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L3_105_000G1_scaffold_88

Search features with annotation key words

Displaying items 1-30 of 121 in total
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
L3_105_000G1_scaffold_88_1
Lactobacillus rhamnosus, Lactobacillus, Lactobacillales, Bacilli, Firmicutes, Bacteria

Not on your lists

451..2838
DNA (2388bp) protein (796aa)
Beta-glucosidase (GH3) n=6 Tax=Lactobacillus rhamnosus RepID=C7TH12_LACRL
bglX; beta-glucosidase
Beta-glucosidase {ECO:0000313|EMBL:AGP73355.1}; TaxID=1318634 species="Bacteria; Firmicutes; Bacilli; Lactobacillales; Lactobacillaceae; Lactobacillus.;" source="Lactobacillus rhamnosus LOCK908.;"
L3_105_000G1_scaffold_88_2
Lactobacillus rhamnosus, Lactobacillus, Lactobacillales, Bacilli, Firmicutes, Bacteria

Not on your lists

3589..4545
DNA (957bp) protein (319aa)
ABC transporter, substrate-binding protein n=5 Tax=Lactobacillus rhamnosus RepID=C7TH15_LACRL
ATU2672; ABC transporter substrate-binding protein
ABC-type uncharacterized transport system, periplasmic component {ECO:0000313|EMBL:AGP73358.1}; TaxID=1318634 species="Bacteria; Firmicutes; Bacilli; Lactobacillales; Lactobacillaceae; Lactobacillus.;" source="Lactobacillus rhamnosus LOCK908.;"
L3_105_000G1_scaffold_88_3
Lactobacillus rhamnosus, Lactobacillus, Lactobacillales, Bacilli, Firmicutes, Bacteria

Not on your lists

5133..6098
DNA (966bp) protein (322aa)
ABC transporter substrate binding family protein n=7 Tax=Lactobacillus rhamnosus RepID=G7UX03_LACRH
ABC transporter substrate binding family protein
ABC transporter substrate-binding protein {ECO:0000313|EMBL:EKS54116.1}; TaxID=1203258 species="Bacteria; Firmicutes; Bacilli; Lactobacillales; Lactobacillaceae; Lactobacillus.;" source="Lactobacillus rhamnosus LRHMDP2.;"
L3_105_000G1_scaffold_88_4
Lactobacillus rhamnosus, Lactobacillus, Lactobacillales, Bacilli, Firmicutes, Bacteria

Not on your lists

6127..7098
DNA (972bp) protein (324aa)
ABC transporter permease n=9 Tax=Lactobacillus rhamnosus RepID=C7TAE2_LACRG
branched-chain amino acid transport system / permease component family protein
ABC transporter permease protein {ECO:0000313|EMBL:AGP73361.1}; TaxID=1318634 species="Bacteria; Firmicutes; Bacilli; Lactobacillales; Lactobacillaceae; Lactobacillus.;" source="Lactobacillus rhamnosus LOCK908.;"
L3_105_000G1_scaffold_88_5
Lactobacillus rhamnosus, Lactobacillus, Lactobacillales, Bacilli, Firmicutes, Bacteria

Not on your lists

7100..7903
DNA (804bp) protein (268aa)
ABC-type uncharacterized transport system, ATPase component n=9 Tax=Lactobacillus rhamnosus RepID=B5QJC3_LACRH
ABC transporter family protein
Methionine ABC transporter ATP-binding protein {ECO:0000313|EMBL:AGP73362.1}; TaxID=1318634 species="Bacteria; Firmicutes; Bacilli; Lactobacillales; Lactobacillaceae; Lactobacillus.;" source="Lactobacillus rhamnosus LOCK908.;"
L3_105_000G1_scaffold_88_6
Lactobacillus rhamnosus, Lactobacillus, Lactobacillales, Bacilli, Firmicutes, Bacteria

Not on your lists

comp(7994..9037)
DNA (1044bp) protein (348aa)
Zinc-binding alcohol dehydrogenase n=5 Tax=Lactobacillus rhamnosus RepID=C7TH19_LACRL
Alcohol dehydrogenase
Alcohol dehydrogenase {ECO:0000313|EMBL:AGP73363.1}; TaxID=1318634 species="Bacteria; Firmicutes; Bacilli; Lactobacillales; Lactobacillaceae; Lactobacillus.;" source="Lactobacillus rhamnosus LOCK908.;"
L3_105_000G1_scaffold_88_7
Lactobacillus rhamnosus, Lactobacillus, Lactobacillales, Bacilli, Firmicutes, Bacteria

Not on your lists

comp(9096..11762)
DNA (2667bp) protein (889aa)
Putative calcium-translocating P-type ATPase, PMCA-type {ECO:0000313|EMBL:EEN78890.1}; EC=3.6.3.8 {ECO:0000313|EMBL:EEN78890.1};; TaxID=525361 species="Bacteria; Firmicutes; Bacilli; Lactobacillales; Lactobacillaceae; Lactobacillus.;" source="Lactobacillus rhamnosus LMS2-1.;"
Cation-transporting ATPase n=5 Tax=Lactobacillus rhamnosus RepID=S5A1L1_LACRH
Cation-transporting ATPase
L3_105_000G1_scaffold_88_8
Lactobacillus rhamnosus, Lactobacillus, Lactobacillales, Bacilli, Firmicutes, Bacteria

Not on your lists

comp(12224..13201)
DNA (978bp) protein (326aa)
Glycosyl transferase, group 2 n=6 Tax=Lactobacillus rhamnosus RepID=C7TAE7_LACRG
glycosyl transferase 2 family protein
Glycosyltransferase {ECO:0000313|EMBL:AGP73366.1}; TaxID=1318634 species="Bacteria; Firmicutes; Bacilli; Lactobacillales; Lactobacillaceae; Lactobacillus.;" source="Lactobacillus rhamnosus LOCK908.;"
L3_105_000G1_scaffold_88_9
Lactobacillus rhamnosus, Lactobacillus, Lactobacillales, Bacilli, Firmicutes, Bacteria

Not on your lists

comp(13232..15430)
DNA (2199bp) protein (733aa)
4-amino-4-deoxy-L-arabinose transferase related glycosyltransferase of PMT family protein n=5 Tax=Lactobacillus rhamnosus RepID=C7TH23_LACRL
hypothetical protein
4-amino-4-deoxy-L-arabinose transferase {ECO:0000313|EMBL:KIC98876.1}; TaxID=47715 species="Bacteria; Firmicutes; Bacilli; Lactobacillales; Lactobacillaceae; Lactobacillus.;" source="Lactobacillus rhamnosus.;"
L3_105_000G1_scaffold_88_10
Lactobacillus rhamnosus, Lactobacillus, Lactobacillales, Bacilli, Firmicutes, Bacteria

Not on your lists

comp(15417..15824)
DNA (408bp) protein (136aa)
Conserved membrane protein, GtcA family n=7 Tax=Lactobacillus rhamnosus RepID=C7TAE9_LACRG
gtrA-like family protein
Conserved membrane protein, GtcA family {ECO:0000313|EMBL:AGP73368.1}; TaxID=1318634 species="Bacteria; Firmicutes; Bacilli; Lactobacillales; Lactobacillaceae; Lactobacillus.;" source="Lactobacillus rhamnosus LOCK908.;"
L3_105_000G1_scaffold_88_11
Lactobacillus rhamnosus, Lactobacillus, Lactobacillales, Bacilli, Firmicutes, Bacteria

Not on your lists

16323..16547
DNA (225bp) protein (75aa)
Conserved protein n=3 Tax=Lactobacillus rhamnosus RepID=C7TH26_LACRL
ATP-dependent nuclease, subunit B
ATP-dependent nuclease, subunit B {ECO:0000313|EMBL:AGP73370.1}; TaxID=1318634 species="Bacteria; Firmicutes; Bacilli; Lactobacillales; Lactobacillaceae; Lactobacillus.;" source="Lactobacillus rhamnosus LOCK908.;"
L3_105_000G1_scaffold_88_12
Lactobacillus rhamnosus, Lactobacillus, Lactobacillales, Bacilli, Firmicutes, Bacteria

Not on your lists

16544..17239
DNA (696bp) protein (232aa)
Two-component response regulator n=4 Tax=Lactobacillus rhamnosus RepID=C7TH27_LACRL
transcriptional regulatory, C terminal family protein
Two component system response regulator CiaR {ECO:0000313|EMBL:AGP73371.1}; TaxID=1318634 species="Bacteria; Firmicutes; Bacilli; Lactobacillales; Lactobacillaceae; Lactobacillus.;" source="Lactobacillus rhamnosus LOCK908.;"
L3_105_000G1_scaffold_88_13
Lactobacillus rhamnosus, Lactobacillus, Lactobacillales, Bacilli, Firmicutes, Bacteria

Not on your lists

17236..18528
DNA (1293bp) protein (431aa)
Histidine kinase {ECO:0000256|SAAS:SAAS00251121}; EC=2.7.13.3 {ECO:0000256|SAAS:SAAS00251121};; TaxID=47715 species="Bacteria; Firmicutes; Bacilli; Lactobacillales; Lactobacillaceae; Lactobacillus.;" source="Lactobacillus rhamnosus.;"
Signal transduction histidine kinase n=11 Tax=Lactobacillus rhamnosus RepID=B5QJB6_LACRH
histidine kinase-, DNA gyrase B-, and HSP90-like ATPase family protein
L3_105_000G1_scaffold_88_14
Lactobacillus rhamnosus, Lactobacillus, Lactobacillales, Bacilli, Firmicutes, Bacteria

Not on your lists

comp(18671..19051)
DNA (381bp) protein (127aa)
Conserved protein n=11 Tax=Lactobacillus rhamnosus RepID=C7TAF4_LACRG
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:EKS54127.1}; TaxID=1203258 species="Bacteria; Firmicutes; Bacilli; Lactobacillales; Lactobacillaceae; Lactobacillus.;" source="Lactobacillus rhamnosus LRHMDP2.;"
L3_105_000G1_scaffold_88_15
Lactobacillus rhamnosus, Lactobacillus, Lactobacillales, Bacilli, Firmicutes, Bacteria

Not on your lists

19333..19992
DNA (660bp) protein (220aa)
Nitroreductase n=5 Tax=Lactobacillus rhamnosus RepID=C7TH30_LACRL
ydgI; nitroreductase
NAD(P)H-dependent quinone reductase {ECO:0000313|EMBL:KIC97405.1}; TaxID=47715 species="Bacteria; Firmicutes; Bacilli; Lactobacillales; Lactobacillaceae; Lactobacillus.;" source="Lactobacillus rhamnosus.;"
L3_105_000G1_scaffold_88_16
Lactobacillus rhamnosus, Lactobacillus, Lactobacillales, Bacilli, Firmicutes, Bacteria

Not on your lists

20032..21138
DNA (1107bp) protein (369aa)
L-Lactate dehydrogenase n=4 Tax=Lactobacillus rhamnosus RepID=C7TH31_LACRL
lctO; L-Lactate dehydrogenase
Lactate oxidase {ECO:0000313|EMBL:KIC97406.1}; TaxID=47715 species="Bacteria; Firmicutes; Bacilli; Lactobacillales; Lactobacillaceae; Lactobacillus.;" source="Lactobacillus rhamnosus.;"
L3_105_000G1_scaffold_88_17
Lactobacillus rhamnosus, Lactobacillus, Lactobacillales, Bacilli, Firmicutes, Bacteria

Not on your lists

comp(21411..24278)
DNA (2868bp) protein (956aa)
Uncharacterized protein n=1 Tax=Lactobacillus rhamnosus LOCK908 RepID=S4ZZY2_LACRH
Uncharacterized protein {ECO:0000313|EMBL:AGP73376.1}; TaxID=1318634 species="Bacteria; Firmicutes; Bacilli; Lactobacillales; Lactobacillaceae; Lactobacillus.;" source="Lactobacillus rhamnosus LOCK908.;"
Hypothetical protein
L3_105_000G1_scaffold_88_18
Lactobacillus rhamnosus, Lactobacillus, Lactobacillales, Bacilli, Firmicutes, Bacteria

Not on your lists

24706..26541
DNA (1836bp) protein (612aa)
hypothetical protein n=2 Tax=Lactobacillus rhamnosus RepID=UPI00037A0241
Transcriptional activator, Rgg/GadR/MutR family domain protein {ECO:0000313|EMBL:EEN78874.1}; TaxID=525361 species="Bacteria; Firmicutes; Bacilli; Lactobacillales; Lactobacillaceae; Lactobacillus.;" source="Lactobacillus rhamnosus LMS2-1.;"
Hypothetical protein
L3_105_000G1_scaffold_88_19
Lactobacillus rhamnosus, Lactobacillus, Lactobacillales, Bacilli, Firmicutes, Bacteria

Not on your lists

comp(27404..29224)
DNA (1821bp) protein (607aa)
Transcriptional regulator n=3 Tax=Lactobacillus rhamnosus RepID=C7TH54_LACRL
Hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:AGP73378.1}; TaxID=1318634 species="Bacteria; Firmicutes; Bacilli; Lactobacillales; Lactobacillaceae; Lactobacillus.;" source="Lactobacillus rhamnosus LOCK908.;"
L3_105_000G1_scaffold_88_20
Lactobacillus rhamnosus, Lactobacillus, Lactobacillales, Bacilli, Firmicutes, Bacteria

Not on your lists

comp(29832..30839)
DNA (1008bp) protein (336aa)
Conserved protein n=2 Tax=Lactobacillus rhamnosus RepID=C7TH55_LACRL
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:AGP73379.1}; TaxID=1318634 species="Bacteria; Firmicutes; Bacilli; Lactobacillales; Lactobacillaceae; Lactobacillus.;" source="Lactobacillus rhamnosus LOCK908.;"
L3_105_000G1_scaffold_88_21
Lactobacillus rhamnosus, Lactobacillus, Lactobacillales, Bacilli, Firmicutes, Bacteria

Not on your lists

comp(30859..31197)
DNA (339bp) protein (113aa)
Predicted transcriptional regulator n=11 Tax=Lactobacillus rhamnosus RepID=B5QJB0_LACRH
PadR family transcriptional regulator
Transcriptional regulator, PadR family {ECO:0000313|EMBL:EKS54131.1}; TaxID=1203258 species="Bacteria; Firmicutes; Bacilli; Lactobacillales; Lactobacillaceae; Lactobacillus.;" source="Lactobacillus rhamnosus LRHMDP2.;"
L3_105_000G1_scaffold_88_22
Lactobacillus rhamnosus, Lactobacillus, Lactobacillales, Bacilli, Firmicutes, Bacteria

Not on your lists

comp(31367..31672)
DNA (306bp) protein (102aa)
Small conserved membrane protein n=9 Tax=Lactobacillus rhamnosus RepID=B5QJA9_LACRH
mtN3/saliva family protein
Membrane protein {ECO:0000313|EMBL:KIC97411.1}; TaxID=47715 species="Bacteria; Firmicutes; Bacilli; Lactobacillales; Lactobacillaceae; Lactobacillus.;" source="Lactobacillus rhamnosus.;"
L3_105_000G1_scaffold_88_23
Lactobacillus rhamnosus, Lactobacillus, Lactobacillales, Bacilli, Firmicutes, Bacteria

Not on your lists

31829..32128
DNA (300bp) protein (100aa)
Conserved protein n=5 Tax=Lactobacillus rhamnosus RepID=C7TH58_LACRL
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:AGP73382.1}; TaxID=1318634 species="Bacteria; Firmicutes; Bacilli; Lactobacillales; Lactobacillaceae; Lactobacillus.;" source="Lactobacillus rhamnosus LOCK908.;"
L3_105_000G1_scaffold_88_24
Lactobacillus rhamnosus, Lactobacillus, Lactobacillales, Bacilli, Firmicutes, Bacteria

Not on your lists

comp(32161..33186)
DNA (1026bp) protein (342aa)
Alcohol dehydrogenase n=5 Tax=Lactobacillus rhamnosus RepID=C7TH59_LACRL
gor; alcohol dehydrogenase
Alcohol dehydrogenase {ECO:0000313|EMBL:AGP73383.1}; TaxID=1318634 species="Bacteria; Firmicutes; Bacilli; Lactobacillales; Lactobacillaceae; Lactobacillus.;" source="Lactobacillus rhamnosus LOCK908.;"
L3_105_000G1_scaffold_88_25
Lactobacillus rhamnosus, Lactobacillus, Lactobacillales, Bacilli, Firmicutes, Bacteria

Not on your lists

33397..33759
DNA (363bp) protein (121aa)
Conserved protein n=4 Tax=Lactobacillus rhamnosus RepID=C7TAG5_LACRG
hypothetical protein
Membrane protein {ECO:0000313|EMBL:KIC97414.1}; TaxID=47715 species="Bacteria; Firmicutes; Bacilli; Lactobacillales; Lactobacillaceae; Lactobacillus.;" source="Lactobacillus rhamnosus.;"
L3_105_000G1_scaffold_88_26
Lactobacillus rhamnosus, Lactobacillus, Lactobacillales, Bacilli, Firmicutes, Bacteria

Not on your lists

comp(33833..34312)
DNA (480bp) protein (160aa)
Conserved protein n=13 Tax=Lactobacillus rhamnosus RepID=C7TAG6_LACRG
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:EKS54136.1}; TaxID=1203258 species="Bacteria; Firmicutes; Bacilli; Lactobacillales; Lactobacillaceae; Lactobacillus.;" source="Lactobacillus rhamnosus LRHMDP2.;"
L3_105_000G1_scaffold_88_27
Lactobacillus rhamnosus, Lactobacillus, Lactobacillales, Bacilli, Firmicutes, Bacteria

Not on your lists

comp(34305..35471)
DNA (1167bp) protein (389aa)
Predicted permease n=12 Tax=Lactobacillus rhamnosus RepID=B5QJD2_LACRH
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:AGP73386.1}; TaxID=1318634 species="Bacteria; Firmicutes; Bacilli; Lactobacillales; Lactobacillaceae; Lactobacillus.;" source="Lactobacillus rhamnosus LOCK908.;"
L3_105_000G1_scaffold_88_28
Lactobacillus rhamnosus, Lactobacillus, Lactobacillales, Bacilli, Firmicutes, Bacteria

Not on your lists

35917..36111
DNA (195bp) protein (65aa)
Conserved protein n=9 Tax=Lactobacillus rhamnosus RepID=C7TAG8_LACRG
hypothetical protein
Conserved protein {ECO:0000313|EMBL:CAR86611.1}; Uncharacterized protein {ECO:0000313|EMBL:BAI41220.1}; TaxID=568703 species="Bacteria; Firmicutes; Bacilli; Lactobacillales; Lactobacillaceae; Lactobacillus.;" source="Lactobacillus rhamnosus (strain ATCC 53103 / GG).;"
L3_105_000G1_scaffold_88_29
Lactobacillus rhamnosus, Lactobacillus, Lactobacillales, Bacilli, Firmicutes, Bacteria

Not on your lists

36506..37132
DNA (627bp) protein (209aa)
LexA repressor {ECO:0000256|HAMAP-Rule:MF_00015, ECO:0000256|SAAS:SAAS00008101}; EC=3.4.21.88 {ECO:0000256|HAMAP-Rule:MF_00015, ECO:0000256|SAAS:SAAS00008054};; TaxID=1318634 species="Bacteria; Firmicutes; Bacilli; Lactobacillales; Lactobacillaceae; Lactobacillus.;" source="Lactobacillus rhamnosus LOCK908.;"
LexA repressor n=5 Tax=Lactobacillus rhamnosus RepID=C7TH65_LACRL
lexA; repressor LexA
L3_105_000G1_scaffold_88_30
Lactobacillus rhamnosus, Lactobacillus, Lactobacillales, Bacilli, Firmicutes, Bacteria

Not on your lists

comp(37253..37726)
DNA (474bp) protein (158aa)
Uncharacterized protein n=1 Tax=Lactobacillus rhamnosus LOCK908 RepID=S5A3G9_LACRH
Hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:AGP73390.1}; TaxID=1318634 species="Bacteria; Firmicutes; Bacilli; Lactobacillales; Lactobacillaceae; Lactobacillus.;" source="Lactobacillus rhamnosus LOCK908.;"
Displaying items 1-30 of 121 in total

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