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L3_105_000G1_scaffold_119

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Displaying items 1-30 of 97 in total
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
L3_105_000G1_scaffold_119_1
Peptoclostridium difficile, Peptoclostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

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comp(120..1034)
DNA (915bp) protein (305aa)
Acetyltransferase, GNAT family n=5 Tax=Firmicutes RepID=E4LYJ4_9CLOT
Acetyltransferase family protein {ECO:0000313|EMBL:EQJ55149.1}; TaxID=1151410 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Peptostreptococcaceae; Peptoclostridium.;" source="Peptoclostridium difficile P28.;"
hypothetical protein
L3_105_000G1_scaffold_119_2
[Clostridium] innocuum, Erysipelatoclostridium, Erysipelotrichales, Erysipelotrichia, Firmicutes, Bacteria

Not on your lists

comp(1038..1304)
DNA (267bp) protein (89aa)
Uncharacterized protein n=7 Tax=Firmicutes RepID=E4LYJ5_9CLOT
Uncharacterized protein {ECO:0000313|EMBL:ENY87848.1}; TaxID=999413 species="Bacteria; Firmicutes; Erysipelotrichia; Erysipelotrichales; Erysipelotrichaceae; Erysipelatoclostridium.;" source="[Clostridium] innocuum 2959.;"
L3_105_000G1_scaffold_119_3
Peptoclostridium difficile, Peptoclostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(1377..1931)
DNA (555bp) protein (185aa)
Uncharacterized protein n=3 Tax=Firmicutes RepID=E4LYJ6_9CLOT
Putative thermonuclease {ECO:0000313|EMBL:EQJ55151.1}; TaxID=1151410 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Peptostreptococcaceae; Peptoclostridium.;" source="Peptoclostridium difficile P28.;"
L3_105_000G1_scaffold_119_4
[Clostridium] innocuum, Erysipelatoclostridium, Erysipelotrichales, Erysipelotrichia, Firmicutes, Bacteria

Not on your lists

comp(1969..2907)
DNA (939bp) protein (313aa)
Putative sporulation transcription regulator WhiA n=7 Tax=Firmicutes RepID=E4LYJ7_9CLOT
Putative sporulation transcription regulator WhiA {ECO:0000256|HAMAP-Rule:MF_01420, ECO:0000256|SAAS:SAAS00005305}; TaxID=999413 species="Bacteria; Firmicutes; Erysipelotrichia; Erysipelotrichales; Erysipelotrichaceae; Erysipelatoclostridium.;" source="[Clostridium] innocuum 2959.;"
hypothetical protein
L3_105_000G1_scaffold_119_5
Erysipelotrichaceae bacterium CAG:64, Erysipelotrichales, Erysipelotrichia, Firmicutes, Bacteria

Not on your lists

comp(2910..3857)
DNA (948bp) protein (316aa)
Putative gluconeogenesis factor n=3 Tax=Firmicutes RepID=H1B1J5_9FIRM
Putative gluconeogenesis factor {ECO:0000256|HAMAP-Rule:MF_00973}; TaxID=1262981 species="Bacteria; Firmicutes; Erysipelotrichia; Erysipelotrichales; Erysipelotrichaceae; environmental samples.;" source="Erysipelotrichaceae bacterium CAG:64.;"
hypothetical protein
L3_105_000G1_scaffold_119_6
Erysipelotrichaceae bacterium CAG:64, Erysipelotrichales, Erysipelotrichia, Firmicutes, Bacteria

Not on your lists

comp(3862..4716)
DNA (855bp) protein (285aa)
UPF0042 nucleotide-binding protein HMPREF0982_03314 n=3 Tax=Firmicutes RepID=H1B1J6_9FIRM
Nucleotide-binding protein BN746_01015 {ECO:0000256|HAMAP-Rule:MF_00636}; TaxID=1262981 species="Bacteria; Firmicutes; Erysipelotrichia; Erysipelotrichales; Erysipelotrichaceae; environmental samples.;" source="Erysipelotrichaceae bacterium CAG:64.;"
ATP-binding protein
L3_105_000G1_scaffold_119_7
Peptoclostridium difficile, Peptoclostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

5238..5669
DNA (432bp) protein (144aa)
Uncharacterized protein n=5 Tax=Firmicutes RepID=G1VRS0_9FIRM
Acetyltransferase family protein {ECO:0000313|EMBL:EQJ55155.1}; TaxID=1151410 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Peptostreptococcaceae; Peptoclostridium.;" source="Peptoclostridium difficile P28.;"
N-acetyltransferase GCN5
L3_105_000G1_scaffold_119_8
Peptoclostridium difficile, Peptoclostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

5666..6583
DNA (918bp) protein (306aa)
Ribokinase {ECO:0000313|EMBL:EQJ55156.1}; EC=2.7.1.15 {ECO:0000313|EMBL:EQJ55156.1};; TaxID=1151410 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Peptostreptococcaceae; Peptoclostridium.;" source="Peptoclostridium difficile P28.;"
Ribokinase n=5 Tax=Firmicutes RepID=E4LYK1_9CLOT
ribokinase-like domain-containing protein
L3_105_000G1_scaffold_119_9
Peptoclostridium difficile, Peptoclostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

6585..7505
DNA (921bp) protein (307aa)
Non-specific ribonucleoside hydrolase rihC {ECO:0000313|EMBL:EQJ55157.1}; EC=3.2.-.- {ECO:0000313|EMBL:EQJ55157.1};; TaxID=1151410 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Peptostreptococcaceae; Peptoclostridium.;" source="Peptoclostridium difficile P28.;"
Inosine-uridine preferring nucleoside hydrolase n=5 Tax=Firmicutes RepID=E4LYK2_9CLOT
ribonucleoside hydrolase RihC
L3_105_000G1_scaffold_119_10
Peptoclostridium difficile, Peptoclostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

7535..8950
DNA (1416bp) protein (472aa)
Transporter, anaerobic C4-dicarboxylate uptake C (DcuC) family n=5 Tax=Firmicutes RepID=E4LYK3_9CLOT
Transporter, anaerobic C4-dicarboxylate uptake C family protein {ECO:0000313|EMBL:EQJ55158.1}; TaxID=1151410 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Peptostreptococcaceae; Peptoclostridium.;" source="Peptoclostridium difficile P28.;"
anaerobic C4-dicarboxylate transporter
L3_105_000G1_scaffold_119_11
Peptoclostridium difficile, Peptoclostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

9045..10052
DNA (1008bp) protein (336aa)
LacI family transcriptional regulator (EC:5.1.1.1)
Helix-turn-helix family protein n=1 Tax=Clostridium difficile P28 RepID=T4NIP3_CLODI
Helix-turn-helix family protein {ECO:0000313|EMBL:EQJ55159.1}; TaxID=1151410 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Peptostreptococcaceae; Peptoclostridium.;" source="Peptoclostridium difficile P28.;"
L3_105_000G1_scaffold_119_12
Peptoclostridium difficile, Peptoclostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(10141..11928)
DNA (1788bp) protein (596aa)
Uncharacterized protein n=1 Tax=Clostridium difficile P28 RepID=T4NIE2_CLODI
Uncharacterized protein {ECO:0000313|EMBL:EQJ55160.1}; TaxID=1151410 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Peptostreptococcaceae; Peptoclostridium.;" source="Peptoclostridium difficile P28.;"
L3_105_000G1_scaffold_119_13
Clostridium sp. HGF2, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(12337..12495)
DNA (159bp) protein (53aa)
Rubredoxin (EC:1.18.1.1)
Rubredoxin n=5 Tax=Firmicutes RepID=E4M001_9CLOT
Rubredoxin {ECO:0000256|PIRNR:PIRNR000071}; TaxID=908340 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium sp. HGF2.;"
L3_105_000G1_scaffold_119_14
Erysipelotrichaceae bacterium CAG:64, Erysipelotrichales, Erysipelotrichia, Firmicutes, Bacteria

Not on your lists

comp(12498..13418)
DNA (921bp) protein (307aa)
Thioredoxin reductase {ECO:0000256|RuleBase:RU003881}; EC=1.8.1.9 {ECO:0000256|RuleBase:RU003881};; TaxID=1262981 species="Bacteria; Firmicutes; Erysipelotrichia; Erysipelotrichales; Erysipelotrichaceae; environmental samples.;" source="Erysipelotrichaceae bacterium CAG:64.;"
Thioredoxin reductase n=3 Tax=Erysipelotrichaceae RepID=H1B1K4_9FIRM
thioredoxin-disulfide reductase
L3_105_000G1_scaffold_119_15
Peptoclostridium difficile, Peptoclostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(13397..14869)
DNA (1473bp) protein (491aa)
Prolipoprotein diacylglyceryl transferase {ECO:0000256|HAMAP-Rule:MF_01147, ECO:0000256|SAAS:SAAS00117220}; EC=2.4.99.- {ECO:0000256|HAMAP-Rule:MF_01147, ECO:0000256|SAAS:SAAS00117311};; TaxID=1151410 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Peptostreptococcaceae; Peptoclostridium.;" source="Peptoclostridium difficile P28.;"
Prolipoprotein diacylglyceryl transferase n=5 Tax=Firmicutes RepID=E4M003_9CLOT
prolipoprotein diacylglyceryl transferase
L3_105_000G1_scaffold_119_16
Clostridium sp. HGF2, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(14879..15829)
DNA (951bp) protein (317aa)
HPr kinase/phosphorylase {ECO:0000256|HAMAP-Rule:MF_01249, ECO:0000256|SAAS:SAAS00058411}; Short=HPrK/P {ECO:0000256|HAMAP-Rule:MF_01249};; EC=2.7.11.- {ECO:0000256|HAMAP-Rule:MF_01249, ECO:0000256|SAAS:SAAS00058427};; EC=2.7.4.- {ECO:0000256|HAMAP-Rule:MF_01249, ECO:0000256|SAAS:SAAS00058435};; HPr(Ser) kinase/phosphorylase {ECO:0000256|HAMAP-Rule:MF_01249}; TaxID=908340 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium sp. HGF2.;"
Hpr(Ser) kinase/phosphatase (EC:2.7.11.- 2.7.4.- 2.7.1.-)
HPr kinase/phosphorylase n=7 Tax=Firmicutes RepID=E4M004_9CLOT
L3_105_000G1_scaffold_119_17
Clostridium sp. HGF2, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(15829..18651)
DNA (2823bp) protein (941aa)
UvrABC system protein A n=3 Tax=Firmicutes RepID=E4M005_9CLOT
UvrABC system protein A {ECO:0000256|HAMAP-Rule:MF_00205, ECO:0000256|SAAS:SAAS00088996}; Short=UvrA protein {ECO:0000256|HAMAP-Rule:MF_00205};; Excinuclease ABC subunit A {ECO:0000256|HAMAP-Rule:MF_00205}; TaxID=908340 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium sp. HGF2.;"
uvrA; excinuclease ABC subunit A
L3_105_000G1_scaffold_119_18
Clostridium sp. HGF2, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

18823..19353
DNA (531bp) protein (177aa)
Uncharacterized protein n=3 Tax=Firmicutes RepID=E4M006_9CLOT
Uncharacterized protein {ECO:0000313|EMBL:EFR35593.1}; TaxID=908340 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium sp. HGF2.;"
L3_105_000G1_scaffold_119_19
[Clostridium] innocuum, Erysipelatoclostridium, Erysipelotrichales, Erysipelotrichia, Firmicutes, Bacteria

Not on your lists

19411..19893
DNA (483bp) protein (161aa)
Sigma-70 region 2 n=7 Tax=Firmicutes RepID=E4M007_9CLOT
Sigma-70 family RNA polymerase sigma factor {ECO:0000313|EMBL:ENY87865.1}; TaxID=999413 species="Bacteria; Firmicutes; Erysipelotrichia; Erysipelotrichales; Erysipelotrichaceae; Erysipelatoclostridium.;" source="[Clostridium] innocuum 2959.;"
sigV; DNA-directed RNA polymerase specialized sigma subunit
L3_105_000G1_scaffold_119_20
Peptoclostridium difficile, Peptoclostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

19880..20629
DNA (750bp) protein (250aa)
Uncharacterized protein n=5 Tax=Firmicutes RepID=E4M008_9CLOT
Uncharacterized protein {ECO:0000313|EMBL:EQJ55168.1}; TaxID=1151410 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Peptostreptococcaceae; Peptoclostridium.;" source="Peptoclostridium difficile P28.;"
hypothetical protein
L3_105_000G1_scaffold_119_21
Clostridium sp. HGF2, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(20932..21786)
DNA (855bp) protein (285aa)
EDD domain protein, DegV family n=5 Tax=Firmicutes RepID=E4M009_9CLOT
EDD domain protein, DegV family {ECO:0000313|EMBL:EFR35565.1}; TaxID=908340 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium sp. HGF2.;"
DegV family protein
L3_105_000G1_scaffold_119_22
Peptoclostridium difficile, Peptoclostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(21902..22756)
DNA (855bp) protein (285aa)
EDD domain protein, DegV family n=2 Tax=Clostridiales RepID=E4M010_9CLOT
EDD, DegV family domain protein {ECO:0000313|EMBL:EQJ55170.1}; TaxID=1151410 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Peptostreptococcaceae; Peptoclostridium.;" source="Peptoclostridium difficile P28.;"
DegV family protein
L3_105_000G1_scaffold_119_23
Erysipelotrichaceae bacterium CAG:64, Erysipelotrichales, Erysipelotrichia, Firmicutes, Bacteria

Not on your lists

comp(22905..25043)
DNA (2139bp) protein (713aa)
Pullulanase, type I n=2 Tax=Erysipelotrichaceae RepID=H1B1L3_9FIRM
Pullulanase type I {ECO:0000313|EMBL:CDC86596.1}; TaxID=1262981 species="Bacteria; Firmicutes; Erysipelotrichia; Erysipelotrichales; Erysipelotrichaceae; environmental samples.;" source="Erysipelotrichaceae bacterium CAG:64.;"
pullulanase
L3_105_000G1_scaffold_119_24
Peptoclostridium difficile, Peptoclostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(25527..26684)
DNA (1158bp) protein (386aa)
Amidohydrolase n=4 Tax=Firmicutes RepID=E4M013_9CLOT
Amidohydrolase family protein {ECO:0000313|EMBL:EQJ55174.1}; TaxID=1151410 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Peptostreptococcaceae; Peptoclostridium.;" source="Peptoclostridium difficile P28.;"
amidohydrolase
L3_105_000G1_scaffold_119_25
Clostridium sp. HGF2, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(26797..29211)
DNA (2415bp) protein (805aa)
Alpha-1,4 glucan phosphorylase {ECO:0000256|RuleBase:RU000587}; EC=2.4.1.1 {ECO:0000256|RuleBase:RU000587};; TaxID=908340 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium sp. HGF2.;"
glgP; glycogen phosphorylase (EC:2.4.1.1)
Phosphorylase n=5 Tax=Firmicutes RepID=E4M014_9CLOT
L3_105_000G1_scaffold_119_26
Peptoclostridium difficile, Peptoclostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(29513..30157)
DNA (645bp) protein (215aa)
Uncharacterized protein n=5 Tax=Firmicutes RepID=E4M015_9CLOT
Uncharacterized protein {ECO:0000313|EMBL:EQJ55176.1}; TaxID=1151410 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Peptostreptococcaceae; Peptoclostridium.;" source="Peptoclostridium difficile P28.;"
L3_105_000G1_scaffold_119_27
Peptoclostridium difficile, Peptoclostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(30621..31568)
DNA (948bp) protein (316aa)
Glycosyltransferase, group 2 family protein n=5 Tax=Firmicutes RepID=E4M016_9CLOT
Glycosyl transferase 2 family protein {ECO:0000313|EMBL:EQJ55178.1}; TaxID=1151410 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Peptostreptococcaceae; Peptoclostridium.;" source="Peptoclostridium difficile P28.;"
Glycosyltransferases involved in cell wall biogenesis
L3_105_000G1_scaffold_119_28
Peptoclostridium difficile, Peptoclostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(31587..31988)
DNA (402bp) protein (134aa)
Cell wall teichoic acid glycosylation protein GtcA n=4 Tax=Firmicutes RepID=E4M017_9CLOT
GtrA-like family protein {ECO:0000313|EMBL:EQJ55179.1}; TaxID=1151410 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Peptostreptococcaceae; Peptoclostridium.;" source="Peptoclostridium difficile P28.;"
teichoic acid glycosylation protein
L3_105_000G1_scaffold_119_29
Erysipelotrichaceae bacterium 6_1_45, Erysipelotrichales, Erysipelotrichia, Firmicutes, Bacteria

Not on your lists

comp(32252..34129)
DNA (1878bp) protein (626aa)
Histidine kinase {ECO:0000256|SAAS:SAAS00155656}; EC=2.7.13.3 {ECO:0000256|SAAS:SAAS00155656};; TaxID=469614 species="Bacteria; Firmicutes; Erysipelotrichia; Erysipelotrichales; Erysipelotrichaceae.;" source="Erysipelotrichaceae bacterium 6_1_45.;"
Uncharacterized protein n=1 Tax=Erysipelotrichaceae bacterium 6_1_45 RepID=H1B6E4_9FIRM
signal transduction histidine kinase
L3_105_000G1_scaffold_119_30
Peptoclostridium difficile, Peptoclostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(34122..34823)
DNA (702bp) protein (234aa)
Response regulator receiver domain protein n=5 Tax=Firmicutes RepID=E4M019_9CLOT
Transcriptional regulatory family protein {ECO:0000313|EMBL:EQJ55181.1}; TaxID=1151410 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Peptostreptococcaceae; Peptoclostridium.;" source="Peptoclostridium difficile P28.;"
OmpR; response regulator consisting of a CheY-like receiver domain
Displaying items 1-30 of 97 in total

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