein (170aa)
Sigma-70 region 2 n=3 Tax=Bacteroides RepID=B0NSN6_BACSE
RNA polymerase sigma-70 factor, ECF subfamily {ECO:0000313|EMBL:EPH21582.1}; TaxID=1073351 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides.;" source="Bacteroides stercoris CC31F.;"
RNA polymerase, sigma-24 subunit, ECF subfamily
L3_105_000G1_scaffold_69_12
Bacteroides stercoris CAG:120, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

12026..12508
DNA (483bp) protein (161aa)
Uncharacterized protein n=2 Tax=Bacteroides RepID=B0NSN7_BACSE
Uncharacterized protein {ECO:0000313|EMBL:CDA46408.1}; TaxID=1263053 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides; environmental samples.;" source="Bacteroides stercoris CAG:120.;"
hypothetical protein
L3_105_000G1_scaffold_69_13
Bacteroides stercoris, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(12723..13574)
DNA (852bp) protein (284aa)
Uncharacterized protein n=1 Tax=Bacteroides stercoris CC31F RepID=S3YEZ0_BACSE
Uncharacterized protein {ECO:0000313|EMBL:EPH21584.1}; TaxID=1073351 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides.;" source="Bacteroides stercoris CC31F.;"
lipoprotein
L3_105_000G1_scaffold_69_14
Bacteroides stercoris CAG:120, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

13840..14544
DNA (705bp) protein (235aa)
Uncharacterized protein n=1 Tax=Bacteroides stercoris CAG:120 RepID=R6A5X0_9BACE
Uncharacterized protein {ECO:0000313|EMBL:CDA46410.1}; TaxID=1263053 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides; environmental samples.;" source="Bacteroides stercoris CAG:120.;"
hypothetical protein
L3_105_000G1_scaffold_69_15
Bacteroides stercoris CAG:120, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(14582..14977)
DNA (396bp) protein (132aa)
Uncharacterized protein n=3 Tax=Bacteroides RepID=B0NSP0_BACSE
Uncharacterized protein {ECO:0000313|EMBL:CDA46411.1}; TaxID=1263053 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides; environmental samples.;" source="Bacteroides stercoris CAG:120.;"
hypothetical protein
L3_105_000G1_scaffold_69_16
Bacteroides stercoris, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

15174..15641
DNA (468bp) protein (156aa)
Ribosome maturation factor RimP n=3 Tax=Bacteroides RepID=B0NSP1_BACSE
Ribosome maturation factor RimP {ECO:0000256|HAMAP-Rule:MF_01077}; TaxID=449673 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides.;" source="Bacteroides stercoris ATCC 43183.;"
hypothetical protein
L3_105_000G1_scaffold_69_17
Bacteroides stercoris, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

15646..16911
DNA (1266bp) protein (422aa)
Transcription termination factor NusA n=2 Tax=Bacteroides stercoris RepID=B0NSP2_BACSE
Transcription termination/antitermination protein NusA {ECO:0000256|HAMAP-Rule:MF_00945}; TaxID=1073351 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides.;" source="Bacteroides stercoris CC31F.;"
NusA antitermination factor
L3_105_000G1_scaffold_69_18
Bacteroides stercoris, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

17046..20003
DNA (2958bp) protein (986aa)
Translation initiation factor IF-2 n=1 Tax=Bacteroides stercoris ATCC 43183 RepID=B0NSP3_BACSE
Translation initiation factor IF-2 {ECO:0000256|HAMAP-Rule:MF_00100, ECO:0000256|RuleBase:RU000644}; TaxID=449673 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides.;" source="Bacteroides stercoris ATCC 43183.;"
bacterial translation initiation factor 2 (bIF-2)
L3_105_000G1_scaffold_69_19
Bacteroides stercoris, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

20103..20615
DNA (513bp) protein (171aa)
CvpA family protein n=1 Tax=Bacteroides stercoris ATCC 43183 RepID=B0NSP4_BACSE
CvpA family protein {ECO:0000313|EMBL:EDS14820.1}; TaxID=449673 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides.;" source="Bacteroides stercoris ATCC 43183.;"
hypothetical protein
L3_105_000G1_scaffold_69_20
Bacteroides stercoris, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

20649..22103
DNA (1455bp) protein (485aa)
FeS assembly protein SufB n=3 Tax=Bacteroides RepID=B0NSP5_BACSE
Fe-S cluster assembly protein SufB {ECO:0000313|EMBL:EPH21591.1}; TaxID=1073351 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides.;" source="Bacteroides stercoris CC31F.;"
ABC transporter permease
L3_105_000G1_scaffold_69_21
Bacteroides stercoris, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

22136..22891
DNA (756bp) protein (252aa)
FeS assembly ATPase SufC n=2 Tax=Bacteroides stercoris RepID=B0NSP6_BACSE
FeS assembly ATPase SufC {ECO:0000313|EMBL:EDS14822.1}; TaxID=449673 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides.;" source="Bacteroides stercoris ATCC 43183.;"
FeS assembly ATPase SufC
L3_105_000G1_scaffold_69_22
Bacteroides stercoris, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

22980..24323
DNA (1344bp) protein (448aa)
FeS assembly protein SufD n=1 Tax=Bacteroides stercoris CC31F RepID=S3YVI0_BACSE
FeS assembly protein SufD {ECO:0000313|EMBL:EPH21593.1}; TaxID=1073351 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides.;" source="Bacteroides stercoris CC31F.;"
ABC transporter permease
L3_105_000G1_scaffold_69_23
Bacteroides stercoris CAG:120, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

24408..25619
DNA (1212bp) protein (404aa)
Cysteine desulfurase {ECO:0000256|SAAS:SAAS00062216}; EC=2.8.1.7 {ECO:0000256|SAAS:SAAS00062216};; TaxID=1263053 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides; environmental samples.;" source="Bacteroides stercoris CAG:120.;"
cysteine desulfurase (EC:2.8.1.7 4.4.1.16)
Cysteine desulfurase SufS subfamily n=1 Tax=Bacteroides stercoris CAG:120 RepID=R6AC47_9BACE
L3_105_000G1_scaffold_69_24
Bacteroides stercoris, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

25725..26045
DNA (321bp) protein (107aa)
UPF0145 protein BACSTE_02513 n=3 Tax=Bacteroides RepID=B0NSP9_BACSE
UPF0145 protein BACSTE_02513 {ECO:0000256|HAMAP-Rule:MF_00338}; TaxID=449673 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides.;" source="Bacteroides stercoris ATCC 43183.;"
hypothetical protein
L3_105_000G1_scaffold_69_25
Bacteroides stercoris CAG:120, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

26300..28501
DNA (2202bp) protein (734aa)
Putative K(+)-stimulated pyrophosphate-energized sodium pump {ECO:0000256|HAMAP-Rule:MF_01129}; EC=3.6.1.1 {ECO:0000256|HAMAP-Rule:MF_01129};; Membrane-bound sodium-translocating pyrophosphatase {ECO:0000256|HAMAP-Rule:MF_01129}; Pyrophosphate-energized inorganic pyrophosphatase {ECO:0000256|HAMAP-Rule:MF_01129}; TaxID=1263053 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides; environmental samples.;" source="Bacteroides stercoris CAG:120.;"
V-type H(+)-translocating pyrophosphatase (EC:3.6.1.1)
Putative K(+)-stimulated pyrophosphate-energized sodium pump n=1 Tax=Bacteroides stercoris CAG:120 RepID=R6AIQ2_9BACE
L3_105_000G1_scaffold_69_26
Bacteroides stercoris, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(28675..29280)
DNA (606bp) protein (202aa)
Uncharacterized protein n=2 Tax=Bacteroides stercoris RepID=B0NSQ1_BACSE
Uncharacterized protein {ECO:0000313|EMBL:EDS14827.1}; TaxID=449673 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides.;" source="Bacteroides stercoris ATCC 43183.;"
hypothetical protein
L3_105_000G1_scaffold_69_27
Bacteroides stercoris, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(29277..29555)
DNA (279bp) protein (93aa)
Uncharacterized protein n=3 Tax=Bacteroides RepID=B0NSQ2_BACSE
Uncharacterized protein {ECO:0000313|EMBL:EDS14828.1}; TaxID=449673 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides.;" source="Bacteroides stercoris ATCC 43183.;"
hypothetical protein
L3_105_000G1_scaffold_69_28
Bacteroides stercoris CAG:120, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

29663..30268
DNA (606bp) protein (202aa)
Ribonuclease HII {ECO:0000256|HAMAP-Rule:MF_00052, ECO:0000256|SAAS:SAAS00016879}; Short=RNase HII {ECO:0000256|HAMAP-Rule:MF_00052};; EC=3.1.26.4 {ECO:0000256|HAMAP-Rule:MF_00052, ECO:0000256|SAAS:SAAS00016872};; TaxID=1263053 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides; environmental samples.;" source="Bacteroides stercoris CAG:120.;"
RNase HII (EC:3.1.26.4)
Ribonuclease HII n=3 Tax=Bacteroides RepID=B0NSQ3_BACSE
L3_105_000G1_scaffold_69_29
Bacteroides stercoris CAG:120, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(30263..30634)
DNA (372bp) protein (124aa)
DNA-binding helix-turn-helix protein n=2 Tax=Bacteroides RepID=R6A5Y6_9BACE
DNA-binding helix-turn-helix protein {ECO:0000313|EMBL:CDA46425.1}; TaxID=1263053 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides; environmental samples.;" source="Bacteroides stercoris CAG:120.;"
Helix-turn-helix.
L3_105_000G1_scaffold_69_30
Bacteroides stercoris CAG:120, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

30937..31635
DNA (699bp) protein (233aa)
Uncharacterized protein n=1 Tax=Bacteroides stercoris CAG:120 RepID=R6AIQ7_9BACE
Uncharacterized protein {ECO:0000313|EMBL:CDA46426.1}; TaxID=1263053 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides; environmental samples.;" source="Bacteroides stercoris CAG:120.;"
Displaying items 1-30 of 108 in total

View Taxonomy