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L3_105_000G1_scaffold_108

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Displaying items 1-30 of 110 in total
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
L3_105_000G1_scaffold_108_1
Peptoclostridium difficile, Peptoclostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

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comp(143..1834)
DNA (1692bp) protein (564aa)
nrsD; Lipid A export ATP-binding/permease protein (EC:3.6.3.-)
Uncharacterized protein n=3 Tax=Firmicutes RepID=H1ATT3_9FIRM
ABC transporter family protein {ECO:0000313|EMBL:EQJ58562.1}; TaxID=1151410 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Peptostreptococcaceae; Peptoclostridium.;" source="Peptoclostridium difficile P28.;"
L3_105_000G1_scaffold_108_2
Peptoclostridium difficile, Peptoclostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(1827..2600)
DNA (774bp) protein (258aa)
Uncharacterized protein n=4 Tax=Firmicutes RepID=H1ATT4_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:EQJ58563.1}; TaxID=1151410 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Peptostreptococcaceae; Peptoclostridium.;" source="Peptoclostridium difficile P28.;"
L3_105_000G1_scaffold_108_3
[Clostridium] innocuum, Erysipelatoclostridium, Erysipelotrichales, Erysipelotrichia, Firmicutes, Bacteria

Not on your lists

comp(3174..3710)
DNA (537bp) protein (179aa)
Ribosomal subunit interface protein n=7 Tax=Firmicutes RepID=E4LPR4_9CLOT
Ribosomal subunit interface protein {ECO:0000313|EMBL:ENY85205.1}; TaxID=999413 species="Bacteria; Firmicutes; Erysipelotrichia; Erysipelotrichales; Erysipelotrichaceae; Erysipelatoclostridium.;" source="[Clostridium] innocuum 2959.;"
ribosomal subunit interface protein
L3_105_000G1_scaffold_108_4
Peptoclostridium difficile, Peptoclostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

3913..4332
DNA (420bp) protein (140aa)
Uncharacterized protein n=5 Tax=Firmicutes RepID=E4LPR5_9CLOT
Uncharacterized protein {ECO:0000313|EMBL:EQJ58566.1}; TaxID=1151410 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Peptostreptococcaceae; Peptoclostridium.;" source="Peptoclostridium difficile P28.;"
hypothetical protein
L3_105_000G1_scaffold_108_5
Clostridium sp. HGF2, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(4711..8814)
DNA (4104bp) protein (1368aa)
Pilin isopeptide linkage domain protein n=4 Tax=Firmicutes RepID=E4LPR6_9CLOT
Pilin isopeptide linkage domain protein {ECO:0000313|EMBL:EFR39194.1}; TaxID=908340 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium sp. HGF2.;"
LPXTG-motif cell wall anchor domain-containing protein
L3_105_000G1_scaffold_108_6
Peptoclostridium difficile, Peptoclostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(8798..8947)
DNA (150bp) protein (50aa)
Uncharacterized protein n=4 Tax=Firmicutes RepID=E4LPR7_9CLOT
Uncharacterized protein {ECO:0000313|EMBL:EQJ58570.1}; TaxID=1151410 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Peptostreptococcaceae; Peptoclostridium.;" source="Peptoclostridium difficile P28.;"
L3_105_000G1_scaffold_108_7
Clostridium sp. HGF2, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(9237..10166)
DNA (930bp) protein (310aa)
M19 family membrane dipeptidase (EC:3.4.13.19)
Renal dipeptidase family protein n=3 Tax=Firmicutes RepID=E4LPR8_9CLOT
Renal dipeptidase family protein {ECO:0000313|EMBL:EFR39193.1}; TaxID=908340 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium sp. HGF2.;"
L3_105_000G1_scaffold_108_8
Erysipelotrichaceae bacterium 2_2_44A, Erysipelotrichales, Erysipelotrichia, Firmicutes, Bacteria

Not on your lists

comp(10279..11253)
DNA (975bp) protein (325aa)
Uncharacterized protein n=6 Tax=Firmicutes RepID=E4LPR9_9CLOT
Uncharacterized protein {ECO:0000313|EMBL:EGX76959.1}; TaxID=457422 species="Bacteria; Firmicutes; Erysipelotrichia; Erysipelotrichales; Erysipelotrichaceae.;" source="Erysipelotrichaceae bacterium 2_2_44A.;"
hypothetical protein
L3_105_000G1_scaffold_108_9
[Clostridium] innocuum, Erysipelatoclostridium, Erysipelotrichales, Erysipelotrichia, Firmicutes, Bacteria

Not on your lists

comp(11352..13205)
DNA (1854bp) protein (618aa)
ATP-dependent zinc metalloprotease FtsH {ECO:0000256|HAMAP-Rule:MF_01458}; EC=3.4.24.- {ECO:0000256|HAMAP-Rule:MF_01458};; TaxID=999413 species="Bacteria; Firmicutes; Erysipelotrichia; Erysipelotrichales; Erysipelotrichaceae; Erysipelatoclostridium.;" source="[Clostridium] innocuum 2959.;"
ATP-dependent metalloprotease FtsH (EC:3.4.24.-)
ATP-dependent zinc metalloprotease FtsH n=5 Tax=Firmicutes RepID=E4LPS0_9CLOT
L3_105_000G1_scaffold_108_10
Erysipelotrichaceae bacterium 6_1_45, Erysipelotrichales, Erysipelotrichia, Firmicutes, Bacteria

Not on your lists

13812..14966
DNA (1155bp) protein (385aa)
Uncharacterized protein n=1 Tax=Erysipelotrichaceae bacterium 6_1_45 RepID=H1BGF5_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:EHO20552.1}; TaxID=469614 species="Bacteria; Firmicutes; Erysipelotrichia; Erysipelotrichales; Erysipelotrichaceae.;" source="Erysipelotrichaceae bacterium 6_1_45.;"
L3_105_000G1_scaffold_108_11
Clostridium sp. HGF2, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(15045..15746)
DNA (702bp) protein (234aa)
TIGR00659 family protein n=5 Tax=Firmicutes RepID=H1ATU3_9FIRM
Putative TIGR00659 family protein {ECO:0000313|EMBL:EFR39136.1}; TaxID=908340 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium sp. HGF2.;"
lrgB-like family protein
L3_105_000G1_scaffold_108_12
Clostridium sp. HGF2, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(15743..16096)
DNA (354bp) protein (118aa)
LrgA family protein n=2 Tax=Firmicutes RepID=E4LPS3_9CLOT
LrgA family protein {ECO:0000313|EMBL:EFR39123.1}; TaxID=908340 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium sp. HGF2.;"
LrgA family protein
L3_105_000G1_scaffold_108_13
Clostridium sp. HGF2, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(16093..17976)
DNA (1884bp) protein (628aa)
UPF0313 protein HMPREF9406_0631 n=2 Tax=Firmicutes RepID=E4LPS4_9CLOT
UPF0313 protein HMPREF9406_0631 {ECO:0000256|HAMAP-Rule:MF_01251}; TaxID=908340 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium sp. HGF2.;"
Fe-S oxidoreductase
L3_105_000G1_scaffold_108_14
Clostridium sp. HGF2, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(18953..19873)
DNA (921bp) protein (307aa)
CorA-like Mg2+ transporter family protein n=2 Tax=Clostridiales RepID=T4NST7_CLODI
Putative magnesium and cobalt transport protein CorA {ECO:0000313|EMBL:EFR39214.1}; TaxID=908340 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium sp. HGF2.;"
magnesium and cobalt transporter
L3_105_000G1_scaffold_108_15
Erysipelotrichaceae bacterium 6_1_45, Erysipelotrichales, Erysipelotrichia, Firmicutes, Bacteria

Not on your lists

comp(20199..21050)
DNA (852bp) protein (284aa)
Uncharacterized protein n=1 Tax=Erysipelotrichaceae bacterium 6_1_45 RepID=H1BGG0_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:EHO20557.1}; TaxID=469614 species="Bacteria; Firmicutes; Erysipelotrichia; Erysipelotrichales; Erysipelotrichaceae.;" source="Erysipelotrichaceae bacterium 6_1_45.;"
hypothetical protein
L3_105_000G1_scaffold_108_16
Clostridium sp. HGF2, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(21043..22506)
DNA (1464bp) protein (488aa)
Uncharacterized protein n=5 Tax=Firmicutes RepID=E4LPS8_9CLOT
Uncharacterized protein {ECO:0000313|EMBL:EFR39133.1}; TaxID=908340 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium sp. HGF2.;"
Domain of unknown function(DUF2779).
L3_105_000G1_scaffold_108_17
Peptoclostridium difficile, Peptoclostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(22556..23497)
DNA (942bp) protein (314aa)
HTH domain protein n=3 Tax=Firmicutes RepID=E4LPS9_9CLOT
WYL domain protein {ECO:0000313|EMBL:EQJ58585.1}; TaxID=1151410 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Peptostreptococcaceae; Peptoclostridium.;" source="Peptoclostridium difficile P28.;"
Predicted transcriptional regulator
L3_105_000G1_scaffold_108_18
[Clostridium] innocuum, Erysipelatoclostridium, Erysipelotrichales, Erysipelotrichia, Firmicutes, Bacteria

Not on your lists

comp(23510..23866)
DNA (357bp) protein (119aa)
Uncharacterized protein n=6 Tax=Firmicutes RepID=G1VM27_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:ENY85190.1}; TaxID=999413 species="Bacteria; Firmicutes; Erysipelotrichia; Erysipelotrichales; Erysipelotrichaceae; Erysipelatoclostridium.;" source="[Clostridium] innocuum 2959.;"
L3_105_000G1_scaffold_108_19
Peptoclostridium difficile, Peptoclostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(24130..24750)
DNA (621bp) protein (207aa)
Uncharacterized protein n=3 Tax=Firmicutes RepID=E4LPT1_9CLOT
Putative lipoprotein {ECO:0000313|EMBL:EQJ58588.1}; TaxID=1151410 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Peptostreptococcaceae; Peptoclostridium.;" source="Peptoclostridium difficile P28.;"
L3_105_000G1_scaffold_108_20
Clostridium sp. HGF2, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(24795..26048)
DNA (1254bp) protein (418aa)
UV damage endonuclease UvdE n=2 Tax=Clostridiales RepID=E4LPT2_9CLOT
UV damage endonuclease UvdE {ECO:0000313|EMBL:EFR39180.1}; TaxID=908340 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium sp. HGF2.;"
uvsE; putative UV damage endonuclease
L3_105_000G1_scaffold_108_21
Peptoclostridium difficile, Peptoclostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

26242..27018
DNA (777bp) protein (259aa)
HAD hydrolase, family IIB n=5 Tax=Firmicutes RepID=E4LPT4_9CLOT
HAD hydrolase, IIB family protein {ECO:0000313|EMBL:EQJ58591.1}; TaxID=1151410 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Peptostreptococcaceae; Peptoclostridium.;" source="Peptoclostridium difficile P28.;"
HAD-superfamily hydrolase, subfamily IIB
L3_105_000G1_scaffold_108_22
Peptoclostridium difficile, Peptoclostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(27437..27874)
DNA (438bp) protein (146aa)
Uncharacterized protein n=5 Tax=Firmicutes RepID=G1VM23_9FIRM
MarR family protein {ECO:0000313|EMBL:EQJ58593.1}; TaxID=1151410 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Peptostreptococcaceae; Peptoclostridium.;" source="Peptoclostridium difficile P28.;"
multidrug resistance operon repressor
L3_105_000G1_scaffold_108_23
Clostridium sp. HGF2, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

28032..29099
DNA (1068bp) protein (356aa)
Uncharacterized protein n=4 Tax=Firmicutes RepID=E4LPT8_9CLOT
Uncharacterized protein {ECO:0000313|EMBL:EFR39166.1}; TaxID=908340 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium sp. HGF2.;"
hypothetical protein
L3_105_000G1_scaffold_108_24
Erysipelotrichaceae bacterium CAG:64, Erysipelotrichales, Erysipelotrichia, Firmicutes, Bacteria

Not on your lists

comp(29341..29469)
DNA (129bp) protein (43aa)
Uncharacterized protein n=7 Tax=Firmicutes RepID=G1VM21_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:CDC86525.1}; TaxID=1262981 species="Bacteria; Firmicutes; Erysipelotrichia; Erysipelotrichales; Erysipelotrichaceae; environmental samples.;" source="Erysipelotrichaceae bacterium CAG:64.;"
L3_105_000G1_scaffold_108_25
[Clostridium] innocuum, Erysipelatoclostridium, Erysipelotrichales, Erysipelotrichia, Firmicutes, Bacteria

Not on your lists

comp(29557..30132)
DNA (576bp) protein (192aa)
Potassium-transporting ATPase C chain {ECO:0000256|HAMAP-Rule:MF_00276}; EC=3.6.3.12 {ECO:0000256|HAMAP-Rule:MF_00276};; ATP phosphohydrolase [potassium-transporting] C chain {ECO:0000256|HAMAP-Rule:MF_00276}; Potassium-binding and translocating subunit C {ECO:0000256|HAMAP-Rule:MF_00276}; Potassium-translocating ATPase C chain {ECO:0000256|HAMAP-Rule:MF_00276}; TaxID=999413 species="Bacteria; Firmicutes; Erysipelotrichia; Erysipelotrichales; Erysipelotrichaceae; Erysipelatoclostridium.;" source="[Clostridium] innocuum 2959.;"
potassium-transporting ATPase subunit C (EC:3.6.3.12)
Potassium-transporting ATPase C chain n=6 Tax=Firmicutes RepID=G1VM20_9FIRM
L3_105_000G1_scaffold_108_26
Erysipelotrichaceae bacterium CAG:64, Erysipelotrichales, Erysipelotrichia, Firmicutes, Bacteria

Not on your lists

comp(30144..32201)
DNA (2058bp) protein (686aa)
Potassium-transporting ATPase B chain {ECO:0000256|HAMAP-Rule:MF_00285}; EC=3.6.3.12 {ECO:0000256|HAMAP-Rule:MF_00285};; ATP phosphohydrolase [potassium-transporting] B chain {ECO:0000256|HAMAP-Rule:MF_00285}; Potassium-binding and translocating subunit B {ECO:0000256|HAMAP-Rule:MF_00285}; Potassium-translocating ATPase B chain {ECO:0000256|HAMAP-Rule:MF_00285}; TaxID=1262981 species="Bacteria; Firmicutes; Erysipelotrichia; Erysipelotrichales; Erysipelotrichaceae; environmental samples.;" source="Erysipelotrichaceae bacterium CAG:64.;"
kdpB; potassium-transporting ATPase subunit B (EC:3.6.3.12)
Potassium-transporting ATPase B chain n=4 Tax=Firmicutes RepID=E4LPU1_9CLOT
L3_105_000G1_scaffold_108_27
Erysipelotrichaceae bacterium CAG:64, Erysipelotrichales, Erysipelotrichia, Firmicutes, Bacteria

Not on your lists

comp(32220..33938)
DNA (1719bp) protein (573aa)
Potassium-transporting ATPase A chain {ECO:0000256|HAMAP-Rule:MF_00275}; EC=3.6.3.12 {ECO:0000256|HAMAP-Rule:MF_00275};; ATP phosphohydrolase [potassium-transporting] A chain {ECO:0000256|HAMAP-Rule:MF_00275}; Potassium-binding and translocating subunit A {ECO:0000256|HAMAP-Rule:MF_00275}; Potassium-translocating ATPase A chain {ECO:0000256|HAMAP-Rule:MF_00275}; TaxID=1262981 species="Bacteria; Firmicutes; Erysipelotrichia; Erysipelotrichales; Erysipelotrichaceae; environmental samples.;" source="Erysipelotrichaceae bacterium CAG:64.;"
potassium-transporting ATPase subunit A (EC:3.6.3.12)
Potassium-transporting ATPase A chain n=4 Tax=Firmicutes RepID=E4LPU2_9CLOT
L3_105_000G1_scaffold_108_28
Clostridium sp. HGF2, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(34695..35378)
DNA (684bp) protein (228aa)
Response regulator receiver domain protein n=7 Tax=Firmicutes RepID=E4LPU3_9CLOT
Response regulator receiver domain protein {ECO:0000313|EMBL:EFR39224.1}; TaxID=908340 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium sp. HGF2.;"
two component transcriptional regulator
L3_105_000G1_scaffold_108_29
Erysipelotrichaceae bacterium CAG:64, Erysipelotrichales, Erysipelotrichia, Firmicutes, Bacteria

Not on your lists

comp(35371..36918)
DNA (1548bp) protein (516aa)
Histidine kinase {ECO:0000256|SAAS:SAAS00251121}; EC=2.7.13.3 {ECO:0000256|SAAS:SAAS00251121};; TaxID=1262981 species="Bacteria; Firmicutes; Erysipelotrichia; Erysipelotrichales; Erysipelotrichaceae; environmental samples.;" source="Erysipelotrichaceae bacterium CAG:64.;"
kdpD; sensor protein KdpD (EC:2.7.13.3)
Uncharacterized protein n=2 Tax=Erysipelotrichaceae RepID=H1ATW1_9FIRM
L3_105_000G1_scaffold_108_30
Clostridium sp. HGF2, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(36915..38417)
DNA (1503bp) protein (501aa)
Potassium uptake protein, TrkH family n=2 Tax=Clostridiales RepID=E4LPU5_9CLOT
Potassium uptake protein, TrkH family {ECO:0000313|EMBL:EFR39263.1}; TaxID=908340 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium sp. HGF2.;"
cation transporter
Displaying items 1-30 of 110 in total

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