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L3_105_000G1_scaffold_128

Search features with annotation key words

Displaying items 1-30 of 115 in total
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
L3_105_000G1_scaffold_128_1
Lachnospiraceae bacterium 7_1_58FAA, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

1..84
DNA (84bp) protein (28aa)
Uncharacterized protein n=1 Tax=Clostridium sp. ATCC BAA-442 RepID=U2BNZ2_9CLOT
Uncharacterized protein {ECO:0000313|EMBL:EHO26660.1}; TaxID=658087 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae.;" source="Lachnospiraceae bacterium 7_1_58FAA.;"
L3_105_000G1_scaffold_128_2
Flavonifractor plautii, Flavonifractor, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists


148..1896
DNA (1749bp) protein (583aa)
Arginine--tRNA ligase {ECO:0000256|HAMAP-Rule:MF_00123}; EC=6.1.1.19 {ECO:0000256|HAMAP-Rule:MF_00123};; Arginyl-tRNA synthetase {ECO:0000256|HAMAP-Rule:MF_00123}; TaxID=411475 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Flavonifractor.;" source="Flavonifractor plautii ATCC 29863.;"
argS; arginyl-tRNA synthetase (EC:6.1.1.19)
Arginine--tRNA ligase n=1 Tax=Flavonifractor plautii ATCC 29863 RepID=G9YR89_9FIRM
L3_105_000G1_scaffold_128_3
Lachnospiraceae bacterium 7_1_58FAA, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

2149..3426
DNA (1278bp) protein (426aa)
Putative uncharacterized protein n=1 Tax=Lachnospiraceae bacterium 7_1_58FAA RepID=H1CJX7_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:EHO26662.1}; TaxID=658087 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae.;" source="Lachnospiraceae bacterium 7_1_58FAA.;"
hypothetical protein
L3_105_000G1_scaffold_128_4

Not on your lists

comp(3597..3851)
DNA (255bp) protein (85aa)
sugar ABC transporter permease n=1 Tax=Clostridium difficile RepID=UPI00035D3B2E
Protease {ECO:0000313|EMBL:EKC78433.1}; TaxID=408170 species="unclassified sequences; metagenomes; organismal metagenomes.;" source="human gut metagenome.;"
hypothetical protein
L3_105_000G1_scaffold_128_5
Lachnospiraceae bacterium 7_1_58FAA, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

4722..5969
DNA (1248bp) protein (416aa)
Homocysteine S-methyltransferase n=3 Tax=Clostridiales RepID=G9YUK5_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:EHO26663.1}; TaxID=658087 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae.;" source="Lachnospiraceae bacterium 7_1_58FAA.;"
hypothetical protein
L3_105_000G1_scaffold_128_6
Lachnospiraceae bacterium 7_1_58FAA, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

6188..8509
DNA (2322bp) protein (774aa)
ribonucleoside-triphosphate reductase class III catalytic subunit (EC:1.17.4.2)
Anaerobic ribonucleoside-triphosphate reductase n=1 Tax=Lachnospiraceae bacterium 7_1_58FAA RepID=H1CJX9_9FIRM
Anaerobic ribonucleoside-triphosphate reductase {ECO:0000313|EMBL:EHO26664.1}; TaxID=658087 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae.;" source="Lachnospiraceae bacterium 7_1_58FAA.;"
L3_105_000G1_scaffold_128_7
Clostridium sp. ATCC BAA-442, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

8760..9965
DNA (1206bp) protein (402aa)
SAM-dependent methyltransferase (EC:2.1.1.-)
Putative 23S rRNA methyltransferase n=1 Tax=Clostridium sp. ATCC BAA-442 RepID=U2DH57_9CLOT
Putative 23S rRNA methyltransferase {ECO:0000313|EMBL:ERI78941.1}; TaxID=649724 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium sp. ATCC BAA-442.;"
L3_105_000G1_scaffold_128_8
Flavonifractor plautii, Flavonifractor, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

10021..10548
DNA (528bp) protein (176aa)
Anaerobic ribonucleoside-triphosphate reductase-activating protein {ECO:0000256|PIRNR:PIRNR000368}; EC=1.97.1.- {ECO:0000256|PIRNR:PIRNR000368};; TaxID=411475 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Flavonifractor.;" source="Flavonifractor plautii ATCC 29863.;"
Anaerobic ribonucleoside-triphosphate reductase-activating protein n=1 Tax=Flavonifractor plautii ATCC 29863 RepID=G9YUL0_9FIRM
anaerobic ribonucleoside-triphosphate reductase activating protein
L3_105_000G1_scaffold_128_9
Lachnospiraceae bacterium 7_1_58FAA, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(10704..10925)
DNA (222bp) protein (74aa)
Uncharacterized protein n=3 Tax=Clostridiales RepID=G9YUL1_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:EHO22623.1}; TaxID=658087 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae.;" source="Lachnospiraceae bacterium 7_1_58FAA.;"
L3_105_000G1_scaffold_128_10
Lachnospiraceae bacterium 7_1_58FAA, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

10994..11224
DNA (231bp) protein (77aa)
DNA-binding helix-turn-helix protein n=2 Tax=Clostridiales RepID=U2C339_9CLOT
Uncharacterized protein {ECO:0000313|EMBL:EHO22624.1}; TaxID=658087 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae.;" source="Lachnospiraceae bacterium 7_1_58FAA.;"
XRE family transcriptional regulator
L3_105_000G1_scaffold_128_11
Flavonifractor plautii, Flavonifractor, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

11211..11834
DNA (624bp) protein (208aa)
cat-1; chloramphenicol acetyltransferase (EC:2.3.1.28)
Chloramphenicol O-acetyltransferase n=1 Tax=Flavonifractor plautii ATCC 29863 RepID=G9YUL3_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:KGF55021.1}; TaxID=742738 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Flavonifractor.;" source="Clostridium orbiscindens 1_3_50AFAA.;"
L3_105_000G1_scaffold_128_12
Lachnospiraceae bacterium 7_1_58FAA, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

11831..12442
DNA (612bp) protein (204aa)
Hydrolase, NUDIX family n=2 Tax=Clostridiales RepID=U2DBT3_9CLOT
Uncharacterized protein {ECO:0000313|EMBL:EHO22626.1}; TaxID=658087 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae.;" source="Lachnospiraceae bacterium 7_1_58FAA.;"
putative hydrolase
L3_105_000G1_scaffold_128_13
Clostridium sp. ATCC BAA-442, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

12439..13086
DNA (648bp) protein (216aa)
Methyltransferase small domain protein n=1 Tax=Clostridium sp. ATCC BAA-442 RepID=U2C4F3_9CLOT
Methyltransferase small domain protein {ECO:0000313|EMBL:ERI78928.1}; TaxID=649724 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium sp. ATCC BAA-442.;"
putative methyltransferase
L3_105_000G1_scaffold_128_14
Clostridium sp. ATCC BAA-442, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

13092..13937
DNA (846bp) protein (282aa)
Ribosomal RNA small subunit methyltransferase I {ECO:0000256|HAMAP-Rule:MF_01877}; EC=2.1.1.198 {ECO:0000256|HAMAP-Rule:MF_01877};; 16S rRNA 2'-O-ribose C1402 methyltransferase {ECO:0000256|HAMAP-Rule:MF_01877}; rRNA (cytidine-2'-O-)-methyltransferase RsmI {ECO:0000256|HAMAP-Rule:MF_01877}; TaxID=649724 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium sp. ATCC BAA-442.;"
Ribosomal RNA small subunit methyltransferase I n=2 Tax=Clostridiales RepID=H1CLU0_9FIRM
putative methyltransferase
L3_105_000G1_scaffold_128_15
Clostridium sp. ATCC BAA-442, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(14118..14360)
DNA (243bp) protein (81aa)
Transcriptional regulator, AbrB family n=3 Tax=Clostridiales RepID=G9YUL8_9FIRM
Transcriptional regulator, AbrB family {ECO:0000313|EMBL:ERI78931.1}; TaxID=649724 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium sp. ATCC BAA-442.;"
AbrB family transcriptional regulator
L3_105_000G1_scaffold_128_16
Lachnospiraceae bacterium 7_1_58FAA, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

14590..15168
DNA (579bp) protein (193aa)
Putative spore maturation protein A n=2 Tax=Clostridiales RepID=U2C4F7_9CLOT
Uncharacterized protein {ECO:0000313|EMBL:EHO22630.1}; TaxID=658087 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae.;" source="Lachnospiraceae bacterium 7_1_58FAA.;"
spmA; spore maturation protein A
L3_105_000G1_scaffold_128_17
Flavonifractor plautii, Flavonifractor, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

15171..15692
DNA (522bp) protein (174aa)
Putative spore maturation protein B n=3 Tax=Clostridiales RepID=G9YUM0_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:KGF55027.1}; TaxID=742738 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Flavonifractor.;" source="Clostridium orbiscindens 1_3_50AFAA.;"
spmB; spore maturation protein B
L3_105_000G1_scaffold_128_18
Flavonifractor plautii, Flavonifractor, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(15770..15979)
DNA (210bp) protein (70aa)
Uncharacterized protein n=2 Tax=Clostridiales RepID=G9YUM1_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:EHM42015.1}; TaxID=411475 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Flavonifractor.;" source="Flavonifractor plautii ATCC 29863.;"
hypothetical protein
L3_105_000G1_scaffold_128_19
Flavonifractor plautii, Flavonifractor, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(16010..17197)
DNA (1188bp) protein (396aa)
Sporulation integral membrane protein YlbJ n=3 Tax=Clostridiales RepID=H1CLU5_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:KGF55029.1}; TaxID=742738 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Flavonifractor.;" source="Clostridium orbiscindens 1_3_50AFAA.;"
nucleoside recognition
L3_105_000G1_scaffold_128_20
Flavonifractor plautii, Flavonifractor, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

17336..17713
DNA (378bp) protein (126aa)
Uncharacterized protein n=2 Tax=Clostridiales RepID=G9YUM3_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:KGF55030.1}; TaxID=742738 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Flavonifractor.;" source="Clostridium orbiscindens 1_3_50AFAA.;"
putative Cytosolic Protein
L3_105_000G1_scaffold_128_21
Lachnospiraceae bacterium 7_1_58FAA, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

17720..18346
DNA (627bp) protein (209aa)
Putative uncharacterized protein n=2 Tax=Clostridiales RepID=H1CLU7_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:EHO22635.1}; TaxID=658087 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae.;" source="Lachnospiraceae bacterium 7_1_58FAA.;"
hypothetical protein
L3_105_000G1_scaffold_128_22
Lachnospiraceae bacterium 7_1_58FAA, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(18634..19230)
DNA (597bp) protein (199aa)
Putative uncharacterized protein n=1 Tax=Lachnospiraceae bacterium 7_1_58FAA RepID=H1CLU8_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:EHO22636.1}; TaxID=658087 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae.;" source="Lachnospiraceae bacterium 7_1_58FAA.;"
TetR family transcriptional regulator
L3_105_000G1_scaffold_128_23
Clostridium sp. ATCC BAA-442, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

19330..20205
DNA (876bp) protein (292aa)
EDD domain protein, DegV family n=1 Tax=Clostridium sp. ATCC BAA-442 RepID=U2AAY1_9CLOT
EDD domain protein, DegV family {ECO:0000313|EMBL:ERI62969.1}; TaxID=649724 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium sp. ATCC BAA-442.;"
DegV family protein
L3_105_000G1_scaffold_128_24
Clostridium sp. ATCC BAA-442, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(20244..20975)
DNA (732bp) protein (244aa)
Peptidase, M24 family n=1 Tax=Clostridium sp. ATCC BAA-442 RepID=U2AU95_9CLOT
Peptidase, M24 family {ECO:0000313|EMBL:ERI62968.1}; TaxID=649724 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium sp. ATCC BAA-442.;"
Xaa-Pro aminopeptidase
L3_105_000G1_scaffold_128_25
Flavonifractor plautii, Flavonifractor, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(21417..23171)
DNA (1755bp) protein (585aa)
hndD; NADP-reducing hydrogenase subunit HndC (EC:1.12.1.3)
Putative ferredoxin hydrogenase HydA1 n=1 Tax=Flavonifractor plautii ATCC 29863 RepID=G9YUM8_9FIRM
Putative ferredoxin hydrogenase HydA1 {ECO:0000313|EMBL:EHM42022.1}; TaxID=411475 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Flavonifractor.;" source="Flavonifractor plautii ATCC 29863.;"
L3_105_000G1_scaffold_128_26
Flavonifractor plautii, Flavonifractor, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(23186..24988)
DNA (1803bp) protein (601aa)
hndC; NADP-reducing hydrogenase subunit HndC (EC:1.12.1.3)
Protein HymB n=1 Tax=Flavonifractor plautii ATCC 29863 RepID=G9YUM9_9FIRM
Protein HymB {ECO:0000313|EMBL:EHM42023.1}; TaxID=411475 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Flavonifractor.;" source="Flavonifractor plautii ATCC 29863.;"
L3_105_000G1_scaffold_128_27
Flavonifractor plautii, Flavonifractor, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(25002..25370)
DNA (369bp) protein (123aa)
Uncharacterized protein n=3 Tax=Clostridiales RepID=G9YUN0_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:EHM42024.1}; TaxID=411475 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Flavonifractor.;" source="Flavonifractor plautii ATCC 29863.;"
hypothetical protein
L3_105_000G1_scaffold_128_28
Lachnospiraceae bacterium 7_1_58FAA, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(25375..25926)
DNA (552bp) protein (184aa)
Histidine kinase {ECO:0000256|SAAS:SAAS00251121}; EC=2.7.13.3 {ECO:0000256|SAAS:SAAS00251121};; TaxID=658087 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae.;" source="Lachnospiraceae bacterium 7_1_58FAA.;"
Putative uncharacterized protein n=1 Tax=Lachnospiraceae bacterium 7_1_58FAA RepID=H1CLV4_9FIRM
hypothetical protein
L3_105_000G1_scaffold_128_29
Lachnospiraceae bacterium 7_1_58FAA, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(26633..27127)
DNA (495bp) protein (165aa)
NADH-quinone oxidoreductase, E subunit n=2 Tax=Clostridiales RepID=G9YPQ0_9FIRM
NADH-quinone oxidoreductase, E subunit {ECO:0000313|EMBL:EHO22643.1}; TaxID=658087 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae.;" source="Lachnospiraceae bacterium 7_1_58FAA.;"
hypothetical protein
L3_105_000G1_scaffold_128_30
Clostridium sp. ATCC BAA-442, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(27414..28124)
DNA (711bp) protein (237aa)
PHP domain protein n=1 Tax=Clostridium sp. ATCC BAA-442 RepID=U2AQ97_9CLOT
PHP domain protein {ECO:0000313|EMBL:ERI62270.1}; TaxID=649724 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium sp. ATCC BAA-442.;"
Predicted metal-dependent phosphoesterases (PHP family)
Displaying items 1-30 of 115 in total

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