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L3_105_000G1_scaffold_125

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Displaying items 1-30 of 116 in total
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
L3_105_000G1_scaffold_125_1
Erysipelotrichaceae bacterium CAG:64, Erysipelotrichales, Erysipelotrichia, Firmicutes, Bacteria

Not on your lists

comp(437..544)
DNA (108bp) protein (36aa)
Uncharacterized protein n=4 Tax=Erysipelotrichaceae RepID=H1AXK1_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:CDC85301.1}; TaxID=1262981 species="Bacteria; Firmicutes; Erysipelotrichia; Erysipelotrichales; Erysipelotrichaceae; environmental samples.;" source="Erysipelotrichaceae bacterium CAG:64.;"
L3_105_000G1_scaffold_125_2
Erysipelotrichaceae bacterium CAG:64, Erysipelotrichales, Erysipelotrichia, Firmicutes, Bacteria

Not on your lists

comp(544..933)
DNA (390bp) protein (130aa)
Uncharacterized protein n=4 Tax=Firmicutes RepID=H1AXK2_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:CDC85302.1}; TaxID=1262981 species="Bacteria; Firmicutes; Erysipelotrichia; Erysipelotrichales; Erysipelotrichaceae; environmental samples.;" source="Erysipelotrichaceae bacterium CAG:64.;"
filamentation induced by cAMP protein fic
L3_105_000G1_scaffold_125_3
[Clostridium] innocuum, Erysipelatoclostridium, Erysipelotrichales, Erysipelotrichia, Firmicutes, Bacteria

Not on your lists

comp(1245..1757)
DNA (513bp) protein (171aa)
acetolactate synthase, small subunit (EC:2.2.1.6)
Acetolactate synthase, small subunit n=7 Tax=Firmicutes RepID=E4LVU9_9CLOT
Acetolactate synthase, small subunit {ECO:0000313|EMBL:ENY88240.1}; TaxID=999413 species="Bacteria; Firmicutes; Erysipelotrichia; Erysipelotrichales; Erysipelotrichaceae; Erysipelatoclostridium.;" source="[Clostridium] innocuum 2959.;"
L3_105_000G1_scaffold_125_4
Erysipelotrichaceae bacterium CAG:64, Erysipelotrichales, Erysipelotrichia, Firmicutes, Bacteria

Not on your lists

comp(1792..3513)
DNA (1722bp) protein (574aa)
Acetolactate synthase {ECO:0000256|RuleBase:RU003591}; EC=2.2.1.6 {ECO:0000256|RuleBase:RU003591};; TaxID=1262981 species="Bacteria; Firmicutes; Erysipelotrichia; Erysipelotrichales; Erysipelotrichaceae; environmental samples.;" source="Erysipelotrichaceae bacterium CAG:64.;"
acetolactate synthase, large subunit, biosynthetic type (EC:2.2.1.6)
Acetolactate synthase n=5 Tax=Firmicutes RepID=E4LVV0_9CLOT
L3_105_000G1_scaffold_125_5
Peptoclostridium difficile, Peptoclostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(3804..4673)
DNA (870bp) protein (290aa)
Methionine aminopeptidase {ECO:0000256|HAMAP-Rule:MF_01974}; Short=MAP {ECO:0000256|HAMAP-Rule:MF_01974};; Short=MetAP {ECO:0000256|HAMAP-Rule:MF_01974};; EC=3.4.11.18 {ECO:0000256|HAMAP-Rule:MF_01974};; Peptidase M {ECO:0000256|HAMAP-Rule:MF_01974}; TaxID=1151410 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Peptostreptococcaceae; Peptoclostridium.;" source="Peptoclostridium difficile P28.;"
map; methionine aminopeptidase, type I (EC:3.4.11.18)
Methionine aminopeptidase n=4 Tax=Firmicutes RepID=E4LVV1_9CLOT
L3_105_000G1_scaffold_125_6
Peptoclostridium difficile, Peptoclostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

4886..6565
DNA (1680bp) protein (560aa)
Uncharacterized protein n=5 Tax=Firmicutes RepID=E4LVV2_9CLOT
Uncharacterized protein {ECO:0000313|EMBL:EQJ51610.1}; TaxID=1151410 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Peptostreptococcaceae; Peptoclostridium.;" source="Peptoclostridium difficile P28.;"
hypothetical protein
L3_105_000G1_scaffold_125_7
Erysipelotrichaceae bacterium 6_1_45, Erysipelotrichales, Erysipelotrichia, Firmicutes, Bacteria

Not on your lists

comp(6621..7499)
DNA (879bp) protein (293aa)
Uncharacterized protein n=6 Tax=Firmicutes RepID=E4LVV3_9CLOT
Uncharacterized protein {ECO:0000313|EMBL:EHO31994.1}; TaxID=469614 species="Bacteria; Firmicutes; Erysipelotrichia; Erysipelotrichales; Erysipelotrichaceae.;" source="Erysipelotrichaceae bacterium 6_1_45.;"
hypothetical protein
L3_105_000G1_scaffold_125_8
[Clostridium] innocuum, Erysipelatoclostridium, Erysipelotrichales, Erysipelotrichia, Firmicutes, Bacteria

Not on your lists

comp(7981..8868)
DNA (888bp) protein (296aa)
Tagatose-bisphosphate aldolase (EC:4.1.2.40)
Uncharacterized protein n=6 Tax=Firmicutes RepID=G1VVE1_9FIRM
Ketose-bisphosphate aldolase {ECO:0000313|EMBL:ENY88245.1}; TaxID=999413 species="Bacteria; Firmicutes; Erysipelotrichia; Erysipelotrichales; Erysipelotrichaceae; Erysipelatoclostridium.;" source="[Clostridium] innocuum 2959.;"
L3_105_000G1_scaffold_125_9
Peptoclostridium difficile, Peptoclostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(8887..9930)
DNA (1044bp) protein (348aa)
L-threonine 3-dehydrogenase (EC:1.1.1.103)
Uncharacterized protein n=3 Tax=Firmicutes RepID=H1B5J4_9FIRM
Zinc-binding dehydrogenase family protein {ECO:0000313|EMBL:EQJ51613.1}; TaxID=1151410 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Peptostreptococcaceae; Peptoclostridium.;" source="Peptoclostridium difficile P28.;"
L3_105_000G1_scaffold_125_10
Peptoclostridium difficile, Peptoclostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(9923..11083)
DNA (1161bp) protein (387aa)
Uncharacterized protein n=2 Tax=Firmicutes RepID=H1B5J3_9FIRM
Iron-containing alcohol dehydrogenase family protein {ECO:0000313|EMBL:EQJ51614.1}; TaxID=1151410 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Peptostreptococcaceae; Peptoclostridium.;" source="Peptoclostridium difficile P28.;"
alcohol dehydrogenase, class IV
L3_105_000G1_scaffold_125_11
Peptoclostridium difficile, Peptoclostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(11095..11931)
DNA (837bp) protein (279aa)
Uncharacterized protein n=4 Tax=Firmicutes RepID=H1AXL1_9FIRM
PTS system mannose/fructose/sorbose IID component family protein {ECO:0000313|EMBL:EQJ51615.1}; TaxID=1151410 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Peptostreptococcaceae; Peptoclostridium.;" source="Peptoclostridium difficile P28.;"
PTS system mannose/fructose/sorbose family IID component
L3_105_000G1_scaffold_125_12
Peptoclostridium difficile, Peptoclostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(11928..12683)
DNA (756bp) protein (252aa)
Uncharacterized protein n=2 Tax=Firmicutes RepID=H1B5J1_9FIRM
PTS system sorbose-specific iic component family protein {ECO:0000313|EMBL:EQJ51616.1}; TaxID=1151410 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Peptostreptococcaceae; Peptoclostridium.;" source="Peptoclostridium difficile P28.;"
Phosphotransferase system PTS sorbose-specific IIC subunit
L3_105_000G1_scaffold_125_13
Clostridium sp. HGF2, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(12699..13181)
DNA (483bp) protein (161aa)
PTS system sorbose subfamily IIB component n=1 Tax=Clostridium sp. HGF2 RepID=E4LVV9_9CLOT
PTS system sorbose subfamily IIB component {ECO:0000313|EMBL:EFR37212.1}; TaxID=908340 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium sp. HGF2.;"
PTS system sorbose subfamily IIB component
L3_105_000G1_scaffold_125_14
[Clostridium] innocuum, Erysipelatoclostridium, Erysipelotrichales, Erysipelotrichia, Firmicutes, Bacteria

Not on your lists

comp(13184..13585)
DNA (402bp) protein (134aa)
PTS system fructose IIA component n=7 Tax=Firmicutes RepID=E4LVW0_9CLOT
PTS system, mannose/fructose/sorbose family, IIA component {ECO:0000313|EMBL:ENY88251.1}; TaxID=999413 species="Bacteria; Firmicutes; Erysipelotrichia; Erysipelotrichales; Erysipelotrichaceae; Erysipelatoclostridium.;" source="[Clostridium] innocuum 2959.;"
PTS system fructose subfamily IIA component
L3_105_000G1_scaffold_125_15
Clostridium sp. HGF2, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

13861..16296
DNA (2436bp) protein (812aa)
PRD domain protein n=3 Tax=Firmicutes RepID=E4LVW1_9CLOT
PRD domain protein {ECO:0000313|EMBL:EFR37016.1}; TaxID=908340 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium sp. HGF2.;"
sigma-54 interacting domain-containing protein
L3_105_000G1_scaffold_125_16
[Clostridium] innocuum, Erysipelatoclostridium, Erysipelotrichales, Erysipelotrichia, Firmicutes, Bacteria

Not on your lists

comp(16896..17345)
DNA (450bp) protein (150aa)
Uncharacterized protein n=2 Tax=unclassified Erysipelotrichaceae RepID=G1VVF0_9FIRM
PTS mannitol transporter subunit IIA {ECO:0000313|EMBL:KGJ53996.1}; TaxID=1522 species="Bacteria; Firmicutes; Erysipelotrichia; Erysipelotrichales; Erysipelotrichaceae; Erysipelatoclostridium.;" source="Clostridium innocuum.;"
phosphoenolpyruvate-dependent sugar phosphotransferase system EIIA 2
L3_105_000G1_scaffold_125_17
[Clostridium] innocuum, Erysipelatoclostridium, Erysipelotrichales, Erysipelotrichia, Firmicutes, Bacteria

Not on your lists

comp(17342..18757)
DNA (1416bp) protein (472aa)
Uncharacterized protein n=2 Tax=unclassified Erysipelotrichaceae RepID=G1VVF1_9FIRM
PTS system mannitol-specific transporter subunit IIBC {ECO:0000313|EMBL:KGJ53995.1}; TaxID=1522 species="Bacteria; Firmicutes; Erysipelotrichia; Erysipelotrichales; Erysipelotrichaceae; Erysipelatoclostridium.;" source="Clostridium innocuum.;"
PTS system lactose/cellobiose-specific transporter subunit IIB
L3_105_000G1_scaffold_125_18
[Clostridium] innocuum, Erysipelatoclostridium, Erysipelotrichales, Erysipelotrichia, Firmicutes, Bacteria

Not on your lists

comp(18811..19344)
DNA (534bp) protein (178aa)
Uncharacterized protein n=2 Tax=unclassified Erysipelotrichaceae RepID=G1VVF2_9FIRM
6-phospho 3-hexuloisomerase {ECO:0000313|EMBL:KGJ53994.1}; TaxID=1522 species="Bacteria; Firmicutes; Erysipelotrichia; Erysipelotrichales; Erysipelotrichaceae; Erysipelatoclostridium.;" source="Clostridium innocuum.;"
6-phospho 3-hexuloisomerase domain protein
L3_105_000G1_scaffold_125_19
[Clostridium] innocuum, Erysipelatoclostridium, Erysipelotrichales, Erysipelotrichia, Firmicutes, Bacteria

Not on your lists

comp(19346..20251)
DNA (906bp) protein (302aa)
Uncharacterized protein n=2 Tax=unclassified Erysipelotrichaceae RepID=G1VVF3_9FIRM
6-phosphogluconate dehydrogenase {ECO:0000313|EMBL:KGJ53993.1}; TaxID=1522 species="Bacteria; Firmicutes; Erysipelotrichia; Erysipelotrichales; Erysipelotrichaceae; Erysipelatoclostridium.;" source="Clostridium innocuum.;"
6-phosphogluconate dehydrogenase
L3_105_000G1_scaffold_125_20
[Clostridium] innocuum, Erysipelatoclostridium, Erysipelotrichales, Erysipelotrichia, Firmicutes, Bacteria

Not on your lists

comp(20273..21139)
DNA (867bp) protein (289aa)
Uncharacterized protein n=2 Tax=unclassified Erysipelotrichaceae RepID=G1VVF4_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:KGJ53992.1}; TaxID=1522 species="Bacteria; Firmicutes; Erysipelotrichia; Erysipelotrichales; Erysipelotrichaceae; Erysipelatoclostridium.;" source="Clostridium innocuum.;"
RpiR family transcriptional regulator
L3_105_000G1_scaffold_125_21
[Clostridium] innocuum, Erysipelatoclostridium, Erysipelotrichales, Erysipelotrichia, Firmicutes, Bacteria

Not on your lists

comp(21668..23338)
DNA (1671bp) protein (557aa)
Formate--tetrahydrofolate ligase {ECO:0000256|HAMAP-Rule:MF_01543}; EC=6.3.4.3 {ECO:0000256|HAMAP-Rule:MF_01543};; Formyltetrahydrofolate synthetase {ECO:0000256|HAMAP-Rule:MF_01543}; TaxID=1522 species="Bacteria; Firmicutes; Erysipelotrichia; Erysipelotrichales; Erysipelotrichaceae; Erysipelatoclostridium.;" source="Clostridium innocuum.;"
Formate-tetrahydrofolate ligase (EC:6.3.4.3)
Formate--tetrahydrofolate ligase n=2 Tax=unclassified Erysipelotrichaceae RepID=G1VVF5_9FIRM
L3_105_000G1_scaffold_125_22
Clostridium sp. HGF2, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(23390..24622)
DNA (1233bp) protein (411aa)
Phosphoribosylamine--glycine ligase {ECO:0000256|HAMAP-Rule:MF_00138}; EC=6.3.4.13 {ECO:0000256|HAMAP-Rule:MF_00138};; GARS {ECO:0000256|HAMAP-Rule:MF_00138}; Glycinamide ribonucleotide synthetase {ECO:0000256|HAMAP-Rule:MF_00138}; Phosphoribosylglycinamide synthetase {ECO:0000256|HAMAP-Rule:MF_00138}; TaxID=908340 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium sp. HGF2.;"
phosphoribosylamine--glycine ligase (EC:6.3.4.13)
Phosphoribosylamine--glycine ligase n=3 Tax=Firmicutes RepID=E4LVW4_9CLOT
L3_105_000G1_scaffold_125_23
Peptoclostridium difficile, Peptoclostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(24841..25551)
DNA (711bp) protein (237aa)
Uncharacterized protein n=4 Tax=Firmicutes RepID=E4LVW5_9CLOT
Uncharacterized protein {ECO:0000313|EMBL:EQJ51625.1}; TaxID=1151410 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Peptostreptococcaceae; Peptoclostridium.;" source="Peptoclostridium difficile P28.;"
L3_105_000G1_scaffold_125_24
Erysipelotrichaceae bacterium CAG:64, Erysipelotrichales, Erysipelotrichia, Firmicutes, Bacteria

Not on your lists

comp(25538..26266)
DNA (729bp) protein (243aa)
Uncharacterized protein n=2 Tax=Firmicutes RepID=R6ULH4_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:CDC85320.1}; TaxID=1262981 species="Bacteria; Firmicutes; Erysipelotrichia; Erysipelotrichales; Erysipelotrichaceae; environmental samples.;" source="Erysipelotrichaceae bacterium CAG:64.;"
L3_105_000G1_scaffold_125_25
Peptoclostridium difficile, Peptoclostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(26263..27006)
DNA (744bp) protein (248aa)
Uncharacterized protein n=1 Tax=Clostridium difficile P28 RepID=T4N8I5_CLODI
Uncharacterized protein {ECO:0000313|EMBL:EQJ51627.1}; TaxID=1151410 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Peptostreptococcaceae; Peptoclostridium.;" source="Peptoclostridium difficile P28.;"
L3_105_000G1_scaffold_125_26
Peptoclostridium difficile, Peptoclostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(27003..27698)
DNA (696bp) protein (232aa)
Uncharacterized protein n=1 Tax=Clostridium difficile P28 RepID=T4N2M8_CLODI
Uncharacterized protein {ECO:0000313|EMBL:EQJ51628.1}; TaxID=1151410 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Peptostreptococcaceae; Peptoclostridium.;" source="Peptoclostridium difficile P28.;"
L3_105_000G1_scaffold_125_27
[Clostridium] innocuum, Erysipelatoclostridium, Erysipelotrichales, Erysipelotrichia, Firmicutes, Bacteria

Not on your lists

comp(27711..28157)
DNA (447bp) protein (149aa)
Uncharacterized protein n=7 Tax=Firmicutes RepID=G1VVG2_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:ENY88266.1}; TaxID=999413 species="Bacteria; Firmicutes; Erysipelotrichia; Erysipelotrichales; Erysipelotrichaceae; Erysipelatoclostridium.;" source="[Clostridium] innocuum 2959.;"
lytR; Sensory transduction protein LytR
L3_105_000G1_scaffold_125_28
Erysipelotrichaceae bacterium 6_1_45, Erysipelotrichales, Erysipelotrichia, Firmicutes, Bacteria

Not on your lists

28331..28540
DNA (210bp) protein (70aa)
DNA-binding helix-turn-helix protein n=7 Tax=Firmicutes RepID=E4LVX0_9CLOT
Uncharacterized protein {ECO:0000313|EMBL:EHO31977.1}; TaxID=469614 species="Bacteria; Firmicutes; Erysipelotrichia; Erysipelotrichales; Erysipelotrichaceae.;" source="Erysipelotrichaceae bacterium 6_1_45.;"
transcriptional regulator
L3_105_000G1_scaffold_125_29
Peptoclostridium difficile, Peptoclostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

28537..28953
DNA (417bp) protein (139aa)
Uncharacterized protein n=4 Tax=Firmicutes RepID=H1AXM5_9FIRM
Putative membrane protein {ECO:0000313|EMBL:EQJ51631.1}; TaxID=1151410 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Peptostreptococcaceae; Peptoclostridium.;" source="Peptoclostridium difficile P28.;"
L3_105_000G1_scaffold_125_30
Peptoclostridium difficile, Peptoclostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

29177..30283
DNA (1107bp) protein (369aa)
Uncharacterized protein n=4 Tax=Firmicutes RepID=E4LVX3_9CLOT
Serine hydrolase family protein {ECO:0000313|EMBL:EQJ51633.1}; TaxID=1151410 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Peptostreptococcaceae; Peptoclostridium.;" source="Peptoclostridium difficile P28.;"
hypothetical protein
Displaying items 1-30 of 116 in total

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