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L3_105_000G1_scaffold_103

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Displaying items 1-30 of 122 in total
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
L3_105_000G1_scaffold_103_1
Erysipelotrichaceae bacterium CAG:64, Erysipelotrichales, Erysipelotrichia, Firmicutes, Bacteria

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182..1156
DNA (975bp) protein (325aa)
Uncharacterized protein n=4 Tax=Firmicutes RepID=E4LUV9_9CLOT
Uncharacterized protein {ECO:0000313|EMBL:CDC87257.1}; TaxID=1262981 species="Bacteria; Firmicutes; Erysipelotrichia; Erysipelotrichales; Erysipelotrichaceae; environmental samples.;" source="Erysipelotrichaceae bacterium CAG:64.;"
diguanylate kinase signaling protein
L3_105_000G1_scaffold_103_2
Erysipelotrichaceae bacterium 6_1_45, Erysipelotrichales, Erysipelotrichia, Firmicutes, Bacteria

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1200..2546
DNA (1347bp) protein (449aa)
Diguanylate cyclase (GGDEF) domain-containing protein n=1 Tax=Erysipelotrichaceae bacterium 6_1_45 RepID=H1BGP1_9FIRM
Diguanylate cyclase (GGDEF) domain-containing protein {ECO:0000313|EMBL:EHO20395.1}; TaxID=469614 species="Bacteria; Firmicutes; Erysipelotrichia; Erysipelotrichales; Erysipelotrichaceae.;" source="Erysipelotrichaceae bacterium 6_1_45.;"
diguanylate kinase signaling protein
L3_105_000G1_scaffold_103_3
Clostridium sp. HGF2, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

2670..4070
DNA (1401bp) protein (467aa)
Peptidase, S41 family n=5 Tax=Firmicutes RepID=E4LUV6_9CLOT
Peptidase, S41 family {ECO:0000313|EMBL:EFR37440.1}; TaxID=908340 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium sp. HGF2.;"
L3_105_000G1_scaffold_103_4
Peptoclostridium difficile, Peptoclostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

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comp(4285..5604)
DNA (1320bp) protein (440aa)
Uncharacterized protein n=5 Tax=Firmicutes RepID=E4LUV5_9CLOT
ATPase associated with various cellular activities family protein {ECO:0000313|EMBL:EQJ56955.1}; TaxID=1151410 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Peptostreptococcaceae; Peptoclostridium.;" source="Peptoclostridium difficile P28.;"
Predicted ATPase (AAA+ superfamily)
L3_105_000G1_scaffold_103_5
Peptoclostridium difficile, Peptoclostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

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6001..7203
DNA (1203bp) protein (401aa)
Threonine ammonia-lyase {ECO:0000313|EMBL:EQJ56956.1}; EC=4.3.1.19 {ECO:0000313|EMBL:EQJ56956.1};; TaxID=1151410 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Peptostreptococcaceae; Peptoclostridium.;" source="Peptoclostridium difficile P28.;"
threonine dehydratase (EC:4.3.1.19)
Threonine ammonia-lyase n=4 Tax=Firmicutes RepID=E4LUV4_9CLOT
L3_105_000G1_scaffold_103_6
[Clostridium] innocuum, Erysipelatoclostridium, Erysipelotrichales, Erysipelotrichia, Firmicutes, Bacteria

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7216..8886
DNA (1671bp) protein (557aa)
Acetolactate synthase {ECO:0000256|RuleBase:RU003591}; EC=2.2.1.6 {ECO:0000256|RuleBase:RU003591};; TaxID=999413 species="Bacteria; Firmicutes; Erysipelotrichia; Erysipelotrichales; Erysipelotrichaceae; Erysipelatoclostridium.;" source="[Clostridium] innocuum 2959.;"
ilvB; Acetolactate synthase large subunit (EC:2.2.1.6)
Acetolactate synthase n=6 Tax=Firmicutes RepID=E4LUV3_9CLOT
L3_105_000G1_scaffold_103_7
Peptoclostridium difficile, Peptoclostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

8899..9390
DNA (492bp) protein (164aa)
Acetolactate synthase, small subunit {ECO:0000313|EMBL:EQJ56958.1}; EC=2.2.1.6 {ECO:0000313|EMBL:EQJ56958.1};; TaxID=1151410 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Peptostreptococcaceae; Peptoclostridium.;" source="Peptoclostridium difficile P28.;"
ilvH; putative acetolactate synthase small subunit (EC:2.2.1.6)
Acetolactate synthase, small subunit n=5 Tax=Firmicutes RepID=E4LUV2_9CLOT
L3_105_000G1_scaffold_103_8
[Clostridium] innocuum, Erysipelatoclostridium, Erysipelotrichales, Erysipelotrichia, Firmicutes, Bacteria

Not on your lists

9450..10445
DNA (996bp) protein (332aa)
Ketol-acid reductoisomerase {ECO:0000256|HAMAP-Rule:MF_00435, ECO:0000256|SAAS:SAAS00051427}; EC=1.1.1.86 {ECO:0000256|HAMAP-Rule:MF_00435, ECO:0000256|SAAS:SAAS00051427};; Acetohydroxy-acid isomeroreductase {ECO:0000256|HAMAP-Rule:MF_00435}; Alpha-keto-beta-hydroxylacyl reductoisomerase {ECO:0000256|HAMAP-Rule:MF_00435}; TaxID=999413 species="Bacteria; Firmicutes; Erysipelotrichia; Erysipelotrichales; Erysipelotrichaceae; Erysipelatoclostridium.;" source="[Clostridium] innocuum 2959.;"
ketol-acid reductoisomerase (EC:1.1.1.86)
Ketol-acid reductoisomerase n=7 Tax=Firmicutes RepID=E4LUV1_9CLOT
L3_105_000G1_scaffold_103_9
Peptoclostridium difficile, Peptoclostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

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10459..12123
DNA (1665bp) protein (555aa)
Dihydroxy-acid dehydratase {ECO:0000256|HAMAP-Rule:MF_00012, ECO:0000256|SAAS:SAAS00023040}; Short=DAD {ECO:0000256|HAMAP-Rule:MF_00012};; EC=4.2.1.9 {ECO:0000256|HAMAP-Rule:MF_00012, ECO:0000256|SAAS:SAAS00023040};; TaxID=1151410 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Peptostreptococcaceae; Peptoclostridium.;" source="Peptoclostridium difficile P28.;"
dihydroxyacid dehydratase (EC:4.2.1.9)
Dihydroxy-acid dehydratase n=5 Tax=Firmicutes RepID=E4LUV0_9CLOT
L3_105_000G1_scaffold_103_10
Peptoclostridium difficile, Peptoclostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(12297..12878)
DNA (582bp) protein (194aa)
Uncharacterized protein n=5 Tax=Firmicutes RepID=E4LUU9_9CLOT
Uncharacterized protein {ECO:0000313|EMBL:EQJ56961.1}; TaxID=1151410 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Peptostreptococcaceae; Peptoclostridium.;" source="Peptoclostridium difficile P28.;"
hypothetical protein
L3_105_000G1_scaffold_103_11
Clostridium sp. HGF2, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

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13214..14071
DNA (858bp) protein (286aa)
Transcription antiterminator LicT n=4 Tax=Firmicutes RepID=E4LUU8_9CLOT
Transcription antiterminator LicT {ECO:0000313|EMBL:EFR37427.1}; TaxID=908340 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium sp. HGF2.;"
licT; transcription antiterminator LicT
L3_105_000G1_scaffold_103_12
Erysipelotrichaceae bacterium 6_1_45, Erysipelotrichales, Erysipelotrichia, Firmicutes, Bacteria

Not on your lists

14176..16110
DNA (1935bp) protein (645aa)
PTS system, beta-glucoside-specific IIABC component family protein (EC:2.7.1.69)
PTS system, beta-glucoside-specific, IIABC component n=3 Tax=Firmicutes RepID=E4LUU7_9CLOT
PTS system, beta-glucoside-specific IIABC component {ECO:0000313|EMBL:EHO20385.1}; TaxID=469614 species="Bacteria; Firmicutes; Erysipelotrichia; Erysipelotrichales; Erysipelotrichaceae.;" source="Erysipelotrichaceae bacterium 6_1_45.;"
L3_105_000G1_scaffold_103_13
Clostridium sp. HGF2, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

16124..17545
DNA (1422bp) protein (474aa)
6-phospho-beta-glucosidase {ECO:0000313|EMBL:EFR37373.1}; EC=3.2.1.86 {ECO:0000313|EMBL:EFR37373.1};; TaxID=908340 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium sp. HGF2.;"
Uncharacterized protein n=3 Tax=Firmicutes RepID=H1BGN0_9FIRM
glycosyl hydrolase 1 family protein
L3_105_000G1_scaffold_103_14
Clostridium sp. HGF2, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

17866..18474
DNA (609bp) protein (203aa)
Transcriptional regulator, TetR family n=4 Tax=Firmicutes RepID=E4LUU4_9CLOT
Transcriptional regulator, TetR family {ECO:0000313|EMBL:EFR37411.1}; TaxID=908340 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium sp. HGF2.;"
TetR family transcriptional regulator
L3_105_000G1_scaffold_103_15
Erysipelotrichaceae bacterium CAG:64, Erysipelotrichales, Erysipelotrichia, Firmicutes, Bacteria

Not on your lists

18529..19134
DNA (606bp) protein (202aa)
Methyltransferase domain protein n=4 Tax=Firmicutes RepID=E4LUU3_9CLOT
Uncharacterized protein {ECO:0000313|EMBL:CDC87243.1}; TaxID=1262981 species="Bacteria; Firmicutes; Erysipelotrichia; Erysipelotrichales; Erysipelotrichaceae; environmental samples.;" source="Erysipelotrichaceae bacterium CAG:64.;"
Methylase involved in ubiquinone/menaquinone biosynthesis
L3_105_000G1_scaffold_103_16
Erysipelotrichaceae bacterium CAG:64, Erysipelotrichales, Erysipelotrichia, Firmicutes, Bacteria

Not on your lists

19131..19514
DNA (384bp) protein (128aa)
Uncharacterized protein n=4 Tax=Firmicutes RepID=E4LUU2_9CLOT
Uncharacterized protein {ECO:0000313|EMBL:CDC87242.1}; TaxID=1262981 species="Bacteria; Firmicutes; Erysipelotrichia; Erysipelotrichales; Erysipelotrichaceae; environmental samples.;" source="Erysipelotrichaceae bacterium CAG:64.;"
iron dependent repressor
L3_105_000G1_scaffold_103_17
Erysipelotrichaceae bacterium CAG:64, Erysipelotrichales, Erysipelotrichia, Firmicutes, Bacteria

Not on your lists

19525..20094
DNA (570bp) protein (190aa)
DNA-3-methyladenine glycosylase I (EC:3.2.2.20)
DNA-3-methyladenine glycosylase I n=5 Tax=Firmicutes RepID=E4LUU1_9CLOT
DNA-3-methyladenine glycosylase I {ECO:0000313|EMBL:CDC87241.1}; TaxID=1262981 species="Bacteria; Firmicutes; Erysipelotrichia; Erysipelotrichales; Erysipelotrichaceae; environmental samples.;" source="Erysipelotrichaceae bacterium CAG:64.;"
L3_105_000G1_scaffold_103_18
Clostridium sp. HGF2, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

20409..21248
DNA (840bp) protein (280aa)
Transcriptional regulator, AraC family n=4 Tax=Firmicutes RepID=E4LUU0_9CLOT
Transcriptional regulator, AraC family {ECO:0000313|EMBL:EFR37366.1}; TaxID=908340 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium sp. HGF2.;"
AraC family transcriptional regulator
L3_105_000G1_scaffold_103_19
Erysipelotrichaceae bacterium CAG:64, Erysipelotrichales, Erysipelotrichia, Firmicutes, Bacteria

Not on your lists

21241..22599
DNA (1359bp) protein (453aa)
MATE efflux family protein n=2 Tax=Erysipelotrichaceae RepID=H1ATB8_9FIRM
MATE efflux family protein {ECO:0000313|EMBL:CDC87239.1}; TaxID=1262981 species="Bacteria; Firmicutes; Erysipelotrichia; Erysipelotrichales; Erysipelotrichaceae; environmental samples.;" source="Erysipelotrichaceae bacterium CAG:64.;"
MatE efflux family protein
L3_105_000G1_scaffold_103_20
Peptoclostridium difficile, Peptoclostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(22596..23111)
DNA (516bp) protein (172aa)
Uncharacterized protein n=6 Tax=Firmicutes RepID=E4LUT8_9CLOT
ECF-type riboflavin transporter, S component family protein {ECO:0000313|EMBL:EQJ56971.1}; TaxID=1151410 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Peptostreptococcaceae; Peptoclostridium.;" source="Peptoclostridium difficile P28.;"
hypothetical protein
L3_105_000G1_scaffold_103_21
Erysipelotrichaceae bacterium CAG:64, Erysipelotrichales, Erysipelotrichia, Firmicutes, Bacteria

Not on your lists

23227..24603
DNA (1377bp) protein (459aa)
Uncharacterized protein n=4 Tax=Firmicutes RepID=H1ATB6_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:CDC87237.1}; TaxID=1262981 species="Bacteria; Firmicutes; Erysipelotrichia; Erysipelotrichales; Erysipelotrichaceae; environmental samples.;" source="Erysipelotrichaceae bacterium CAG:64.;"
Transcriptional regulators containing a DNA-binding HTH domain and an aminotransferase domain (MocR family) and their eukaryotic orthologs
L3_105_000G1_scaffold_103_22
Peptoclostridium difficile, Peptoclostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

24723..25169
DNA (447bp) protein (149aa)
Uncharacterized protein n=5 Tax=Firmicutes RepID=E4LUT6_9CLOT
Uncharacterized protein {ECO:0000313|EMBL:EQJ56973.1}; TaxID=1151410 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Peptostreptococcaceae; Peptoclostridium.;" source="Peptoclostridium difficile P28.;"
L3_105_000G1_scaffold_103_23
Peptoclostridium difficile, Peptoclostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

25293..25970
DNA (678bp) protein (226aa)
Mg2+ transporter-C family protein n=5 Tax=Firmicutes RepID=E4LUT5_9CLOT
MgtC family protein {ECO:0000313|EMBL:EQJ56974.1}; TaxID=1151410 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Peptostreptococcaceae; Peptoclostridium.;" source="Peptoclostridium difficile P28.;"
cadA; Cation transport ATPase, MgtC/SapB family
L3_105_000G1_scaffold_103_24
Erysipelotrichaceae bacterium 6_1_45, Erysipelotrichales, Erysipelotrichia, Firmicutes, Bacteria

Not on your lists

26105..27502
DNA (1398bp) protein (466aa)
MATE efflux family protein n=2 Tax=unclassified Erysipelotrichaceae (miscellaneous) RepID=H1ATB3_9FIRM
MATE efflux family protein {ECO:0000313|EMBL:EHO20657.1}; TaxID=469614 species="Bacteria; Firmicutes; Erysipelotrichia; Erysipelotrichales; Erysipelotrichaceae.;" source="Erysipelotrichaceae bacterium 6_1_45.;"
putative integral membrane protein
L3_105_000G1_scaffold_103_25
Erysipelotrichaceae bacterium CAG:64, Erysipelotrichales, Erysipelotrichia, Firmicutes, Bacteria

Not on your lists

27654..28946
DNA (1293bp) protein (431aa)
GMP synthase (glutamine-hydrolyzing) {ECO:0000256|SAAS:SAAS00008728}; EC=6.3.5.2 {ECO:0000256|SAAS:SAAS00008728};; TaxID=1262981 species="Bacteria; Firmicutes; Erysipelotrichia; Erysipelotrichales; Erysipelotrichaceae; environmental samples.;" source="Erysipelotrichaceae bacterium CAG:64.;"
GMP synthase (Glutamine-hydrolyzing) domain-containing protein n=2 Tax=Erysipelotrichaceae RepID=H1ATB2_9FIRM
GMP synthase
L3_105_000G1_scaffold_103_26
Peptoclostridium difficile, Peptoclostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(29169..30374)
DNA (1206bp) protein (402aa)
Phage integrase family protein n=1 Tax=Clostridium difficile P28 RepID=T4NNT9_CLODI
Phage integrase family protein {ECO:0000313|EMBL:EQJ56977.1}; TaxID=1151410 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Peptostreptococcaceae; Peptoclostridium.;" source="Peptoclostridium difficile P28.;"
integrase family protein
L3_105_000G1_scaffold_103_27
Peptoclostridium difficile, Peptoclostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

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comp(30376..30714)
DNA (339bp) protein (113aa)
Uncharacterized protein n=1 Tax=Clostridium difficile P28 RepID=T4NI03_CLODI
Uncharacterized protein {ECO:0000313|EMBL:EQJ56978.1}; TaxID=1151410 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Peptostreptococcaceae; Peptoclostridium.;" source="Peptoclostridium difficile P28.;"
hypothetical protein
L3_105_000G1_scaffold_103_28
Peptoclostridium difficile, Peptoclostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

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31044..31865
DNA (822bp) protein (274aa)
CobQ/CobB/MinD/ParA nucleotide binding domain protein n=1 Tax=Clostridium difficile P28 RepID=T4NNM4_CLODI
CobQ/CobB/MinD/ParA nucleotide binding domain protein {ECO:0000313|EMBL:EQJ56979.1}; TaxID=1151410 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Peptostreptococcaceae; Peptoclostridium.;" source="Peptoclostridium difficile P28.;"
chromosome partitioning protein ParA
L3_105_000G1_scaffold_103_29
Peptoclostridium difficile, Peptoclostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

31822..32775
DNA (954bp) protein (318aa)
ParB/RepB/Spo0J family partition domain protein n=1 Tax=Clostridium difficile P28 RepID=T4NNH6_CLODI
ParB/RepB/Spo0J family partition domain protein {ECO:0000313|EMBL:EQJ56980.1}; TaxID=1151410 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Peptostreptococcaceae; Peptoclostridium.;" source="Peptoclostridium difficile P28.;"
plasmid stablization protein ParB
L3_105_000G1_scaffold_103_30
unknown

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32991..33107
DNA (117bp) protein (39aa)

This feature has no annotations

Displaying items 1-30 of 122 in total

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